RNA–Protein interactions for RNA: ENST00000614398.4

CBWD3-210, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,563 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-210ENST00000614398 TMEM132EQ6IEE7 984 aa8.75□□□□□ -1.01
CBWD3-210ENST00000614398 ERICH6Q7L0X2 663 aa8.75□□□□□ -1.01
CBWD3-210ENST00000614398 XIRP1Q702N8 1843 aaKnown RBP8.75□□□□□ -1.01
CBWD3-210ENST00000614398 DCCP43146 1447 aa8.75□□□□□ -1.01
CBWD3-210ENST00000614398 CCDC7Q96M83 1385 aa8.75□□□□□ -1.01
CBWD3-210ENST00000614398 NINLQ9Y2I6 1382 aa8.75□□□□□ -1.01
CBWD3-210ENST00000614398 ADGRL3Q9HAR2 1447 aa8.75□□□□□ -1.01
CBWD3-210ENST00000614398 HSPA2P54652 639 aa8.74□□□□□ -1.01
CBWD3-210ENST00000614398 CDCA8Q53HL2 280 aa8.74□□□□□ -1.01
CBWD3-210ENST00000614398 SLC26A8Q96RN1 970 aa8.74□□□□□ -1.01
CBWD3-210ENST00000614398 AMOTL2Q9Y2J4 779 aa8.74□□□□□ -1.01
CBWD3-210ENST00000614398 ANKARQ7Z5J8 1434 aa8.73□□□□□ -1.01
CBWD3-210ENST00000614398 LTBP4Q8N2S1 1624 aa8.73□□□□□ -1.01
CBWD3-210ENST00000614398 TMF1P82094 1093 aa8.73□□□□□ -1.01
CBWD3-210ENST00000614398 TRAK1Q9UPV9 953 aa8.73□□□□□ -1.01
CBWD3-210ENST00000614398 DISP3Q9P2K9 1392 aa8.73□□□□□ -1.01
CBWD3-210ENST00000614398 USP32Q8NFA0 1604 aa8.73□□□□□ -1.01
CBWD3-210ENST00000614398 PRKCSHP14314 528 aaPredicted RBP8.72□□□□□ -1.01
CBWD3-210ENST00000614398 PIAS4Q8N2W9 510 aaPredicted RBP8.72□□□□□ -1.01
CBWD3-210ENST00000614398 BCANQ96GW7 911 aa8.72□□□□□ -1.01
CBWD3-210ENST00000614398 PRAM1Q96QH2 718 aa8.72□□□□□ -1.01
CBWD3-210ENST00000614398 PLEKHH1Q9ULM0 1364 aa8.72□□□□□ -1.01
CBWD3-210ENST00000614398 IQSEC2Q5JU85 1478 aa8.72□□□□□ -1.01
CBWD3-210ENST00000614398 LRRC7Q96NW7 1537 aa8.72□□□□□ -1.01
CBWD3-210ENST00000614398 ADRA2BP18089 450 aa8.71□□□□□ -1.01
CBWD3-210ENST00000614398 KIF7Q2M1P5 1343 aa8.71□□□□□ -1.01
CBWD3-210ENST00000614398 EVC2Q86UK5 1308 aa8.71□□□□□ -1.01
CBWD3-210ENST00000614398 ATAD2Q6PL18 1390 aa8.71□□□□□ -1.01
CBWD3-210ENST00000614398 AKAP12Q02952 1782 aa8.71□□□□□ -1.02
CBWD3-210ENST00000614398 WASHC2AQ641Q2 1341 aa8.71□□□□□ -1.02
CBWD3-210ENST00000614398 ATP7BP35670 1465 aa8.71□□□□□ -1.02
CBWD3-210ENST00000614398 KIF1AQ12756 1690 aa8.7□□□□□ -1.02
CBWD3-210ENST00000614398 POGKQ9P215 609 aa8.7□□□□□ -1.02
CBWD3-210ENST00000614398 MON2Q7Z3U7 1717 aa8.7□□□□□ -1.02
CBWD3-210ENST00000614398 STK26Q9P289 416 aa8.69□□□□□ -1.02
CBWD3-210ENST00000614398 C11orf95C9JLR9 678 aaPredicted RBP8.69□□□□□ -1.02
CBWD3-210ENST00000614398 USP54Q70EL1 1684 aa8.68□□□□□ -1.02
CBWD3-210ENST00000614398 WASLO00401 505 aaPredicted RBP8.68□□□□□ -1.02
CBWD3-210ENST00000614398 NRKQ7Z2Y5 1582 aa8.68□□□□□ -1.02
CBWD3-210ENST00000614398 WAPLQ7Z5K2 1190 aa8.67□□□□□ -1.02
CBWD3-210ENST00000614398 BRD4O60885 1362 aaPredicted RBP8.67□□□□□ -1.02
CBWD3-210ENST00000614398 TMEM94Q12767 1356 aa8.66□□□□□ -1.02
CBWD3-210ENST00000614398 NPC1L1Q9UHC9 1359 aa8.66□□□□□ -1.02
CBWD3-210ENST00000614398 CD163L1Q9NR16 1453 aa8.66□□□□□ -1.02
CBWD3-210ENST00000614398 ANKRD26Q9UPS8 1709 aa8.66□□□□□ -1.02
CBWD3-210ENST00000614398 MSH5O43196 834 aa8.66□□□□□ -1.02
CBWD3-210ENST00000614398 CPSF1Q10570 1443 aaKnown RBP8.66□□□□□ -1.02
CBWD3-210ENST00000614398 BCL11AQ9H165 835 aa8.66□□□□□ -1.02
CBWD3-210ENST00000614398 ANKRD36BQ8N2N9 1353 aa8.65□□□□□ -1.02
CBWD3-210ENST00000614398 MINK1Q8N4C8 1332 aaPredicted RBP8.65□□□□□ -1.02
CBWD3-210ENST00000614398 CDK19Q9BWU1 502 aa8.65□□□□□ -1.02
CBWD3-210ENST00000614398 POLR3AO14802 1390 aaPredicted RBP8.65□□□□□ -1.02
CBWD3-210ENST00000614398 MST1RQ04912 1400 aa8.65□□□□□ -1.03
CBWD3-210ENST00000614398 RGPD8O14715 1765 aaPredicted RBP8.65□□□□□ -1.03
CBWD3-210ENST00000614398 PROSER2Q86WR7 435 aaPredicted RBP8.65□□□□□ -1.03
CBWD3-210ENST00000614398 C19orf44Q9H6X5 657 aa8.65□□□□□ -1.03
CBWD3-210ENST00000614398 ZNF335Q9H4Z2 1342 aaPredicted RBP8.64□□□□□ -1.03
CBWD3-210ENST00000614398 MSH6P52701 1360 aa8.64□□□□□ -1.03
CBWD3-210ENST00000614398 PLEKHG3A1L390 1219 aa8.64□□□□□ -1.03
CBWD3-210ENST00000614398 HIRIP3Q9BW71 556 aaPredicted RBP8.64□□□□□ -1.03
CBWD3-210ENST00000614398 KIF20BQ96Q89 1820 aa8.64□□□□□ -1.03
CBWD3-210ENST00000614398 KTN1Q86UP2 1357 aaKnown RBP8.64□□□□□ -1.03
CBWD3-210ENST00000614398 PRR36Q9H6K5 1346 aa8.63□□□□□ -1.03
CBWD3-210ENST00000614398 C1orf167Q5SNV9 1468 aa8.63□□□□□ -1.03
CBWD3-210ENST00000614398 PPIP5K1Q6PFW1 1433 aa8.63□□□□□ -1.03
CBWD3-210ENST00000614398 NSD2O96028 1365 aa8.63□□□□□ -1.03
CBWD3-210ENST00000614398 CCDC61Q9Y6R9 512 aa8.63□□□□□ -1.03
CBWD3-210ENST00000614398 NHSL1Q5SYE7 1610 aa8.62□□□□□ -1.03
CBWD3-210ENST00000614398 TRPM3Q9HCF6 1732 aaPredicted RBP8.62□□□□□ -1.03
CBWD3-210ENST00000614398 SSH2Q76I76 1423 aa8.62□□□□□ -1.03
CBWD3-210ENST00000614398 NUDT16Q96DE0 195 aaKnown RBP8.62□□□□□ -1.03
CBWD3-210ENST00000614398 EDC4Q6P2E9 1401 aaKnown RBP8.62□□□□□ -1.03
CBWD3-210ENST00000614398 CADPS2Q86UW7 1296 aa8.62□□□□□ -1.03
CBWD3-210ENST00000614398 SRPK2P78362 688 aaKnown RBP8.61□□□□□ -1.03
CBWD3-210ENST00000614398 PER1O15534 1290 aaPredicted RBP8.61□□□□□ -1.03
CBWD3-210ENST00000614398 SAFB2Q14151 953 aaKnown RBP eCLIP8.61□□□□□ -1.03
CBWD3-210ENST00000614398 CABP2Q9NPB3 220 aa8.61□□□□□ -1.03
CBWD3-210ENST00000614398 TERF2IPQ9NYB0 399 aa8.61□□□□□ -1.03
CBWD3-210ENST00000614398 A0A1W2PP64 1363 aa8.6□□□□□ -1.03
CBWD3-210ENST00000614398 AHDC1Q5TGY3 1603 aaPredicted RBP8.6□□□□□ -1.03
CBWD3-210ENST00000614398 CENPBP07199 599 aaPredicted RBP8.6□□□□□ -1.03
CBWD3-210ENST00000614398 ZNF692Q9BU19 519 aaPredicted RBP8.6□□□□□ -1.03
CBWD3-210ENST00000614398 USP6P35125 1406 aa8.59□□□□□ -1.03
CBWD3-210ENST00000614398 ALS2Q96Q42 1657 aa8.59□□□□□ -1.03
CBWD3-210ENST00000614398 MARF1Q9Y4F3 1742 aaKnown RBP8.59□□□□□ -1.03
CBWD3-210ENST00000614398 MED1Q15648 1581 aaPredicted RBP8.59□□□□□ -1.03
CBWD3-210ENST00000614398 NSD3Q9BZ95 1437 aa8.58□□□□□ -1.04
CBWD3-210ENST00000614398 ATF3P18847 181 aa8.58□□□□□ -1.04
CBWD3-210ENST00000614398 DDX10Q13206 875 aaKnown RBP8.58□□□□□ -1.04
CBWD3-210ENST00000614398 HDGFL2Q7Z4V5 671 aaPredicted RBP8.58□□□□□ -1.04
CBWD3-210ENST00000614398 PARD3Q8TEW0 1356 aa8.58□□□□□ -1.04
CBWD3-210ENST00000614398 PANK3Q9H999 370 aa8.58□□□□□ -1.04
CBWD3-210ENST00000614398 PIK3C2AO00443 1686 aa8.57□□□□□ -1.04
CBWD3-210ENST00000614398 PXDNQ92626 1479 aa8.57□□□□□ -1.04
CBWD3-210ENST00000614398 USP31Q70CQ4 1352 aa8.57□□□□□ -1.04
CBWD3-210ENST00000614398 CGNL1Q0VF96 1302 aa8.57□□□□□ -1.04
CBWD3-210ENST00000614398 TTC21AQ8NDW8 1320 aa8.57□□□□□ -1.04
CBWD3-210ENST00000614398 SLC12A5Q9H2X9 1139 aa8.57□□□□□ -1.04
CBWD3-210ENST00000614398 CRYBG1Q9Y4K1 1723 aa8.57□□□□□ -1.04
CBWD3-210ENST00000614398 SBNO1A3KN83 1393 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms