RNA–Protein interactions for RNA: ENST00000615732.1

COL4A1-205, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 5

Gene COL4A1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-205ENST00000615732 SOS2Q07890 1332 aaPredicted RBP15.68■□□□□ 0.1
COL4A1-205ENST00000615732 RAB3GAP2Q9H2M9 1393 aa15.68■□□□□ 0.1
COL4A1-205ENST00000615732 VGFO15240 615 aaPredicted RBP15.68■□□□□ 0.1
COL4A1-205ENST00000615732 CDC42BPGQ6DT37 1551 aa15.66■□□□□ 0.1
COL4A1-205ENST00000615732 NGLY1Q96IV0 654 aa15.66■□□□□ 0.1
COL4A1-205ENST00000615732 SRCAPQ6ZRS2 3230 aa15.66■□□□□ 0.1
COL4A1-205ENST00000615732 DHX57Q6P158 1386 aaKnown RBP15.65■□□□□ 0.1
COL4A1-205ENST00000615732 CCDC144AA2RUR9 1427 aa15.64■□□□□ 0.09
COL4A1-205ENST00000615732 MYOM2P54296 1465 aa15.64■□□□□ 0.09
COL4A1-205ENST00000615732 RPGRIP1LQ68CZ1 1315 aa15.64■□□□□ 0.09
COL4A1-205ENST00000615732 ADGRF5Q8IZF2 1346 aa15.64■□□□□ 0.09
COL4A1-205ENST00000615732 CLSPNQ9HAW4 1339 aa15.64■□□□□ 0.09
COL4A1-205ENST00000615732 ATRNO75882 1429 aa15.63■□□□□ 0.09
COL4A1-205ENST00000615732 RGL3Q3MIN7 710 aa15.63■□□□□ 0.09
COL4A1-205ENST00000615732 USP21Q9UK80 565 aa15.63■□□□□ 0.09
COL4A1-205ENST00000615732 EP400Q96L91 3159 aa15.63■□□□□ 0.09
COL4A1-205ENST00000615732 PXDNQ92626 1479 aa15.63■□□□□ 0.09
COL4A1-205ENST00000615732 ATAD2Q6PL18 1390 aa15.62■□□□□ 0.09
COL4A1-205ENST00000615732 MARF1Q9Y4F3 1742 aaKnown RBP15.62■□□□□ 0.09
COL4A1-205ENST00000615732 SPATA31E1Q6ZUB1 1445 aa15.61■□□□□ 0.09
COL4A1-205ENST00000615732 FNBP4Q8N3X1 1017 aaPredicted RBP15.61■□□□□ 0.09
COL4A1-205ENST00000615732 TRPC5Q9UL62 973 aaPredicted RBP15.61■□□□□ 0.09
COL4A1-205ENST00000615732 STK26Q9P289 416 aa15.6■□□□□ 0.09
COL4A1-205ENST00000615732 IFT172Q9UG01 1749 aa15.59■□□□□ 0.09
COL4A1-205ENST00000615732 KNDC1Q76NI1 1749 aa15.58■□□□□ 0.08
COL4A1-205ENST00000615732 NUTM2FA1L443 756 aa15.58■□□□□ 0.08
COL4A1-205ENST00000615732 XPCQ01831 940 aaPredicted RBP15.58■□□□□ 0.08
COL4A1-205ENST00000615732 MPHOSPH9Q99550 1183 aa15.58■□□□□ 0.08
COL4A1-205ENST00000615732 NPHP3Q7Z494 1330 aa15.58■□□□□ 0.08
COL4A1-205ENST00000615732 PLEKHH1Q9ULM0 1364 aa15.58■□□□□ 0.08
COL4A1-205ENST00000615732 TECPR2O15040 1411 aa15.58■□□□□ 0.08
COL4A1-205ENST00000615732 BCL9LQ86UU0 1499 aa15.58■□□□□ 0.08
COL4A1-205ENST00000615732 ESCO1Q5FWF5 840 aa15.57■□□□□ 0.08
COL4A1-205ENST00000615732 WAPLQ7Z5K2 1190 aa15.57■□□□□ 0.08
COL4A1-205ENST00000615732 TMEM132EQ6IEE7 984 aa15.56■□□□□ 0.08
COL4A1-205ENST00000615732 LRPPRCP42704 1394 aaKnown RBP15.56■□□□□ 0.08
COL4A1-205ENST00000615732 PIK3C2GO75747 1445 aa15.56■□□□□ 0.08
COL4A1-205ENST00000615732 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.56■□□□□ 0.08
COL4A1-205ENST00000615732 FMN2Q9NZ56 1722 aa15.55■□□□□ 0.08
COL4A1-205ENST00000615732 ANKRD30BQ9BXX2 1392 aa15.55■□□□□ 0.08
COL4A1-205ENST00000615732 FOXO3O43524 673 aa15.54■□□□□ 0.08
COL4A1-205ENST00000615732 KIF1AQ12756 1690 aa15.54■□□□□ 0.08
COL4A1-205ENST00000615732 GLI3P10071 1580 aa15.53■□□□□ 0.08
COL4A1-205ENST00000615732 YTHDC2Q9H6S0 1430 aaKnown RBP15.52■□□□□ 0.08
COL4A1-205ENST00000615732 USP32Q8NFA0 1604 aa15.51■□□□□ 0.07
COL4A1-205ENST00000615732 SLIT2O94813 1529 aa15.51■□□□□ 0.07
COL4A1-205ENST00000615732 ABCC11Q96J66 1382 aa15.5■□□□□ 0.07
COL4A1-205ENST00000615732 GJD4Q96KN9 370 aaPredicted RBP15.5■□□□□ 0.07
COL4A1-205ENST00000615732 RALGAPBQ86X10 1494 aa15.5■□□□□ 0.07
COL4A1-205ENST00000615732 SPATA31A3Q5VYP0 1347 aa15.48■□□□□ 0.07
COL4A1-205ENST00000615732 ACIN1Q9UKV3 1341 aaKnown RBP15.48■□□□□ 0.07
COL4A1-205ENST00000615732 ABCA3Q99758 1704 aa15.48■□□□□ 0.07
COL4A1-205ENST00000615732 RGPD8O14715 1765 aaPredicted RBP15.47■□□□□ 0.07
COL4A1-205ENST00000615732 SAFB2Q14151 953 aaKnown RBP eCLIP15.47■□□□□ 0.07
COL4A1-205ENST00000615732 CFAP70Q5T0N1 1121 aa15.47■□□□□ 0.07
COL4A1-205ENST00000615732 ZRANB1Q9UGI0 708 aa15.47■□□□□ 0.07
COL4A1-205ENST00000615732 BRWD3Q6RI45 1802 aa15.47■□□□□ 0.07
COL4A1-205ENST00000615732 PLCH1Q4KWH8 1693 aa15.47■□□□□ 0.07
COL4A1-205ENST00000615732 NRXN1Q9ULB1 1477 aa15.46■□□□□ 0.07
COL4A1-205ENST00000615732 UNC5CLQ8IV45 518 aa15.46■□□□□ 0.07
COL4A1-205ENST00000615732 TNS3Q68CZ2 1445 aa15.45■□□□□ 0.06
COL4A1-205ENST00000615732 PLEKHG5O94827 1062 aa15.45■□□□□ 0.06
COL4A1-205ENST00000615732 CCDC125Q86Z20 511 aa15.45■□□□□ 0.06
COL4A1-205ENST00000615732 C14orf93Q9H972 538 aaKnown RBP15.44■□□□□ 0.06
COL4A1-205ENST00000615732 BLMP54132 1417 aaPredicted RBP15.43■□□□□ 0.06
COL4A1-205ENST00000615732 NWD2Q9ULI1 1742 aa15.43■□□□□ 0.06
COL4A1-205ENST00000615732 KRT28Q7Z3Y7 464 aa15.43■□□□□ 0.06
COL4A1-205ENST00000615732 PRAM1Q96QH2 718 aa15.43■□□□□ 0.06
COL4A1-205ENST00000615732 PHF8Q9UPP1 1060 aa15.41■□□□□ 0.06
COL4A1-205ENST00000615732 CABLES1Q8TDN4 633 aa15.4■□□□□ 0.06
COL4A1-205ENST00000615732 SIRT1Q96EB6 747 aa15.4■□□□□ 0.06
COL4A1-205ENST00000615732 SBNO1A3KN83 1393 aa15.39■□□□□ 0.05
COL4A1-205ENST00000615732 DEFB132Q7Z7B7 95 aa15.39■□□□□ 0.05
COL4A1-205ENST00000615732 ADGRB1O14514 1584 aa15.39■□□□□ 0.05
COL4A1-205ENST00000615732 ADGRB2O60241 1585 aa15.39■□□□□ 0.05
COL4A1-205ENST00000615732 NRAPQ86VF7 1730 aa15.39■□□□□ 0.05
COL4A1-205ENST00000615732 TRPM3Q9HCF6 1732 aaPredicted RBP15.38■□□□□ 0.05
COL4A1-205ENST00000615732 HAP1P54257 671 aaPredicted RBP15.38■□□□□ 0.05
COL4A1-205ENST00000615732 VPS72Q15906 364 aa15.38■□□□□ 0.05
COL4A1-205ENST00000615732 LMOD2Q6P5Q4 547 aa15.38■□□□□ 0.05
COL4A1-205ENST00000615732 SEPT12Q8IYM1 358 aa15.38■□□□□ 0.05
COL4A1-205ENST00000615732 HIRIP3Q9BW71 556 aaPredicted RBP15.38■□□□□ 0.05
COL4A1-205ENST00000615732 POGKQ9P215 609 aa15.38■□□□□ 0.05
COL4A1-205ENST00000615732 DLC1Q96QB1 1528 aa15.38■□□□□ 0.05
COL4A1-205ENST00000615732 PSME1Q06323 249 aa15.37■□□□□ 0.05
COL4A1-205ENST00000615732 PMFBP1Q8TBY8 1022 aa15.37■□□□□ 0.05
COL4A1-205ENST00000615732 ARHGEF10O15013 1369 aa15.36■□□□□ 0.05
COL4A1-205ENST00000615732 ANKARQ7Z5J8 1434 aa15.36■□□□□ 0.05
COL4A1-205ENST00000615732 TRAK1Q9UPV9 953 aa15.36■□□□□ 0.05
COL4A1-205ENST00000615732 KDM2AQ9Y2K7 1162 aa15.36■□□□□ 0.05
COL4A1-205ENST00000615732 MINK1Q8N4C8 1332 aaPredicted RBP15.36■□□□□ 0.05
COL4A1-205ENST00000615732 ALS2Q96Q42 1657 aa15.35■□□□□ 0.05
COL4A1-205ENST00000615732 NEUROD1Q13562 356 aa15.35■□□□□ 0.05
COL4A1-205ENST00000615732 LRP5O75197 1615 aa15.35■□□□□ 0.05
COL4A1-205ENST00000615732 ONECUT3O60422 494 aaPredicted RBP15.34■□□□□ 0.05
COL4A1-205ENST00000615732 CCDC9Q9Y3X0 531 aaKnown RBP15.34■□□□□ 0.05
COL4A1-205ENST00000615732 CRYBG1Q9Y4K1 1723 aa15.34■□□□□ 0.05
COL4A1-205ENST00000615732 FAM83GA6ND36 823 aa15.33■□□□□ 0.04
COL4A1-205ENST00000615732 KRT27Q7Z3Y8 459 aa15.33■□□□□ 0.04
COL4A1-205ENST00000615732 DCAF11Q8TEB1 546 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms