RNA–Protein interactions for RNA: ENST00000613455.4

CPNE9-205, Transcript of copine family member 9, humanhuman

TSL 5 BASIC

Gene CPNE9, Length 1,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-205ENST00000613455 WAPLQ7Z5K2 1190 aa28.08■■■□□ 2.09
CPNE9-205ENST00000613455 PTCH1Q13635 1447 aa28.07■■■□□ 2.08
CPNE9-205ENST00000613455 AMOTL2Q9Y2J4 779 aa28.05■■■□□ 2.08
CPNE9-205ENST00000613455 MINK1Q8N4C8 1332 aaPredicted RBP28.04■■■□□ 2.08
CPNE9-205ENST00000613455 EVC2Q86UK5 1308 aa28.02■■■□□ 2.08
CPNE9-205ENST00000613455 STRCQ7RTU9 1775 aa28.02■■■□□ 2.08
CPNE9-205ENST00000613455 SIPA1L2Q9P2F8 1722 aaPredicted RBP28■■■□□ 2.07
CPNE9-205ENST00000613455 MIER1Q8N108 512 aa28■■■□□ 2.07
CPNE9-205ENST00000613455 ADGRB2O60241 1585 aa27.98■■■□□ 2.07
CPNE9-205ENST00000613455 NWD1Q149M9 1564 aa27.98■■■□□ 2.07
CPNE9-205ENST00000613455 KCNA6P17658 529 aa27.97■■■□□ 2.07
CPNE9-205ENST00000613455 PUS7Q96PZ0 661 aaKnown RBP27.97■■■□□ 2.07
CPNE9-205ENST00000613455 CABP2Q9NPB3 220 aa27.93■■■□□ 2.06
CPNE9-205ENST00000613455 CDK19Q9BWU1 502 aa27.9■■■□□ 2.06
CPNE9-205ENST00000613455 PANK3Q9H999 370 aa27.9■■■□□ 2.06
CPNE9-205ENST00000613455 SRPK2P78362 688 aaKnown RBP27.89■■■□□ 2.06
CPNE9-205ENST00000613455 ATAD2Q6PL18 1390 aa27.88■■■□□ 2.05
CPNE9-205ENST00000613455 WASLO00401 505 aaPredicted RBP27.88■■■□□ 2.05
CPNE9-205ENST00000613455 PER1O15534 1290 aaPredicted RBP27.87■■■□□ 2.05
CPNE9-205ENST00000613455 ANP32CO43423 234 aa27.87■■■□□ 2.05
CPNE9-205ENST00000613455 STRCP1A6NGW2 1772 aa27.86■■■□□ 2.05
CPNE9-205ENST00000613455 NALCNQ8IZF0 1738 aa27.85■■■□□ 2.05
CPNE9-205ENST00000613455 NKTRP30414 1462 aaKnown RBP27.84■■■□□ 2.05
CPNE9-205ENST00000613455 SLC12A5Q9H2X9 1139 aa27.84■■■□□ 2.05
CPNE9-205ENST00000613455 NINLQ9Y2I6 1382 aa27.83■■■□□ 2.05
CPNE9-205ENST00000613455 TMC1Q8TDI8 760 aa27.82■■■□□ 2.04
CPNE9-205ENST00000613455 ATP7BP35670 1465 aa27.81■■■□□ 2.04
CPNE9-205ENST00000613455 PRKRIP1Q9H875 184 aaPredicted RBP27.79■■■□□ 2.04
CPNE9-205ENST00000613455 TOPAZ1Q8N9V7 1692 aa27.79■■■□□ 2.04
CPNE9-205ENST00000613455 USP32Q8NFA0 1604 aa27.78■■■□□ 2.04
CPNE9-205ENST00000613455 ANKRD36BQ8N2N9 1353 aa27.78■■■□□ 2.04
CPNE9-205ENST00000613455 CDC42BPGQ6DT37 1551 aa27.78■■■□□ 2.04
CPNE9-205ENST00000613455 CD163L1Q9NR16 1453 aa27.77■■■□□ 2.04
CPNE9-205ENST00000613455 ADGRL3Q9HAR2 1447 aa27.77■■■□□ 2.04
CPNE9-205ENST00000613455 PRR36Q9H6K5 1346 aa27.77■■■□□ 2.04
CPNE9-205ENST00000613455 CARD14Q9BXL6 1004 aa27.76■■■□□ 2.03
CPNE9-205ENST00000613455 FMN2Q9NZ56 1722 aa27.76■■■□□ 2.03
CPNE9-205ENST00000613455 NUDT16Q96DE0 195 aaKnown RBP27.75■■■□□ 2.03
CPNE9-205ENST00000613455 RBM33Q96EV2 1170 aaKnown RBP27.75■■■□□ 2.03
CPNE9-205ENST00000613455 A0A1W2PP64 1363 aa27.74■■■□□ 2.03
CPNE9-205ENST00000613455 PPIP5K1Q6PFW1 1433 aa27.73■■■□□ 2.03
CPNE9-205ENST00000613455 CABP1Q9NZU7 370 aa27.72■■■□□ 2.03
CPNE9-205ENST00000613455 KNSTRNQ9Y448 316 aa27.72■■■□□ 2.03
CPNE9-205ENST00000613455 AMER1Q5JTC6 1135 aaPredicted RBP27.72■■■□□ 2.03
CPNE9-205ENST00000613455 NSD3Q9BZ95 1437 aa27.72■■■□□ 2.03
CPNE9-205ENST00000613455 PROSER2Q86WR7 435 aaPredicted RBP27.7■■■□□ 2.03
CPNE9-205ENST00000613455 CCDC61Q9Y6R9 512 aa27.7■■■□□ 2.03
CPNE9-205ENST00000613455 RGPD8O14715 1765 aaPredicted RBP27.7■■■□□ 2.02
CPNE9-205ENST00000613455 ITSN1Q15811 1721 aa27.7■■■□□ 2.02
CPNE9-205ENST00000613455 KTN1Q86UP2 1357 aaKnown RBP27.7■■■□□ 2.02
CPNE9-205ENST00000613455 CNGB1Q14028 1251 aaPredicted RBP27.7■■■□□ 2.02
CPNE9-205ENST00000613455 NPC1L1Q9UHC9 1359 aa27.69■■■□□ 2.02
CPNE9-205ENST00000613455 PARD3Q8TEW0 1356 aa27.68■■■□□ 2.02
CPNE9-205ENST00000613455 ANKARQ7Z5J8 1434 aa27.68■■■□□ 2.02
CPNE9-205ENST00000613455 AKAP12Q02952 1782 aa27.67■■■□□ 2.02
CPNE9-205ENST00000613455 NUTM2FA1L443 756 aa27.67■■■□□ 2.02
CPNE9-205ENST00000613455 CCER2I3L3R5 266 aa27.67■■■□□ 2.02
CPNE9-205ENST00000613455 TERF2IPQ9NYB0 399 aa27.67■■■□□ 2.02
CPNE9-205ENST00000613455 CPSF1Q10570 1443 aaKnown RBP27.66■■■□□ 2.02
CPNE9-205ENST00000613455 CC2D1BQ5T0F9 858 aaKnown RBP27.66■■■□□ 2.02
CPNE9-205ENST00000613455 TMEM94Q12767 1356 aa27.65■■■□□ 2.02
CPNE9-205ENST00000613455 XIRP1Q702N8 1843 aaKnown RBP27.65■■■□□ 2.02
CPNE9-205ENST00000613455 DMRT2Q9Y5R5 561 aa27.65■■■□□ 2.02
CPNE9-205ENST00000613455 ZNF335Q9H4Z2 1342 aaPredicted RBP27.65■■■□□ 2.02
CPNE9-205ENST00000613455 MON2Q7Z3U7 1717 aa27.64■■■□□ 2.02
CPNE9-205ENST00000613455 NCOA3Q9Y6Q9 1424 aa27.64■■■□□ 2.02
CPNE9-205ENST00000613455 RALBP1Q15311 655 aa27.63■■■□□ 2.01
CPNE9-205ENST00000613455 HDGFL2Q7Z4V5 671 aaPredicted RBP27.63■■■□□ 2.01
CPNE9-205ENST00000613455 C14orf37Q86TY3 774 aa27.61■■■□□ 2.01
CPNE9-205ENST00000613455 PLEKHG3A1L390 1219 aa27.6■■■□□ 2.01
CPNE9-205ENST00000613455 LRRC7Q96NW7 1537 aa27.6■■■□□ 2.01
CPNE9-205ENST00000613455 CGNL1Q0VF96 1302 aa27.58■■■□□ 2.01
CPNE9-205ENST00000613455 NRKQ7Z2Y5 1582 aa27.57■■■□□ 2
CPNE9-205ENST00000613455 C19orf44Q9H6X5 657 aa27.57■■■□□ 2
CPNE9-205ENST00000613455 MYBBP1AQ9BQG0 1328 aaKnown RBP27.57■■■□□ 2
CPNE9-205ENST00000613455 KIF20BQ96Q89 1820 aa27.56■■■□□ 2
CPNE9-205ENST00000613455 DCCP43146 1447 aa27.56■■■□□ 2
CPNE9-205ENST00000613455 EDC4Q6P2E9 1401 aaKnown RBP27.56■■■□□ 2
CPNE9-205ENST00000613455 CCDC184Q52MB2 194 aa27.55■■■□□ 2
CPNE9-205ENST00000613455 ACEP12821 1306 aa27.55■■■□□ 2
CPNE9-205ENST00000613455 POLR3AO14802 1390 aaPredicted RBP27.55■■■□□ 2
CPNE9-205ENST00000613455 NSD2O96028 1365 aa27.55■■■□□ 2
CPNE9-205ENST00000613455 ANKRD26Q9UPS8 1709 aa27.54■■■□□ 2
CPNE9-205ENST00000613455 USP6P35125 1406 aa27.51■■□□□ 1.99
CPNE9-205ENST00000613455 PMFBP1Q8TBY8 1022 aa27.51■■□□□ 1.99
CPNE9-205ENST00000613455 ZNF692Q9BU19 519 aaPredicted RBP27.51■■□□□ 1.99
CPNE9-205ENST00000613455 MST1RQ04912 1400 aa27.48■■□□□ 1.99
CPNE9-205ENST00000613455 MSH6P52701 1360 aa27.48■■□□□ 1.99
CPNE9-205ENST00000613455 FYB1O15117 783 aa27.48■■□□□ 1.99
CPNE9-205ENST00000613455 C1orf167Q5SNV9 1468 aa27.48■■□□□ 1.99
CPNE9-205ENST00000613455 SSH2Q76I76 1423 aa27.48■■□□□ 1.99
CPNE9-205ENST00000613455 NLRP13Q86W25 1043 aa27.47■■□□□ 1.99
CPNE9-205ENST00000613455 MRS2Q9HD23 443 aa27.47■■□□□ 1.99
CPNE9-205ENST00000613455 BRD4O60885 1362 aaPredicted RBP27.46■■□□□ 1.99
CPNE9-205ENST00000613455 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.46■■□□□ 1.99
CPNE9-205ENST00000613455 PHF8Q9UPP1 1060 aa27.46■■□□□ 1.99
CPNE9-205ENST00000613455 ATF3P18847 181 aa27.45■■□□□ 1.99
CPNE9-205ENST00000613455 PPP2R1AP30153 589 aa27.45■■□□□ 1.99
CPNE9-205ENST00000613455 NGDNQ8NEJ9 315 aaKnown RBP27.45■■□□□ 1.99
CPNE9-205ENST00000613455 GGNBP2Q9H3C7 697 aa27.44■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms