RNA–Protein interactions for RNA: ENST00000614256.4

CHTOP-207, Transcript of chromatin target of PRMT1, humanhuman

TSL 3 BASIC

Gene CHTOP, Length 1,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-207ENST00000614256 PTCH1Q13635 1447 aa26.06■■□□□ 1.76
CHTOP-207ENST00000614256 KCNA6P17658 529 aa26.06■■□□□ 1.76
CHTOP-207ENST00000614256 MINK1Q8N4C8 1332 aaPredicted RBP26.06■■□□□ 1.76
CHTOP-207ENST00000614256 STRCP1A6NGW2 1772 aa26.06■■□□□ 1.76
CHTOP-207ENST00000614256 NWD1Q149M9 1564 aa26.05■■□□□ 1.76
CHTOP-207ENST00000614256 MYOM1P52179 1685 aa26.03■■□□□ 1.76
CHTOP-207ENST00000614256 DIEXFQ68CQ4 756 aaKnown RBP26.02■■□□□ 1.76
CHTOP-207ENST00000614256 SLC24A1O60721 1099 aa25.98■■□□□ 1.75
CHTOP-207ENST00000614256 ADGRB2O60241 1585 aa25.97■■□□□ 1.75
CHTOP-207ENST00000614256 EVC2Q86UK5 1308 aa25.97■■□□□ 1.75
CHTOP-207ENST00000614256 NALCNQ8IZF0 1738 aa25.95■■□□□ 1.75
CHTOP-207ENST00000614256 CDCA8Q53HL2 280 aa25.95■■□□□ 1.74
CHTOP-207ENST00000614256 RBM33Q96EV2 1170 aaKnown RBP25.93■■□□□ 1.74
CHTOP-207ENST00000614256 CABP2Q9NPB3 220 aa25.93■■□□□ 1.74
CHTOP-207ENST00000614256 NKTRP30414 1462 aaKnown RBP25.91■■□□□ 1.74
CHTOP-207ENST00000614256 CDK19Q9BWU1 502 aa25.91■■□□□ 1.74
CHTOP-207ENST00000614256 AEBP2Q6ZN18 517 aaPredicted RBP25.91■■□□□ 1.74
CHTOP-207ENST00000614256 WASLO00401 505 aaPredicted RBP25.88■■□□□ 1.73
CHTOP-207ENST00000614256 SRPK2P78362 688 aaKnown RBP25.88■■□□□ 1.73
CHTOP-207ENST00000614256 XIRP1Q702N8 1843 aaKnown RBP25.86■■□□□ 1.73
CHTOP-207ENST00000614256 PUS7Q96PZ0 661 aaKnown RBP25.86■■□□□ 1.73
CHTOP-207ENST00000614256 ZNF335Q9H4Z2 1342 aaPredicted RBP25.86■■□□□ 1.73
CHTOP-207ENST00000614256 RGPD8O14715 1765 aaPredicted RBP25.85■■□□□ 1.73
CHTOP-207ENST00000614256 PROSER2Q86WR7 435 aaPredicted RBP25.84■■□□□ 1.73
CHTOP-207ENST00000614256 USP32Q8NFA0 1604 aa25.84■■□□□ 1.73
CHTOP-207ENST00000614256 FMN2Q9NZ56 1722 aa25.84■■□□□ 1.73
CHTOP-207ENST00000614256 DMRT2Q9Y5R5 561 aa25.84■■□□□ 1.73
CHTOP-207ENST00000614256 ADGRL3Q9HAR2 1447 aa25.84■■□□□ 1.73
CHTOP-207ENST00000614256 CDC42BPGQ6DT37 1551 aa25.82■■□□□ 1.72
CHTOP-207ENST00000614256 PANK3Q9H999 370 aa25.82■■□□□ 1.72
CHTOP-207ENST00000614256 ATP7BP35670 1465 aa25.82■■□□□ 1.72
CHTOP-207ENST00000614256 ATAD2Q6PL18 1390 aa25.82■■□□□ 1.72
CHTOP-207ENST00000614256 SLC12A5Q9H2X9 1139 aa25.81■■□□□ 1.72
CHTOP-207ENST00000614256 TOPAZ1Q8N9V7 1692 aa25.81■■□□□ 1.72
CHTOP-207ENST00000614256 PRR36Q9H6K5 1346 aa25.81■■□□□ 1.72
CHTOP-207ENST00000614256 TMC1Q8TDI8 760 aa25.8■■□□□ 1.72
CHTOP-207ENST00000614256 TMEM94Q12767 1356 aa25.79■■□□□ 1.72
CHTOP-207ENST00000614256 NUTM2FA1L443 756 aa25.78■■□□□ 1.72
CHTOP-207ENST00000614256 NUDT16Q96DE0 195 aaKnown RBP25.77■■□□□ 1.72
CHTOP-207ENST00000614256 LRRC7Q96NW7 1537 aa25.76■■□□□ 1.72
CHTOP-207ENST00000614256 PER1O15534 1290 aaPredicted RBP25.76■■□□□ 1.71
CHTOP-207ENST00000614256 CD163L1Q9NR16 1453 aa25.76■■□□□ 1.71
CHTOP-207ENST00000614256 ITSN1Q15811 1721 aa25.75■■□□□ 1.71
CHTOP-207ENST00000614256 C14orf37Q86TY3 774 aa25.75■■□□□ 1.71
CHTOP-207ENST00000614256 PPIP5K1Q6PFW1 1433 aa25.74■■□□□ 1.71
CHTOP-207ENST00000614256 MIER1Q8N108 512 aa25.74■■□□□ 1.71
CHTOP-207ENST00000614256 CABP1Q9NZU7 370 aa25.74■■□□□ 1.71
CHTOP-207ENST00000614256 NINLQ9Y2I6 1382 aa25.73■■□□□ 1.71
CHTOP-207ENST00000614256 CARD14Q9BXL6 1004 aa25.72■■□□□ 1.71
CHTOP-207ENST00000614256 NCOA3Q9Y6Q9 1424 aa25.71■■□□□ 1.71
CHTOP-207ENST00000614256 CCDC61Q9Y6R9 512 aa25.71■■□□□ 1.71
CHTOP-207ENST00000614256 AKAP12Q02952 1782 aa25.71■■□□□ 1.71
CHTOP-207ENST00000614256 A0A1W2PP64 1363 aa25.71■■□□□ 1.71
CHTOP-207ENST00000614256 ANKRD36BQ8N2N9 1353 aa25.71■■□□□ 1.71
CHTOP-207ENST00000614256 ANKARQ7Z5J8 1434 aa25.7■■□□□ 1.7
CHTOP-207ENST00000614256 C19orf44Q9H6X5 657 aa25.68■■□□□ 1.7
CHTOP-207ENST00000614256 LTBP4Q8N2S1 1624 aa25.68■■□□□ 1.7
CHTOP-207ENST00000614256 CNGB1Q14028 1251 aaPredicted RBP25.67■■□□□ 1.7
CHTOP-207ENST00000614256 MON2Q7Z3U7 1717 aa25.66■■□□□ 1.7
CHTOP-207ENST00000614256 NSD3Q9BZ95 1437 aa25.66■■□□□ 1.7
CHTOP-207ENST00000614256 CPSF1Q10570 1443 aaKnown RBP25.65■■□□□ 1.7
CHTOP-207ENST00000614256 ANP32CO43423 234 aa25.64■■□□□ 1.7
CHTOP-207ENST00000614256 DCCP43146 1447 aa25.63■■□□□ 1.69
CHTOP-207ENST00000614256 TERF2IPQ9NYB0 399 aa25.63■■□□□ 1.69
CHTOP-207ENST00000614256 KNSTRNQ9Y448 316 aa25.63■■□□□ 1.69
CHTOP-207ENST00000614256 PLEKHG3A1L390 1219 aa25.63■■□□□ 1.69
CHTOP-207ENST00000614256 AMER1Q5JTC6 1135 aaPredicted RBP25.62■■□□□ 1.69
CHTOP-207ENST00000614256 MSH6P52701 1360 aa25.61■■□□□ 1.69
CHTOP-207ENST00000614256 PRKRIP1Q9H875 184 aaPredicted RBP25.61■■□□□ 1.69
CHTOP-207ENST00000614256 HDGFL2Q7Z4V5 671 aaPredicted RBP25.6■■□□□ 1.69
CHTOP-207ENST00000614256 PMFBP1Q8TBY8 1022 aa25.6■■□□□ 1.69
CHTOP-207ENST00000614256 MST1RQ04912 1400 aa25.6■■□□□ 1.69
CHTOP-207ENST00000614256 ACEP12821 1306 aa25.6■■□□□ 1.69
CHTOP-207ENST00000614256 NRKQ7Z2Y5 1582 aa25.59■■□□□ 1.69
CHTOP-207ENST00000614256 CC2D1BQ5T0F9 858 aaKnown RBP25.59■■□□□ 1.69
CHTOP-207ENST00000614256 C1orf167Q5SNV9 1468 aa25.59■■□□□ 1.69
CHTOP-207ENST00000614256 KTN1Q86UP2 1357 aaKnown RBP25.58■■□□□ 1.69
CHTOP-207ENST00000614256 KIF20BQ96Q89 1820 aa25.58■■□□□ 1.69
CHTOP-207ENST00000614256 ATF3P18847 181 aa25.58■■□□□ 1.68
CHTOP-207ENST00000614256 POLR3AO14802 1390 aaPredicted RBP25.57■■□□□ 1.68
CHTOP-207ENST00000614256 ORAI2Q96SN7 254 aa25.56■■□□□ 1.68
CHTOP-207ENST00000614256 NPC1L1Q9UHC9 1359 aa25.55■■□□□ 1.68
CHTOP-207ENST00000614256 ESCO1Q5FWF5 840 aa25.54■■□□□ 1.68
CHTOP-207ENST00000614256 CADPS2Q86UW7 1296 aa25.54■■□□□ 1.68
CHTOP-207ENST00000614256 PHF8Q9UPP1 1060 aa25.54■■□□□ 1.68
CHTOP-207ENST00000614256 PARD3Q8TEW0 1356 aa25.54■■□□□ 1.68
CHTOP-207ENST00000614256 EDC4Q6P2E9 1401 aaKnown RBP25.53■■□□□ 1.68
CHTOP-207ENST00000614256 ANKRD26Q9UPS8 1709 aa25.53■■□□□ 1.68
CHTOP-207ENST00000614256 USP6P35125 1406 aa25.53■■□□□ 1.68
CHTOP-207ENST00000614256 NGDNQ8NEJ9 315 aaKnown RBP25.52■■□□□ 1.68
CHTOP-207ENST00000614256 KIF1AQ12756 1690 aa25.52■■□□□ 1.68
CHTOP-207ENST00000614256 CGNL1Q0VF96 1302 aa25.52■■□□□ 1.68
CHTOP-207ENST00000614256 ZNF692Q9BU19 519 aaPredicted RBP25.51■■□□□ 1.67
CHTOP-207ENST00000614256 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.5■■□□□ 1.67
CHTOP-207ENST00000614256 SSH2Q76I76 1423 aa25.49■■□□□ 1.67
CHTOP-207ENST00000614256 FYB1O15117 783 aa25.48■■□□□ 1.67
CHTOP-207ENST00000614256 RALBP1Q15311 655 aa25.47■■□□□ 1.67
CHTOP-207ENST00000614256 GGNBP2Q9H3C7 697 aa25.46■■□□□ 1.67
CHTOP-207ENST00000614256 NSD2O96028 1365 aa25.45■■□□□ 1.67
CHTOP-207ENST00000614256 TTC21BQ7Z4L5 1316 aa25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms