RNA–Protein interactions for RNA: ENST00000613928.1

CCL3-205, Transcript of C-C motif chemokine ligand 3, humanhuman

TSL 5

Gene CCL3, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3-205ENST00000613928 DAXXQ9UER7 740 aaPredicted RBP12.55□□□□□ -0.4
CCL3-205ENST00000613928 ZCCHC11Q5TAX3 1644 aaKnown RBP12.55□□□□□ -0.4
CCL3-205ENST00000613928 MYOM3Q5VTT5 1437 aa12.54□□□□□ -0.4
CCL3-205ENST00000613928 UHRF1BP1LA0JNW5 1464 aa12.54□□□□□ -0.4
CCL3-205ENST00000613928 OATP04181 439 aa12.54□□□□□ -0.4
CCL3-205ENST00000613928 COL9A1P20849 921 aa12.54□□□□□ -0.4
CCL3-205ENST00000613928 KDM4CQ9H3R0 1056 aa12.54□□□□□ -0.4
CCL3-205ENST00000613928 ITGAEP38570 1179 aa12.53□□□□□ -0.4
CCL3-205ENST00000613928 FAM50AQ14320 339 aaKnown RBP12.53□□□□□ -0.4
CCL3-205ENST00000613928 VARS2Q5ST30 1063 aaKnown RBP12.53□□□□□ -0.4
CCL3-205ENST00000613928 UACAQ9BZF9 1416 aa12.53□□□□□ -0.4
CCL3-205ENST00000613928 TEX14Q8IWB6 1497 aa12.53□□□□□ -0.4
CCL3-205ENST00000613928 TTLL12Q14166 644 aaPredicted RBP12.52□□□□□ -0.41
CCL3-205ENST00000613928 KCNK17Q96T54 332 aa12.52□□□□□ -0.41
CCL3-205ENST00000613928 ADGRG1Q9Y653 693 aa12.52□□□□□ -0.41
CCL3-205ENST00000613928 PARP9Q8IXQ6 854 aa12.51□□□□□ -0.41
CCL3-205ENST00000613928 METTL3Q86U44 580 aaKnown RBP12.5□□□□□ -0.41
CCL3-205ENST00000613928 ATP10BO94823 1461 aa12.5□□□□□ -0.41
CCL3-205ENST00000613928 KDM5BQ9UGL1 1544 aa12.5□□□□□ -0.41
CCL3-205ENST00000613928 TROQ12816 1431 aaPredicted RBP12.49□□□□□ -0.41
CCL3-205ENST00000613928 FAM163AQ96GL9 167 aaPredicted RBP12.49□□□□□ -0.41
CCL3-205ENST00000613928 CDK11AQ9UQ88 783 aaPredicted RBP12.49□□□□□ -0.41
CCL3-205ENST00000613928 PTPN23Q9H3S7 1636 aa12.48□□□□□ -0.41
CCL3-205ENST00000613928 TCOF1Q13428 1488 aaKnown RBP12.48□□□□□ -0.41
CCL3-205ENST00000613928 RBM46Q8TBY0 533 aaKnown RBP12.48□□□□□ -0.41
CCL3-205ENST00000613928 MARVELD3Q96A59 401 aa12.48□□□□□ -0.41
CCL3-205ENST00000613928 TRIM6-TRIM34B2RNG4 842 aa12.47□□□□□ -0.41
CCL3-205ENST00000613928 CLCN1P35523 988 aa12.47□□□□□ -0.41
CCL3-205ENST00000613928 PBX2P40425 430 aa12.47□□□□□ -0.41
CCL3-205ENST00000613928 FAM161AQ3B820 660 aa12.47□□□□□ -0.41
CCL3-205ENST00000613928 PXYLP1Q8TE99 480 aa12.47□□□□□ -0.41
CCL3-205ENST00000613928 PTPRKQ15262 1439 aa12.46□□□□□ -0.41
CCL3-205ENST00000613928 MIA2Q96PC5 1412 aa12.46□□□□□ -0.41
CCL3-205ENST00000613928 NBPF26B4DH59 902 aa12.46□□□□□ -0.41
CCL3-205ENST00000613928 ARHGAP33O14559 1287 aa12.46□□□□□ -0.41
CCL3-205ENST00000613928 ONECUT3O60422 494 aaPredicted RBP12.46□□□□□ -0.41
CCL3-205ENST00000613928 TSKSQ9UJT2 592 aa12.46□□□□□ -0.41
CCL3-205ENST00000613928 DHX57Q6P158 1386 aaKnown RBP12.45□□□□□ -0.42
CCL3-205ENST00000613928 PACS2Q86VP3 889 aa12.45□□□□□ -0.42
CCL3-205ENST00000613928 GPCPD1Q9NPB8 672 aa12.45□□□□□ -0.42
CCL3-205ENST00000613928 WDR7Q9Y4E6 1490 aa12.45□□□□□ -0.42
CCL3-205ENST00000613928 SETD5Q9C0A6 1442 aa12.45□□□□□ -0.42
CCL3-205ENST00000613928 RAB3GAP2Q9H2M9 1393 aa12.44□□□□□ -0.42
CCL3-205ENST00000613928 FAM205CA6NFA0 338 aa12.44□□□□□ -0.42
CCL3-205ENST00000613928 GIGYF2Q6Y7W6 1299 aaKnown RBP12.44□□□□□ -0.42
CCL3-205ENST00000613928 PHOX2BQ99453 314 aa12.44□□□□□ -0.42
CCL3-205ENST00000613928 FAM198AQ9UFP1 575 aa12.44□□□□□ -0.42
CCL3-205ENST00000613928 KIF14Q15058 1648 aa12.44□□□□□ -0.42
CCL3-205ENST00000613928 MDM2Q00987 491 aaPredicted RBP12.43□□□□□ -0.42
CCL3-205ENST00000613928 ZNF687Q8N1G0 1237 aa12.43□□□□□ -0.42
CCL3-205ENST00000613928 DDRGK1Q96HY6 314 aa12.43□□□□□ -0.42
CCL3-205ENST00000613928 ZBED2Q9BTP6 218 aa12.43□□□□□ -0.42
CCL3-205ENST00000613928 PLEKHD1A6NEE1 506 aa12.42□□□□□ -0.42
CCL3-205ENST00000613928 PSEN2P49810 448 aa12.42□□□□□ -0.42
CCL3-205ENST00000613928 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.41□□□□□ -0.42
CCL3-205ENST00000613928 PROX2Q3B8N5 592 aa12.41□□□□□ -0.42
CCL3-205ENST00000613928 TMUB1Q9BVT8 246 aa12.41□□□□□ -0.42
CCL3-205ENST00000613928 SLC4A5Q9BY07 1137 aa12.41□□□□□ -0.42
CCL3-205ENST00000613928 GPATCH8Q9UKJ3 1502 aaKnown RBP12.41□□□□□ -0.42
CCL3-205ENST00000613928 NUDT18Q6ZVK8 323 aa12.4□□□□□ -0.42
CCL3-205ENST00000613928 IL27Q8NEV9 243 aa12.4□□□□□ -0.42
CCL3-205ENST00000613928 FBXO41Q8TF61 875 aa12.4□□□□□ -0.42
CCL3-205ENST00000613928 EYA1Q99502 592 aa12.4□□□□□ -0.42
CCL3-205ENST00000613928 PNMA3Q9UL41 463 aa12.4□□□□□ -0.42
CCL3-205ENST00000613928 CD109Q6YHK3 1445 aa12.39□□□□□ -0.43
CCL3-205ENST00000613928 POTEEQ6S8J3 1075 aa12.39□□□□□ -0.43
CCL3-205ENST00000613928 TATDN2Q93075 761 aa12.39□□□□□ -0.43
CCL3-205ENST00000613928 HS3ST6Q96QI5 342 aa12.39□□□□□ -0.43
CCL3-205ENST00000613928 REPIN1Q9BWE0 567 aaKnown RBP12.39□□□□□ -0.43
CCL3-205ENST00000613928 FAM117AQ9C073 453 aa12.39□□□□□ -0.43
CCL3-205ENST00000613928 ITSN2Q9NZM3 1697 aa12.38□□□□□ -0.43
CCL3-205ENST00000613928 ZNF644Q9H582 1327 aaPredicted RBP12.37□□□□□ -0.43
CCL3-205ENST00000613928 HFM1A2PYH4 1435 aa12.37□□□□□ -0.43
CCL3-205ENST00000613928 AXIN2Q9Y2T1 843 aa12.37□□□□□ -0.43
CCL3-205ENST00000613928 CLSPNQ9HAW4 1339 aa12.37□□□□□ -0.43
CCL3-205ENST00000613928 RCCD1A6NED2 376 aa12.36□□□□□ -0.43
CCL3-205ENST00000613928 DNAJB2P25686 324 aa12.36□□□□□ -0.43
CCL3-205ENST00000613928 NLRP7Q8WX94 980 aa12.36□□□□□ -0.43
CCL3-205ENST00000613928 KIAA1468Q9P260 1216 aa12.36□□□□□ -0.43
CCL3-205ENST00000613928 RABGEF1Q9UJ41 708 aa12.36□□□□□ -0.43
CCL3-205ENST00000613928 NAIPQ13075 1403 aa12.36□□□□□ -0.43
CCL3-205ENST00000613928 MS4A1P11836 297 aa12.35□□□□□ -0.43
CCL3-205ENST00000613928 LCE2DQ5TA82 110 aaPredicted RBP12.35□□□□□ -0.43
CCL3-205ENST00000613928 DMRTA1Q5VZB9 504 aa12.35□□□□□ -0.43
CCL3-205ENST00000613928 FAM217BQ9NTX9 383 aaPredicted RBP12.35□□□□□ -0.43
CCL3-205ENST00000613928 CFDP1Q9UEE9 299 aaPredicted RBP12.35□□□□□ -0.43
CCL3-205ENST00000613928 ABCC5O15440 1437 aa12.35□□□□□ -0.43
CCL3-205ENST00000613928 DAPK1P53355 1430 aa12.35□□□□□ -0.43
CCL3-205ENST00000613928 CAMSAP2Q08AD1 1489 aa12.34□□□□□ -0.43
CCL3-205ENST00000613928 CDC42BPAQ5VT25 1732 aa12.34□□□□□ -0.43
CCL3-205ENST00000613928 DNMT1P26358 1616 aaKnown RBP12.34□□□□□ -0.43
CCL3-205ENST00000613928 SSTR3P32745 418 aaPredicted RBP12.34□□□□□ -0.43
CCL3-205ENST00000613928 ADAMTSL3P82987 1691 aa12.33□□□□□ -0.44
CCL3-205ENST00000613928 C3orf80F5H4A9 247 aa12.33□□□□□ -0.44
CCL3-205ENST00000613928 CHIC2Q9UKJ5 165 aa12.33□□□□□ -0.44
CCL3-205ENST00000613928 AKNAQ7Z591 1439 aa12.33□□□□□ -0.44
CCL3-205ENST00000613928 PTPRMP28827 1452 aa12.33□□□□□ -0.44
CCL3-205ENST00000613928 PLEKHG3A1L390 1219 aa12.32□□□□□ -0.44
CCL3-205ENST00000613928 GTF3C3Q9Y5Q9 886 aa12.32□□□□□ -0.44
CCL3-205ENST00000613928 GCC2Q8IWJ2 1684 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms