RNA–Protein interactions for RNA: ENST00000614502.4

PDLIM2-218, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-218ENST00000614502 RGL3Q3MIN7 710 aa18■□□□□ 0.47
PDLIM2-218ENST00000614502 QTRT2Q9H974 415 aaKnown RBP17.99■□□□□ 0.47
PDLIM2-218ENST00000614502 SOS2Q07890 1332 aaPredicted RBP17.98■□□□□ 0.47
PDLIM2-218ENST00000614502 KNDC1Q76NI1 1749 aa17.97■□□□□ 0.47
PDLIM2-218ENST00000614502 ADGRF5Q8IZF2 1346 aa17.97■□□□□ 0.47
PDLIM2-218ENST00000614502 CDC42BPGQ6DT37 1551 aa17.96■□□□□ 0.46
PDLIM2-218ENST00000614502 COL22A1Q8NFW1 1626 aaPredicted RBP17.95■□□□□ 0.46
PDLIM2-218ENST00000614502 RBM6P78332 1123 aaKnown RBP17.95■□□□□ 0.46
PDLIM2-218ENST00000614502 NGLY1Q96IV0 654 aa17.95■□□□□ 0.46
PDLIM2-218ENST00000614502 LRPPRCP42704 1394 aaKnown RBP17.93■□□□□ 0.46
PDLIM2-218ENST00000614502 TECPR2O15040 1411 aa17.93■□□□□ 0.46
PDLIM2-218ENST00000614502 PIK3C2GO75747 1445 aa17.93■□□□□ 0.46
PDLIM2-218ENST00000614502 MARF1Q9Y4F3 1742 aaKnown RBP17.92■□□□□ 0.46
PDLIM2-218ENST00000614502 PXDNQ92626 1479 aa17.92■□□□□ 0.46
PDLIM2-218ENST00000614502 ABCC11Q96J66 1382 aa17.91■□□□□ 0.46
PDLIM2-218ENST00000614502 RAB3GAP2Q9H2M9 1393 aa17.91■□□□□ 0.46
PDLIM2-218ENST00000614502 MYOM2P54296 1465 aa17.9■□□□□ 0.46
PDLIM2-218ENST00000614502 XPCQ01831 940 aaPredicted RBP17.9■□□□□ 0.46
PDLIM2-218ENST00000614502 ESCO1Q5FWF5 840 aa17.9■□□□□ 0.46
PDLIM2-218ENST00000614502 WAPLQ7Z5K2 1190 aa17.9■□□□□ 0.46
PDLIM2-218ENST00000614502 STK26Q9P289 416 aa17.9■□□□□ 0.46
PDLIM2-218ENST00000614502 USP21Q9UK80 565 aa17.9■□□□□ 0.46
PDLIM2-218ENST00000614502 NUTM2FA1L443 756 aa17.89■□□□□ 0.45
PDLIM2-218ENST00000614502 SIRT1Q96EB6 747 aa17.89■□□□□ 0.45
PDLIM2-218ENST00000614502 PLEKHH1Q9ULM0 1364 aa17.89■□□□□ 0.45
PDLIM2-218ENST00000614502 NPHP3Q7Z494 1330 aa17.88■□□□□ 0.45
PDLIM2-218ENST00000614502 RGPD8O14715 1765 aaPredicted RBP17.88■□□□□ 0.45
PDLIM2-218ENST00000614502 ATRNO75882 1429 aa17.88■□□□□ 0.45
PDLIM2-218ENST00000614502 YTHDC2Q9H6S0 1430 aaKnown RBP17.88■□□□□ 0.45
PDLIM2-218ENST00000614502 FMN2Q9NZ56 1722 aa17.87■□□□□ 0.45
PDLIM2-218ENST00000614502 FOXO3O43524 673 aa17.87■□□□□ 0.45
PDLIM2-218ENST00000614502 HRCP23327 699 aa17.87■□□□□ 0.45
PDLIM2-218ENST00000614502 TMEM132EQ6IEE7 984 aa17.87■□□□□ 0.45
PDLIM2-218ENST00000614502 FNBP4Q8N3X1 1017 aaPredicted RBP17.87■□□□□ 0.45
PDLIM2-218ENST00000614502 C14orf93Q9H972 538 aaKnown RBP17.87■□□□□ 0.45
PDLIM2-218ENST00000614502 DHX57Q6P158 1386 aaKnown RBP17.87■□□□□ 0.45
PDLIM2-218ENST00000614502 NRXN1Q9ULB1 1477 aa17.87■□□□□ 0.45
PDLIM2-218ENST00000614502 EP400Q96L91 3159 aa17.87■□□□□ 0.45
PDLIM2-218ENST00000614502 TRPC5Q9UL62 973 aaPredicted RBP17.86■□□□□ 0.45
PDLIM2-218ENST00000614502 KIF1AQ12756 1690 aa17.84■□□□□ 0.45
PDLIM2-218ENST00000614502 BCL9LQ86UU0 1499 aa17.84■□□□□ 0.45
PDLIM2-218ENST00000614502 STAC3Q96MF2 364 aa17.84■□□□□ 0.45
PDLIM2-218ENST00000614502 SRCAPQ6ZRS2 3230 aa17.82■□□□□ 0.44
PDLIM2-218ENST00000614502 ATAD2Q6PL18 1390 aa17.82■□□□□ 0.44
PDLIM2-218ENST00000614502 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.81■□□□□ 0.44
PDLIM2-218ENST00000614502 CFAP70Q5T0N1 1121 aa17.8■□□□□ 0.44
PDLIM2-218ENST00000614502 DLC1Q96QB1 1528 aa17.8■□□□□ 0.44
PDLIM2-218ENST00000614502 GLI3P10071 1580 aa17.78■□□□□ 0.44
PDLIM2-218ENST00000614502 BRWD3Q6RI45 1802 aa17.77■□□□□ 0.44
PDLIM2-218ENST00000614502 USP32Q8NFA0 1604 aa17.77■□□□□ 0.44
PDLIM2-218ENST00000614502 SPATA31A3Q5VYP0 1347 aa17.76■□□□□ 0.43
PDLIM2-218ENST00000614502 POGKQ9P215 609 aa17.76■□□□□ 0.43
PDLIM2-218ENST00000614502 ABCA3Q99758 1704 aa17.75■□□□□ 0.43
PDLIM2-218ENST00000614502 GJD4Q96KN9 370 aaPredicted RBP17.75■□□□□ 0.43
PDLIM2-218ENST00000614502 SLIT2O94813 1529 aa17.75■□□□□ 0.43
PDLIM2-218ENST00000614502 PSME1Q06323 249 aa17.74■□□□□ 0.43
PDLIM2-218ENST00000614502 KRT28Q7Z3Y7 464 aa17.74■□□□□ 0.43
PDLIM2-218ENST00000614502 DCAF11Q8TEB1 546 aa17.74■□□□□ 0.43
PDLIM2-218ENST00000614502 PRAM1Q96QH2 718 aa17.74■□□□□ 0.43
PDLIM2-218ENST00000614502 RALGAPBQ86X10 1494 aa17.74■□□□□ 0.43
PDLIM2-218ENST00000614502 PLCH1Q4KWH8 1693 aa17.74■□□□□ 0.43
PDLIM2-218ENST00000614502 PLEKHG5O94827 1062 aa17.73■□□□□ 0.43
PDLIM2-218ENST00000614502 SAFB2Q14151 953 aaKnown RBP eCLIP17.73■□□□□ 0.43
PDLIM2-218ENST00000614502 PHF8Q9UPP1 1060 aa17.73■□□□□ 0.43
PDLIM2-218ENST00000614502 EIF3AQ14152 1382 aaKnown RBP17.73■□□□□ 0.43
PDLIM2-218ENST00000614502 ADGRB1O14514 1584 aa17.73■□□□□ 0.43
PDLIM2-218ENST00000614502 ADGRB2O60241 1585 aa17.73■□□□□ 0.43
PDLIM2-218ENST00000614502 UNC5CLQ8IV45 518 aa17.72■□□□□ 0.43
PDLIM2-218ENST00000614502 CABLES1Q8TDN4 633 aa17.72■□□□□ 0.43
PDLIM2-218ENST00000614502 KDM2AQ9Y2K7 1162 aa17.72■□□□□ 0.43
PDLIM2-218ENST00000614502 TNS3Q68CZ2 1445 aa17.72■□□□□ 0.43
PDLIM2-218ENST00000614502 ANKARQ7Z5J8 1434 aa17.72■□□□□ 0.43
PDLIM2-218ENST00000614502 TRAK1Q9UPV9 953 aa17.69■□□□□ 0.42
PDLIM2-218ENST00000614502 NWD2Q9ULI1 1742 aa17.69■□□□□ 0.42
PDLIM2-218ENST00000614502 SBNO1A3KN83 1393 aa17.68■□□□□ 0.42
PDLIM2-218ENST00000614502 TRPM3Q9HCF6 1732 aaPredicted RBP17.67■□□□□ 0.42
PDLIM2-218ENST00000614502 KIAA1210Q9ULL0 1709 aa17.67■□□□□ 0.42
PDLIM2-218ENST00000614502 ARHGEF10O15013 1369 aa17.66■□□□□ 0.42
PDLIM2-218ENST00000614502 HAP1P54257 671 aaPredicted RBP17.66■□□□□ 0.42
PDLIM2-218ENST00000614502 PMFBP1Q8TBY8 1022 aa17.66■□□□□ 0.42
PDLIM2-218ENST00000614502 ITSN1Q15811 1721 aa17.65■□□□□ 0.42
PDLIM2-218ENST00000614502 ARHGEF28Q8N1W1 1705 aaKnown RBP17.65■□□□□ 0.42
PDLIM2-218ENST00000614502 LMOD2Q6P5Q4 547 aa17.65■□□□□ 0.42
PDLIM2-218ENST00000614502 NRAPQ86VF7 1730 aa17.64■□□□□ 0.41
PDLIM2-218ENST00000614502 TULP4Q9NRJ4 1543 aa17.64■□□□□ 0.41
PDLIM2-218ENST00000614502 ZRANB1Q9UGI0 708 aa17.64■□□□□ 0.41
PDLIM2-218ENST00000614502 ALS2Q96Q42 1657 aa17.64■□□□□ 0.41
PDLIM2-218ENST00000614502 CCDC125Q86Z20 511 aa17.63■□□□□ 0.41
PDLIM2-218ENST00000614502 SEPT12Q8IYM1 358 aa17.63■□□□□ 0.41
PDLIM2-218ENST00000614502 HIRIP3Q9BW71 556 aaPredicted RBP17.63■□□□□ 0.41
PDLIM2-218ENST00000614502 MINK1Q8N4C8 1332 aaPredicted RBP17.63■□□□□ 0.41
PDLIM2-218ENST00000614502 GPRASP1Q5JY77 1395 aa17.63■□□□□ 0.41
PDLIM2-218ENST00000614502 WASLO00401 505 aaPredicted RBP17.62■□□□□ 0.41
PDLIM2-218ENST00000614502 VPS72Q15906 364 aa17.62■□□□□ 0.41
PDLIM2-218ENST00000614502 DEFB132Q7Z7B7 95 aa17.62■□□□□ 0.41
PDLIM2-218ENST00000614502 BLMP54132 1417 aaPredicted RBP17.62■□□□□ 0.41
PDLIM2-218ENST00000614502 FAM83GA6ND36 823 aa17.61■□□□□ 0.41
PDLIM2-218ENST00000614502 PRR36Q9H6K5 1346 aa17.61■□□□□ 0.41
PDLIM2-218ENST00000614502 CRYBG1Q9Y4K1 1723 aa17.61■□□□□ 0.41
PDLIM2-218ENST00000614502 CCDC9Q9Y3X0 531 aaKnown RBP17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms