RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 DEFB132Q7Z7B7 95 aa26.84■■□□□ 1.89
TRAPPC3-209ENST00000616395 NPHP3Q7Z494 1330 aa26.82■■□□□ 1.88
TRAPPC3-209ENST00000616395 CLTCL1P53675 1640 aa26.82■■□□□ 1.88
TRAPPC3-209ENST00000616395 PXDNQ92626 1479 aa26.82■■□□□ 1.88
TRAPPC3-209ENST00000616395 MARF1Q9Y4F3 1742 aaKnown RBP26.81■■□□□ 1.88
TRAPPC3-209ENST00000616395 XPCQ01831 940 aaPredicted RBP26.81■■□□□ 1.88
TRAPPC3-209ENST00000616395 ESCO1Q5FWF5 840 aa26.81■■□□□ 1.88
TRAPPC3-209ENST00000616395 RALGAPBQ86X10 1494 aa26.79■■□□□ 1.88
TRAPPC3-209ENST00000616395 PRAG1Q86YV5 1406 aa26.78■■□□□ 1.88
TRAPPC3-209ENST00000616395 GLI3P10071 1580 aa26.78■■□□□ 1.88
TRAPPC3-209ENST00000616395 FOXO3O43524 673 aa26.77■■□□□ 1.88
TRAPPC3-209ENST00000616395 UNC5CLQ8IV45 518 aa26.77■■□□□ 1.88
TRAPPC3-209ENST00000616395 HFM1A2PYH4 1435 aa26.77■■□□□ 1.88
TRAPPC3-209ENST00000616395 LRP5O75197 1615 aa26.77■■□□□ 1.88
TRAPPC3-209ENST00000616395 ITGAEP38570 1179 aa26.76■■□□□ 1.87
TRAPPC3-209ENST00000616395 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.76■■□□□ 1.87
TRAPPC3-209ENST00000616395 VGFO15240 615 aaPredicted RBP26.74■■□□□ 1.87
TRAPPC3-209ENST00000616395 SF3B2Q13435 895 aaKnown RBP26.74■■□□□ 1.87
TRAPPC3-209ENST00000616395 SLIT2O94813 1529 aa26.73■■□□□ 1.87
TRAPPC3-209ENST00000616395 CDC42BPGQ6DT37 1551 aa26.72■■□□□ 1.87
TRAPPC3-209ENST00000616395 BRWD3Q6RI45 1802 aa26.7■■□□□ 1.87
TRAPPC3-209ENST00000616395 KIF1BO60333 1816 aa26.7■■□□□ 1.86
TRAPPC3-209ENST00000616395 SEPT12Q8IYM1 358 aa26.69■■□□□ 1.86
TRAPPC3-209ENST00000616395 LRPPRCP42704 1394 aaKnown RBP26.69■■□□□ 1.86
TRAPPC3-209ENST00000616395 NUTM2FA1L443 756 aa26.67■■□□□ 1.86
TRAPPC3-209ENST00000616395 PSDA5PKW4 1024 aaPredicted RBP26.67■■□□□ 1.86
TRAPPC3-209ENST00000616395 SPATA31A3Q5VYP0 1347 aa26.64■■□□□ 1.86
TRAPPC3-209ENST00000616395 NAIPQ13075 1403 aa26.64■■□□□ 1.85
TRAPPC3-209ENST00000616395 HRCP23327 699 aa26.63■■□□□ 1.85
TRAPPC3-209ENST00000616395 USP32Q8NFA0 1604 aa26.62■■□□□ 1.85
TRAPPC3-209ENST00000616395 VPS72Q15906 364 aa26.61■■□□□ 1.85
TRAPPC3-209ENST00000616395 KRT27Q7Z3Y8 459 aa26.61■■□□□ 1.85
TRAPPC3-209ENST00000616395 RPGRIP1LQ68CZ1 1315 aa26.6■■□□□ 1.85
TRAPPC3-209ENST00000616395 ONECUT3O60422 494 aaPredicted RBP26.6■■□□□ 1.85
TRAPPC3-209ENST00000616395 CCDC9Q9Y3X0 531 aaKnown RBP26.59■■□□□ 1.85
TRAPPC3-209ENST00000616395 WAPLQ7Z5K2 1190 aa26.58■■□□□ 1.85
TRAPPC3-209ENST00000616395 BAG6P46379 1132 aa26.57■■□□□ 1.84
TRAPPC3-209ENST00000616395 HAP1P54257 671 aaPredicted RBP26.57■■□□□ 1.84
TRAPPC3-209ENST00000616395 CCDC144AA2RUR9 1427 aa26.56■■□□□ 1.84
TRAPPC3-209ENST00000616395 KRT28Q7Z3Y7 464 aa26.56■■□□□ 1.84
TRAPPC3-209ENST00000616395 STK26Q9P289 416 aa26.56■■□□□ 1.84
TRAPPC3-209ENST00000616395 CABLES1Q8TDN4 633 aa26.55■■□□□ 1.84
TRAPPC3-209ENST00000616395 PPLO60437 1756 aa26.54■■□□□ 1.84
TRAPPC3-209ENST00000616395 PLEKHG5O94827 1062 aa26.54■■□□□ 1.84
TRAPPC3-209ENST00000616395 PPARGC1BQ86YN6 1023 aaKnown RBP26.54■■□□□ 1.84
TRAPPC3-209ENST00000616395 PLCH1Q4KWH8 1693 aa26.52■■□□□ 1.84
TRAPPC3-209ENST00000616395 KIF1AQ12756 1690 aa26.52■■□□□ 1.84
TRAPPC3-209ENST00000616395 A0A0G2JS52 829 aa26.51■■□□□ 1.83
TRAPPC3-209ENST00000616395 MYT1Q01538 1121 aa26.51■■□□□ 1.83
TRAPPC3-209ENST00000616395 PLEKHH1Q9ULM0 1364 aa26.51■■□□□ 1.83
TRAPPC3-209ENST00000616395 TECPR2O15040 1411 aa26.51■■□□□ 1.83
TRAPPC3-209ENST00000616395 TNS3Q68CZ2 1445 aa26.5■■□□□ 1.83
TRAPPC3-209ENST00000616395 NWD2Q9ULI1 1742 aa26.5■■□□□ 1.83
TRAPPC3-209ENST00000616395 FMN2Q9NZ56 1722 aa26.49■■□□□ 1.83
TRAPPC3-209ENST00000616395 ADGRF5Q8IZF2 1346 aa26.48■■□□□ 1.83
TRAPPC3-209ENST00000616395 EN1Q05925 392 aaPredicted RBP26.48■■□□□ 1.83
TRAPPC3-209ENST00000616395 R3HDM1Q15032 1099 aaKnown RBP26.47■■□□□ 1.83
TRAPPC3-209ENST00000616395 FAM83GA6ND36 823 aa26.45■■□□□ 1.83
TRAPPC3-209ENST00000616395 FAM98CQ17RN3 349 aaKnown RBP26.45■■□□□ 1.83
TRAPPC3-209ENST00000616395 ABCC11Q96J66 1382 aa26.45■■□□□ 1.82
TRAPPC3-209ENST00000616395 PSME1Q06323 249 aa26.44■■□□□ 1.82
TRAPPC3-209ENST00000616395 TMEM132EQ6IEE7 984 aa26.44■■□□□ 1.82
TRAPPC3-209ENST00000616395 LMOD2Q6P5Q4 547 aa26.43■■□□□ 1.82
TRAPPC3-209ENST00000616395 PHF8Q9UPP1 1060 aa26.43■■□□□ 1.82
TRAPPC3-209ENST00000616395 RRBP1Q9P2E9 1410 aaKnown RBP26.42■■□□□ 1.82
TRAPPC3-209ENST00000616395 ABCA3Q99758 1704 aa26.42■■□□□ 1.82
TRAPPC3-209ENST00000616395 FAM182BQ5T319 152 aa26.41■■□□□ 1.82
TRAPPC3-209ENST00000616395 SBNO1A3KN83 1393 aa26.4■■□□□ 1.82
TRAPPC3-209ENST00000616395 KNDC1Q76NI1 1749 aa26.4■■□□□ 1.82
TRAPPC3-209ENST00000616395 RGPD1P0DJD0 1748 aa26.39■■□□□ 1.81
TRAPPC3-209ENST00000616395 SLC4A1APQ9BWU0 796 aaKnown RBP26.39■■□□□ 1.81
TRAPPC3-209ENST00000616395 ARHGEF10O15013 1369 aa26.38■■□□□ 1.81
TRAPPC3-209ENST00000616395 BTG4Q9NY30 223 aa26.37■■□□□ 1.81
TRAPPC3-209ENST00000616395 NRAPQ86VF7 1730 aa26.37■■□□□ 1.81
TRAPPC3-209ENST00000616395 RGPD8O14715 1765 aaPredicted RBP26.36■■□□□ 1.81
TRAPPC3-209ENST00000616395 NRXN1Q9ULB1 1477 aa26.36■■□□□ 1.81
TRAPPC3-209ENST00000616395 RGL3Q3MIN7 710 aa26.36■■□□□ 1.81
TRAPPC3-209ENST00000616395 DISP2A7MBM2 1401 aa26.35■■□□□ 1.81
TRAPPC3-209ENST00000616395 YTHDC2Q9H6S0 1430 aaKnown RBP26.35■■□□□ 1.81
TRAPPC3-209ENST00000616395 EZH2Q15910 746 aaKnown RBP26.34■■□□□ 1.81
TRAPPC3-209ENST00000616395 IFT172Q9UG01 1749 aa26.34■■□□□ 1.81
TRAPPC3-209ENST00000616395 YY1P25490 414 aa26.33■■□□□ 1.81
TRAPPC3-209ENST00000616395 ANKRD30BQ9BXX2 1392 aa26.31■■□□□ 1.8
TRAPPC3-209ENST00000616395 TNS1Q9HBL0 1735 aaKnown RBP26.31■■□□□ 1.8
TRAPPC3-209ENST00000616395 PIK3C2GO75747 1445 aa26.3■■□□□ 1.8
TRAPPC3-209ENST00000616395 SIRT1Q96EB6 747 aa26.3■■□□□ 1.8
TRAPPC3-209ENST00000616395 SPATA31E1Q6ZUB1 1445 aa26.29■■□□□ 1.8
TRAPPC3-209ENST00000616395 PMFBP1Q8TBY8 1022 aa26.29■■□□□ 1.8
TRAPPC3-209ENST00000616395 SPATA31A5Q5VU36 1347 aa26.29■■□□□ 1.8
TRAPPC3-209ENST00000616395 SPATA31A7Q8IWB4 1347 aa26.29■■□□□ 1.8
TRAPPC3-209ENST00000616395 CAMKK2Q96RR4 588 aa26.27■■□□□ 1.8
TRAPPC3-209ENST00000616395 COL14A1Q05707 1796 aaKnown RBP26.27■■□□□ 1.8
TRAPPC3-209ENST00000616395 THSD7AQ9UPZ6 1657 aa26.26■■□□□ 1.79
TRAPPC3-209ENST00000616395 SAFB2Q14151 953 aaKnown RBP eCLIP26.25■■□□□ 1.79
TRAPPC3-209ENST00000616395 TRIM37O94972 964 aa26.24■■□□□ 1.79
TRAPPC3-209ENST00000616395 ADGRB2O60241 1585 aa26.23■■□□□ 1.79
TRAPPC3-209ENST00000616395 PRAM1Q96QH2 718 aa26.21■■□□□ 1.79
TRAPPC3-209ENST00000616395 TRPM3Q9HCF6 1732 aaPredicted RBP26.21■■□□□ 1.79
TRAPPC3-209ENST00000616395 APBA3O96018 575 aa26.2■■□□□ 1.79
TRAPPC3-209ENST00000616395 ANKARQ7Z5J8 1434 aa26.2■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms