RNA–Protein interactions for RNA: ENST00000615317.4

MMP28-205, Transcript of matrix metallopeptidase 28, humanhuman

TSL 2

Gene MMP28, Length 436 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-205ENST00000615317 SAFB2Q14151 953 aaKnown RBP eCLIP12.86□□□□□ -0.35
MMP28-205ENST00000615317 USP32Q8NFA0 1604 aa12.86□□□□□ -0.35
MMP28-205ENST00000615317 RGPD8O14715 1765 aaPredicted RBP12.86□□□□□ -0.35
MMP28-205ENST00000615317 HSPA5P11021 654 aaKnown RBP12.85□□□□□ -0.35
MMP28-205ENST00000615317 EIF4G2P78344 907 aaKnown RBP eCLIP12.85□□□□□ -0.35
MMP28-205ENST00000615317 TMEM94Q12767 1356 aa12.84□□□□□ -0.35
MMP28-205ENST00000615317 SBNO2Q9Y2G9 1366 aa12.84□□□□□ -0.35
MMP28-205ENST00000615317 WAPLQ7Z5K2 1190 aa12.84□□□□□ -0.35
MMP28-205ENST00000615317 RBM33Q96EV2 1170 aaKnown RBP12.84□□□□□ -0.35
MMP28-205ENST00000615317 HIRIP3Q9BW71 556 aaPredicted RBP12.84□□□□□ -0.35
MMP28-205ENST00000615317 ST20-MTHFSA0A0A6YYL1 179 aa12.83□□□□□ -0.36
MMP28-205ENST00000615317 POGKQ9P215 609 aa12.83□□□□□ -0.36
MMP28-205ENST00000615317 MINK1Q8N4C8 1332 aaPredicted RBP12.83□□□□□ -0.36
MMP28-205ENST00000615317 DISP3Q9P2K9 1392 aa12.82□□□□□ -0.36
MMP28-205ENST00000615317 ATP7BP35670 1465 aa12.81□□□□□ -0.36
MMP28-205ENST00000615317 C14orf37Q86TY3 774 aa12.8□□□□□ -0.36
MMP28-205ENST00000615317 PROSER2Q86WR7 435 aaPredicted RBP12.8□□□□□ -0.36
MMP28-205ENST00000615317 TESK2Q96S53 571 aa12.79□□□□□ -0.36
MMP28-205ENST00000615317 KIF1AQ12756 1690 aa12.79□□□□□ -0.36
MMP28-205ENST00000615317 DCCP43146 1447 aa12.79□□□□□ -0.36
MMP28-205ENST00000615317 AKAP12Q02952 1782 aa12.78□□□□□ -0.36
MMP28-205ENST00000615317 MSH6P52701 1360 aa12.78□□□□□ -0.36
MMP28-205ENST00000615317 MON2Q7Z3U7 1717 aa12.77□□□□□ -0.36
MMP28-205ENST00000615317 SIRT1Q96EB6 747 aa12.77□□□□□ -0.37
MMP28-205ENST00000615317 NCOA3Q9Y6Q9 1424 aa12.77□□□□□ -0.37
MMP28-205ENST00000615317 MST1RQ04912 1400 aa12.75□□□□□ -0.37
MMP28-205ENST00000615317 IQSEC2Q5JU85 1478 aa12.75□□□□□ -0.37
MMP28-205ENST00000615317 NRKQ7Z2Y5 1582 aa12.75□□□□□ -0.37
MMP28-205ENST00000615317 ROBO1Q9Y6N7 1651 aa12.75□□□□□ -0.37
MMP28-205ENST00000615317 ANKARQ7Z5J8 1434 aa12.74□□□□□ -0.37
MMP28-205ENST00000615317 EVC2Q86UK5 1308 aa12.74□□□□□ -0.37
MMP28-205ENST00000615317 TMF1P82094 1093 aa12.74□□□□□ -0.37
MMP28-205ENST00000615317 CCDC7Q96M83 1385 aa12.73□□□□□ -0.37
MMP28-205ENST00000615317 KIF7Q2M1P5 1343 aa12.73□□□□□ -0.37
MMP28-205ENST00000615317 SRPK2P78362 688 aaKnown RBP12.73□□□□□ -0.37
MMP28-205ENST00000615317 POLR3GLQ9BT43 218 aa12.73□□□□□ -0.37
MMP28-205ENST00000615317 NHSL1Q5SYE7 1610 aa12.73□□□□□ -0.37
MMP28-205ENST00000615317 KIF20BQ96Q89 1820 aa12.72□□□□□ -0.37
MMP28-205ENST00000615317 PRR36Q9H6K5 1346 aa12.72□□□□□ -0.37
MMP28-205ENST00000615317 NUTM2FA1L443 756 aa12.72□□□□□ -0.37
MMP28-205ENST00000615317 WASLO00401 505 aaPredicted RBP12.72□□□□□ -0.37
MMP28-205ENST00000615317 CABP2Q9NPB3 220 aa12.72□□□□□ -0.37
MMP28-205ENST00000615317 C1orf167Q5SNV9 1468 aa12.72□□□□□ -0.37
MMP28-205ENST00000615317 PPIP5K1Q6PFW1 1433 aa12.71□□□□□ -0.37
MMP28-205ENST00000615317 ATAD2Q6PL18 1390 aa12.71□□□□□ -0.37
MMP28-205ENST00000615317 WASHC2AQ641Q2 1341 aa12.71□□□□□ -0.37
MMP28-205ENST00000615317 C11orf95C9JLR9 678 aaPredicted RBP12.71□□□□□ -0.37
MMP28-205ENST00000615317 CDK19Q9BWU1 502 aa12.71□□□□□ -0.37
MMP28-205ENST00000615317 TRPM3Q9HCF6 1732 aaPredicted RBP12.69□□□□□ -0.38
MMP28-205ENST00000615317 ATF3P18847 181 aa12.69□□□□□ -0.38
MMP28-205ENST00000615317 C19orf44Q9H6X5 657 aa12.69□□□□□ -0.38
MMP28-205ENST00000615317 CD163L1Q9NR16 1453 aa12.68□□□□□ -0.38
MMP28-205ENST00000615317 ZNF316A6NFI3 1004 aaPredicted RBP12.68□□□□□ -0.38
MMP28-205ENST00000615317 ANKRD26Q9UPS8 1709 aa12.68□□□□□ -0.38
MMP28-205ENST00000615317 CDCA8Q53HL2 280 aa12.67□□□□□ -0.38
MMP28-205ENST00000615317 CADPS2Q86UW7 1296 aa12.67□□□□□ -0.38
MMP28-205ENST00000615317 PHLPP1O60346 1717 aa12.67□□□□□ -0.38
MMP28-205ENST00000615317 NINLQ9Y2I6 1382 aa12.67□□□□□ -0.38
MMP28-205ENST00000615317 NUDT16Q96DE0 195 aaKnown RBP12.66□□□□□ -0.38
MMP28-205ENST00000615317 A0A1W2PP64 1363 aa12.66□□□□□ -0.38
MMP28-205ENST00000615317 AHDC1Q5TGY3 1603 aaPredicted RBP12.66□□□□□ -0.38
MMP28-205ENST00000615317 PIK3C2AO00443 1686 aa12.65□□□□□ -0.38
MMP28-205ENST00000615317 SLC24A1O60721 1099 aa12.65□□□□□ -0.38
MMP28-205ENST00000615317 CERKQ8TCT0 537 aa12.65□□□□□ -0.38
MMP28-205ENST00000615317 MARF1Q9Y4F3 1742 aaKnown RBP12.65□□□□□ -0.38
MMP28-205ENST00000615317 ALS2Q96Q42 1657 aa12.64□□□□□ -0.39
MMP28-205ENST00000615317 TMC1Q8TDI8 760 aa12.64□□□□□ -0.39
MMP28-205ENST00000615317 ABCA3Q99758 1704 aa12.64□□□□□ -0.39
MMP28-205ENST00000615317 COL16A1Q07092 1604 aaPredicted RBP12.63□□□□□ -0.39
MMP28-205ENST00000615317 ANKRD36BQ8N2N9 1353 aa12.63□□□□□ -0.39
MMP28-205ENST00000615317 USP54Q70EL1 1684 aa12.63□□□□□ -0.39
MMP28-205ENST00000615317 NSD3Q9BZ95 1437 aa12.62□□□□□ -0.39
MMP28-205ENST00000615317 PXDNQ92626 1479 aa12.62□□□□□ -0.39
MMP28-205ENST00000615317 ESCO1Q5FWF5 840 aa12.62□□□□□ -0.39
MMP28-205ENST00000615317 PMFBP1Q8TBY8 1022 aa12.62□□□□□ -0.39
MMP28-205ENST00000615317 ORAI2Q96SN7 254 aa12.62□□□□□ -0.39
MMP28-205ENST00000615317 CRYBG1Q9Y4K1 1723 aa12.62□□□□□ -0.39
MMP28-205ENST00000615317 USP6P35125 1406 aa12.62□□□□□ -0.39
MMP28-205ENST00000615317 POLR3AO14802 1390 aaPredicted RBP12.61□□□□□ -0.39
MMP28-205ENST00000615317 PUS7Q96PZ0 661 aaKnown RBP12.61□□□□□ -0.39
MMP28-205ENST00000615317 CABP1Q9NZU7 370 aa12.61□□□□□ -0.39
MMP28-205ENST00000615317 CCDC61Q9Y6R9 512 aa12.61□□□□□ -0.39
MMP28-205ENST00000615317 PHRF1Q9P1Y6 1649 aaKnown RBP12.61□□□□□ -0.39
MMP28-205ENST00000615317 CPSF1Q10570 1443 aaKnown RBP12.61□□□□□ -0.39
MMP28-205ENST00000615317 SCAF1Q9H7N4 1312 aaKnown RBP12.61□□□□□ -0.39
MMP28-205ENST00000615317 UBAP1LF5GYI3 381 aa12.6□□□□□ -0.39
MMP28-205ENST00000615317 BRINP3Q76B58 766 aa12.6□□□□□ -0.39
MMP28-205ENST00000615317 SLC12A5Q9H2X9 1139 aa12.6□□□□□ -0.39
MMP28-205ENST00000615317 PHF8Q9UPP1 1060 aa12.6□□□□□ -0.39
MMP28-205ENST00000615317 KTN1Q86UP2 1357 aaKnown RBP12.59□□□□□ -0.39
MMP28-205ENST00000615317 SLAIN2Q9P270 581 aa12.59□□□□□ -0.39
MMP28-205ENST00000615317 EDC4Q6P2E9 1401 aaKnown RBP12.59□□□□□ -0.39
MMP28-205ENST00000615317 ACEP12821 1306 aa12.59□□□□□ -0.39
MMP28-205ENST00000615317 PIP4K2BP78356 416 aa12.58□□□□□ -0.4
MMP28-205ENST00000615317 XPCQ01831 940 aaPredicted RBP12.58□□□□□ -0.4
MMP28-205ENST00000615317 DDX17Q92841 729 aaKnown RBP12.58□□□□□ -0.4
MMP28-205ENST00000615317 MED1Q15648 1581 aaPredicted RBP12.57□□□□□ -0.4
MMP28-205ENST00000615317 TOM1O60784 492 aa12.57□□□□□ -0.4
MMP28-205ENST00000615317 HDGFL2Q7Z4V5 671 aaPredicted RBP12.57□□□□□ -0.4
MMP28-205ENST00000615317 NGDNQ8NEJ9 315 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms