RNA–Protein interactions for RNA: ENST00000613667.1

LINC00649-216, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 827 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-216ENST00000613667 FUT2Q10981 343 aa6.94□□□□□ -1.3
LINC00649-216ENST00000613667 SLC27A5Q9Y2P5 690 aa6.94□□□□□ -1.3
LINC00649-216ENST00000613667 MSS51Q4VC12 460 aa6.93□□□□□ -1.3
LINC00649-216ENST00000613667 ERBB4Q15303 1308 aa6.93□□□□□ -1.3
LINC00649-216ENST00000613667 VEGFBP49765 207 aa6.92□□□□□ -1.3
LINC00649-216ENST00000613667 RNF19BQ6ZMZ0 732 aa6.92□□□□□ -1.3
LINC00649-216ENST00000613667 SPRYD3Q8NCJ5 442 aa6.92□□□□□ -1.3
LINC00649-216ENST00000613667 ATP6V1AP38606 617 aa6.91□□□□□ -1.3
LINC00649-216ENST00000613667 BRICD5Q6PL45 260 aa6.91□□□□□ -1.3
LINC00649-216ENST00000613667 NUTM2FA1L443 756 aa6.9□□□□□ -1.3
LINC00649-216ENST00000613667 OATP04181 439 aa6.9□□□□□ -1.3
LINC00649-216ENST00000613667 GSK3AP49840 483 aa6.9□□□□□ -1.3
LINC00649-216ENST00000613667 METTL3Q86U44 580 aaKnown RBP6.89□□□□□ -1.31
LINC00649-216ENST00000613667 TMEM151AQ8N4L1 468 aa6.89□□□□□ -1.31
LINC00649-216ENST00000613667 BMP1P13497 986 aa6.88□□□□□ -1.31
LINC00649-216ENST00000613667 FECHP22830 423 aa6.88□□□□□ -1.31
LINC00649-216ENST00000613667 TRIM46Q7Z4K8 759 aa6.88□□□□□ -1.31
LINC00649-216ENST00000613667 RDH13Q8NBN7 331 aa6.88□□□□□ -1.31
LINC00649-216ENST00000613667 SKOR1P84550 965 aa6.87□□□□□ -1.31
LINC00649-216ENST00000613667 NLRP7Q8WX94 980 aa6.87□□□□□ -1.31
LINC00649-216ENST00000613667 FCHSD2O94868 740 aa6.86□□□□□ -1.31
LINC00649-216ENST00000613667 VSIG8P0DPA2 414 aa6.86□□□□□ -1.31
LINC00649-216ENST00000613667 WNT7BP56706 349 aa6.86□□□□□ -1.31
LINC00649-216ENST00000613667 RC3H1Q5TC82 1133 aaKnown RBP6.86□□□□□ -1.31
LINC00649-216ENST00000613667 DDX11L8A8MPP1 907 aa6.85□□□□□ -1.31
LINC00649-216ENST00000613667 CAPN5O15484 640 aaPredicted RBP6.85□□□□□ -1.31
LINC00649-216ENST00000613667 GDF11O95390 407 aa6.85□□□□□ -1.31
LINC00649-216ENST00000613667 GCGRP47871 477 aa6.85□□□□□ -1.31
LINC00649-216ENST00000613667 MMP16P51512 607 aa6.85□□□□□ -1.31
LINC00649-216ENST00000613667 RNF225M0QZC1 329 aaPredicted RBP6.84□□□□□ -1.31
LINC00649-216ENST00000613667 ALDH1A1P00352 501 aa6.84□□□□□ -1.31
LINC00649-216ENST00000613667 RASSF7Q02833 373 aa6.84□□□□□ -1.31
LINC00649-216ENST00000613667 DAXXQ9UER7 740 aaPredicted RBP6.84□□□□□ -1.31
LINC00649-216ENST00000613667 KCNV2Q8TDN2 545 aa6.83□□□□□ -1.32
LINC00649-216ENST00000613667 ARHGEF1Q92888 912 aaKnown RBP6.83□□□□□ -1.32
LINC00649-216ENST00000613667 GRIPAP1Q4V328 841 aa6.82□□□□□ -1.32
LINC00649-216ENST00000613667 Q3C1V9 767 aa6.81□□□□□ -1.32
LINC00649-216ENST00000613667 CFAP44Q96MT7 982 aa6.81□□□□□ -1.32
LINC00649-216ENST00000613667 DXOO77932 396 aaKnown RBP6.8□□□□□ -1.32
LINC00649-216ENST00000613667 IGHA1P01876 353 aa6.8□□□□□ -1.32
LINC00649-216ENST00000613667 PAXIP1Q6ZW49 1069 aaPredicted RBP6.8□□□□□ -1.32
LINC00649-216ENST00000613667 ZFP42Q96MM3 310 aa6.8□□□□□ -1.32
LINC00649-216ENST00000613667 WASF2Q9Y6W5 498 aa6.8□□□□□ -1.32
LINC00649-216ENST00000613667 PHOX2BQ99453 314 aa6.79□□□□□ -1.32
LINC00649-216ENST00000613667 KRTAP4-8Q9BYQ9 185 aa6.79□□□□□ -1.32
LINC00649-216ENST00000613667 SIAH2O43255 324 aa6.78□□□□□ -1.32
LINC00649-216ENST00000613667 XP32Q5T750 250 aa6.78□□□□□ -1.32
LINC00649-216ENST00000613667 SULF1Q8IWU6 871 aa6.78□□□□□ -1.32
LINC00649-216ENST00000613667 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.78□□□□□ -1.32
LINC00649-216ENST00000613667 HIC1Q14526 733 aa6.77□□□□□ -1.33
LINC00649-216ENST00000613667 CCDC24Q8N4L8 307 aa6.77□□□□□ -1.33
LINC00649-216ENST00000613667 USB1Q9BQ65 265 aaKnown RBP6.76□□□□□ -1.33
LINC00649-216ENST00000613667 SOBPA7XYQ1 873 aa6.75□□□□□ -1.33
LINC00649-216ENST00000613667 SEMA3EO15041 775 aa6.75□□□□□ -1.33
LINC00649-216ENST00000613667 SCARF1Q14162 830 aa6.75□□□□□ -1.33
LINC00649-216ENST00000613667 HLA-CQ95604 372 aa6.75□□□□□ -1.33
LINC00649-216ENST00000613667 DNMT3AQ9Y6K1 912 aaPredicted RBP6.75□□□□□ -1.33
LINC00649-216ENST00000613667 GPR37O15354 613 aa6.74□□□□□ -1.33
LINC00649-216ENST00000613667 FOXK2Q01167 660 aa6.74□□□□□ -1.33
LINC00649-216ENST00000613667 EHBP1Q8NDI1 1231 aa6.74□□□□□ -1.33
LINC00649-216ENST00000613667 ADAMTS8Q9UP79 889 aa6.74□□□□□ -1.33
LINC00649-216ENST00000613667 GPAT2Q6NUI2 795 aa6.73□□□□□ -1.33
LINC00649-216ENST00000613667 MRPL14Q6P1L8 145 aaKnown RBP6.73□□□□□ -1.33
LINC00649-216ENST00000613667 RBM26Q5T8P6 1007 aaKnown RBP6.72□□□□□ -1.33
LINC00649-216ENST00000613667 PTCRAQ6ISU1 281 aaPredicted RBP6.72□□□□□ -1.33
LINC00649-216ENST00000613667 GNPATO15228 680 aa6.71□□□□□ -1.34
LINC00649-216ENST00000613667 PURBQ96QR8 312 aaKnown RBP6.7□□□□□ -1.34
LINC00649-216ENST00000613667 PPFIA3O75145 1194 aa6.69□□□□□ -1.34
LINC00649-216ENST00000613667 CD46P15529 392 aa6.69□□□□□ -1.34
LINC00649-216ENST00000613667 SH3BP2P78314 561 aa6.68□□□□□ -1.34
LINC00649-216ENST00000613667 KANK3Q6NY19 840 aa6.68□□□□□ -1.34
LINC00649-216ENST00000613667 TLL2Q9Y6L7 1015 aa6.68□□□□□ -1.34
LINC00649-216ENST00000613667 PLEKHG3A1L390 1219 aa6.67□□□□□ -1.34
LINC00649-216ENST00000613667 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.67□□□□□ -1.34
LINC00649-216ENST00000613667 GUCA2AQ02747 115 aa6.67□□□□□ -1.34
LINC00649-216ENST00000613667 SYMPKQ92797 1274 aaKnown RBP6.67□□□□□ -1.34
LINC00649-216ENST00000613667 MAN1A2O60476 641 aa6.66□□□□□ -1.34
LINC00649-216ENST00000613667 KDM4AO75164 1064 aa6.66□□□□□ -1.34
LINC00649-216ENST00000613667 JUNDP17535 347 aa6.66□□□□□ -1.34
LINC00649-216ENST00000613667 MPNDQ8N594 471 aa6.66□□□□□ -1.34
LINC00649-216ENST00000613667 ADH1CP00326 375 aa6.65□□□□□ -1.34
LINC00649-216ENST00000613667 IRS1P35568 1242 aa6.65□□□□□ -1.34
LINC00649-216ENST00000613667 KRT76Q01546 638 aa6.65□□□□□ -1.34
LINC00649-216ENST00000613667 NNTQ13423 1086 aa6.65□□□□□ -1.34
LINC00649-216ENST00000613667 NUDT12Q9BQG2 462 aa6.65□□□□□ -1.34
LINC00649-216ENST00000613667 KRTAP9-2Q9BYQ4 174 aa6.65□□□□□ -1.34
LINC00649-216ENST00000613667 TSHZ2Q9NRE2 1034 aa6.65□□□□□ -1.34
LINC00649-216ENST00000613667 TIMP2P16035 220 aa6.64□□□□□ -1.35
LINC00649-216ENST00000613667 CNTNAP3BQ96NU0 1288 aa6.64□□□□□ -1.35
LINC00649-216ENST00000613667 CNTNAP3Q9BZ76 1288 aa6.64□□□□□ -1.35
LINC00649-216ENST00000613667 HOXA2O43364 376 aa6.63□□□□□ -1.35
LINC00649-216ENST00000613667 ADAM23O75077 832 aa6.63□□□□□ -1.35
LINC00649-216ENST00000613667 WDR4P57081 412 aaKnown RBP6.63□□□□□ -1.35
LINC00649-216ENST00000613667 ZNF385CQ66K41 422 aaPredicted RBP6.63□□□□□ -1.35
LINC00649-216ENST00000613667 PSMG3-AS1Q96PY0 264 aa6.63□□□□□ -1.35
LINC00649-216ENST00000613667 USP46P62068 366 aa6.62□□□□□ -1.35
LINC00649-216ENST00000613667 SVOPQ8N4V2 548 aa6.62□□□□□ -1.35
LINC00649-216ENST00000613667 KLF16Q9BXK1 252 aaPredicted RBP6.62□□□□□ -1.35
LINC00649-216ENST00000613667 KRTAP9-6A0A140TA67 174 aa6.61□□□□□ -1.35
LINC00649-216ENST00000613667 TESPA1A2RU30 521 aaPredicted RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms