RNA–Protein interactions for RNA: ENST00000616030.4

LINC00649-217, long intergenic non-protein coding RNA 649, humanhuman

TSL 5 BASIC

Gene LINC00649, Length 714 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-217ENST00000616030 KIAA1210Q9ULL0 1709 aa15.25■□□□□ 0.03
LINC00649-217ENST00000616030 FMN2Q9NZ56 1722 aa15.24■□□□□ 0.03
LINC00649-217ENST00000616030 ILDR2Q71H61 639 aa15.24■□□□□ 0.03
LINC00649-217ENST00000616030 SPATA31A6Q5VVP1 1343 aa15.21■□□□□ 0.03
LINC00649-217ENST00000616030 PLEKHH1Q9ULM0 1364 aa15.21■□□□□ 0.02
LINC00649-217ENST00000616030 CFAP70Q5T0N1 1121 aa15.2■□□□□ 0.02
LINC00649-217ENST00000616030 TMEM132EQ6IEE7 984 aa15.2■□□□□ 0.02
LINC00649-217ENST00000616030 LRP6O75581 1613 aa15.2■□□□□ 0.02
LINC00649-217ENST00000616030 KIF1AQ12756 1690 aa15.19■□□□□ 0.02
LINC00649-217ENST00000616030 COL22A1Q8NFW1 1626 aaPredicted RBP15.18■□□□□ 0.02
LINC00649-217ENST00000616030 ARHGEF28Q8N1W1 1705 aaKnown RBP15.18■□□□□ 0.02
LINC00649-217ENST00000616030 SOS2Q07890 1332 aaPredicted RBP15.17■□□□□ 0.02
LINC00649-217ENST00000616030 PXDNQ92626 1479 aa15.17■□□□□ 0.02
LINC00649-217ENST00000616030 PNPLA6Q8IY17 1366 aa15.16■□□□□ 0.02
LINC00649-217ENST00000616030 WAPLQ7Z5K2 1190 aa15.16■□□□□ 0.02
LINC00649-217ENST00000616030 DCAF11Q8TEB1 546 aa15.16■□□□□ 0.02
LINC00649-217ENST00000616030 RGS17Q9UGC6 210 aaPredicted RBP15.16■□□□□ 0.02
LINC00649-217ENST00000616030 STK26Q9P289 416 aa15.15■□□□□ 0.02
LINC00649-217ENST00000616030 ANKARQ7Z5J8 1434 aa15.15■□□□□ 0.02
LINC00649-217ENST00000616030 USP32Q8NFA0 1604 aa15.14■□□□□ 0.01
LINC00649-217ENST00000616030 SOCS7O14512 581 aa15.14■□□□□ 0.01
LINC00649-217ENST00000616030 LRRC59Q96AG4 307 aaKnown RBP15.14■□□□□ 0.01
LINC00649-217ENST00000616030 ORAI2Q96SN7 254 aa15.13■□□□□ 0.01
LINC00649-217ENST00000616030 NPHP3Q7Z494 1330 aa15.12■□□□□ 0.01
LINC00649-217ENST00000616030 PRAM1Q96QH2 718 aa15.11■□□□□ 0.01
LINC00649-217ENST00000616030 TULP4Q9NRJ4 1543 aa15.11■□□□□ 0.01
LINC00649-217ENST00000616030 RGPD8O14715 1765 aaPredicted RBP15.11■□□□□ 0.01
LINC00649-217ENST00000616030 EIF3AQ14152 1382 aaKnown RBP15.1■□□□□ 0.01
LINC00649-217ENST00000616030 CCER1Q8TC90 406 aaPredicted RBP15.09■□□□□ 0.01
LINC00649-217ENST00000616030 DDX17Q92841 729 aaKnown RBP15.09■□□□□ 0.01
LINC00649-217ENST00000616030 KDM2AQ9Y2K7 1162 aa15.09■□□□□ 0.01
LINC00649-217ENST00000616030 TRPM1Q7Z4N2 1603 aa15.09■□□□□ 0.01
LINC00649-217ENST00000616030 ITSN1Q15811 1721 aa15.07■□□□□ 0
LINC00649-217ENST00000616030 TOPAZ1Q8N9V7 1692 aa15.06■□□□□ 0
LINC00649-217ENST00000616030 MARF1Q9Y4F3 1742 aaKnown RBP15.06■□□□□ 0
LINC00649-217ENST00000616030 ESCO1Q5FWF5 840 aa15.06■□□□□ 0
LINC00649-217ENST00000616030 TRAK1Q9UPV9 953 aa15.06■□□□□ 0
LINC00649-217ENST00000616030 ATP7BP35670 1465 aa15.06■□□□□ 0
LINC00649-217ENST00000616030 TRPM3Q9HCF6 1732 aaPredicted RBP15.06■□□□□ 0
LINC00649-217ENST00000616030 ZEB1P37275 1124 aaPredicted RBP15.05■□□□□ -0
LINC00649-217ENST00000616030 POTEAQ6S8J7 498 aa15.05■□□□□ -0
LINC00649-217ENST00000616030 SBNO1A3KN83 1393 aa15.04■□□□□ -0
LINC00649-217ENST00000616030 POGKQ9P215 609 aa15.04■□□□□ -0
LINC00649-217ENST00000616030 CDK12Q9NYV4 1490 aaPredicted RBP15.03■□□□□ -0
LINC00649-217ENST00000616030 L3MBTL2Q969R5 705 aa15.03■□□□□ -0
LINC00649-217ENST00000616030 ABCA3Q99758 1704 aa15.03■□□□□ -0
LINC00649-217ENST00000616030 ALS2Q96Q42 1657 aa15.03■□□□□ -0
LINC00649-217ENST00000616030 TNS3Q68CZ2 1445 aa15.02■□□□□ -0
LINC00649-217ENST00000616030 GPRASP1Q5JY77 1395 aa15.02■□□□□ -0
LINC00649-217ENST00000616030 SPATA31A3Q5VYP0 1347 aa15.02■□□□□ -0
LINC00649-217ENST00000616030 WASLO00401 505 aaPredicted RBP15.02■□□□□ -0
LINC00649-217ENST00000616030 FOXO3O43524 673 aa15.02■□□□□ -0
LINC00649-217ENST00000616030 ZNF772Q68DY9 489 aaPredicted RBP15.02■□□□□ -0
LINC00649-217ENST00000616030 PHF8Q9UPP1 1060 aa15.02■□□□□ -0
LINC00649-217ENST00000616030 PRR36Q9H6K5 1346 aa15.01□□□□□ -0.01
LINC00649-217ENST00000616030 CLSPNQ9HAW4 1339 aa15.01□□□□□ -0.01
LINC00649-217ENST00000616030 TNKS1BP1Q9C0C2 1729 aaKnown RBP15□□□□□ -0.01
LINC00649-217ENST00000616030 QRICH2Q9H0J4 1663 aa15□□□□□ -0.01
LINC00649-217ENST00000616030 SAFB2Q14151 953 aaKnown RBP eCLIP15□□□□□ -0.01
LINC00649-217ENST00000616030 NBPF1Q3BBV0 1214 aa15□□□□□ -0.01
LINC00649-217ENST00000616030 SIN3AQ96ST3 1273 aa15□□□□□ -0.01
LINC00649-217ENST00000616030 NUTM2FA1L443 756 aa14.99□□□□□ -0.01
LINC00649-217ENST00000616030 MEX3CQ5U5Q3 659 aaKnown RBP14.99□□□□□ -0.01
LINC00649-217ENST00000616030 CRYBG1Q9Y4K1 1723 aa14.99□□□□□ -0.01
LINC00649-217ENST00000616030 MINK1Q8N4C8 1332 aaPredicted RBP14.98□□□□□ -0.01
LINC00649-217ENST00000616030 POLR3AO14802 1390 aaPredicted RBP14.98□□□□□ -0.01
LINC00649-217ENST00000616030 ARHGEF10O15013 1369 aa14.98□□□□□ -0.01
LINC00649-217ENST00000616030 AFF2P51816 1311 aa14.97□□□□□ -0.01
LINC00649-217ENST00000616030 FNBP4Q8N3X1 1017 aaPredicted RBP14.97□□□□□ -0.01
LINC00649-217ENST00000616030 HIRIP3Q9BW71 556 aaPredicted RBP14.97□□□□□ -0.01
LINC00649-217ENST00000616030 RALGAPBQ86X10 1494 aa14.96□□□□□ -0.01
LINC00649-217ENST00000616030 NUTM2BA6NNL0 878 aaPredicted RBP14.96□□□□□ -0.01
LINC00649-217ENST00000616030 NUTM2EB1AL46 878 aaPredicted RBP14.96□□□□□ -0.01
LINC00649-217ENST00000616030 PSME1Q06323 249 aa14.96□□□□□ -0.01
LINC00649-217ENST00000616030 KRT28Q7Z3Y7 464 aa14.96□□□□□ -0.01
LINC00649-217ENST00000616030 NUTM2AQ8IVF1 878 aaPredicted RBP14.96□□□□□ -0.01
LINC00649-217ENST00000616030 SBNO2Q9Y2G9 1366 aa14.96□□□□□ -0.02
LINC00649-217ENST00000616030 CENPJQ9HC77 1338 aaPredicted RBP14.95□□□□□ -0.02
LINC00649-217ENST00000616030 SLIT2O94813 1529 aa14.95□□□□□ -0.02
LINC00649-217ENST00000616030 NWD2Q9ULI1 1742 aa14.95□□□□□ -0.02
LINC00649-217ENST00000616030 XPCQ01831 940 aaPredicted RBP14.94□□□□□ -0.02
LINC00649-217ENST00000616030 BCL9LQ86UU0 1499 aa14.94□□□□□ -0.02
LINC00649-217ENST00000616030 ATRNO75882 1429 aa14.93□□□□□ -0.02
LINC00649-217ENST00000616030 C8orf37Q96NL8 207 aa14.93□□□□□ -0.02
LINC00649-217ENST00000616030 ROCK2O75116 1388 aaKnown RBP14.93□□□□□ -0.02
LINC00649-217ENST00000616030 NUDT16Q96DE0 195 aaKnown RBP14.92□□□□□ -0.02
LINC00649-217ENST00000616030 PLCH1Q4KWH8 1693 aa14.91□□□□□ -0.02
LINC00649-217ENST00000616030 BRD4O60885 1362 aaPredicted RBP14.91□□□□□ -0.02
LINC00649-217ENST00000616030 PLEKHG3A1L390 1219 aa14.91□□□□□ -0.02
LINC00649-217ENST00000616030 NEUROD1Q13562 356 aa14.91□□□□□ -0.02
LINC00649-217ENST00000616030 NBPF8Q3BBV2 869 aa14.91□□□□□ -0.02
LINC00649-217ENST00000616030 CDK19Q9BWU1 502 aa14.91□□□□□ -0.02
LINC00649-217ENST00000616030 CCDC61Q9Y6R9 512 aa14.91□□□□□ -0.02
LINC00649-217ENST00000616030 TONSLQ96HA7 1378 aa14.9□□□□□ -0.02
LINC00649-217ENST00000616030 PMFBP1Q8TBY8 1022 aa14.9□□□□□ -0.02
LINC00649-217ENST00000616030 RGS12O14924 1447 aa14.9□□□□□ -0.02
LINC00649-217ENST00000616030 PHRF1Q9P1Y6 1649 aaKnown RBP14.89□□□□□ -0.03
LINC00649-217ENST00000616030 ADAMTS2O95450 1211 aa14.89□□□□□ -0.03
LINC00649-217ENST00000616030 RXRBP28702 533 aa14.89□□□□□ -0.03
LINC00649-217ENST00000616030 NRAPQ86VF7 1730 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms