RNA–Protein interactions for RNA: ENST00000613138.1

CSTF1-208, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 4

Gene CSTF1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-208ENST00000613138 RGPD8O14715 1765 aaPredicted RBP18.42■□□□□ 0.54
CSTF1-208ENST00000613138 C1orf167Q5SNV9 1468 aa18.42■□□□□ 0.54
CSTF1-208ENST00000613138 L3MBTL2Q969R5 705 aa18.41■□□□□ 0.54
CSTF1-208ENST00000613138 ORAI2Q96SN7 254 aa18.41■□□□□ 0.54
CSTF1-208ENST00000613138 TRAK1Q9UPV9 953 aa18.41■□□□□ 0.54
CSTF1-208ENST00000613138 AHDC1Q5TGY3 1603 aaPredicted RBP18.41■□□□□ 0.54
CSTF1-208ENST00000613138 CDC42BPGQ6DT37 1551 aa18.4■□□□□ 0.54
CSTF1-208ENST00000613138 PRAM1Q96QH2 718 aa18.4■□□□□ 0.54
CSTF1-208ENST00000613138 NHSL1Q5SYE7 1610 aa18.4■□□□□ 0.54
CSTF1-208ENST00000613138 ARHGEF28Q8N1W1 1705 aaKnown RBP18.39■□□□□ 0.53
CSTF1-208ENST00000613138 FMN2Q9NZ56 1722 aa18.38■□□□□ 0.53
CSTF1-208ENST00000613138 NBPF1Q3BBV0 1214 aa18.38■□□□□ 0.53
CSTF1-208ENST00000613138 ILDR2Q71H61 639 aa18.37■□□□□ 0.53
CSTF1-208ENST00000613138 PCGF6Q9BYE7 350 aa18.37■□□□□ 0.53
CSTF1-208ENST00000613138 DLC1Q96QB1 1528 aa18.36■□□□□ 0.53
CSTF1-208ENST00000613138 KIAA1210Q9ULL0 1709 aa18.35■□□□□ 0.53
CSTF1-208ENST00000613138 HIRIP3Q9BW71 556 aaPredicted RBP18.35■□□□□ 0.53
CSTF1-208ENST00000613138 MINK1Q8N4C8 1332 aaPredicted RBP18.33■□□□□ 0.53
CSTF1-208ENST00000613138 POGKQ9P215 609 aa18.33■□□□□ 0.52
CSTF1-208ENST00000613138 USP32Q8NFA0 1604 aa18.32■□□□□ 0.52
CSTF1-208ENST00000613138 SIRT1Q96EB6 747 aa18.32■□□□□ 0.52
CSTF1-208ENST00000613138 SHPRHQ149N8 1683 aa18.31■□□□□ 0.52
CSTF1-208ENST00000613138 LRP6O75581 1613 aa18.31■□□□□ 0.52
CSTF1-208ENST00000613138 TRPM1Q7Z4N2 1603 aa18.31■□□□□ 0.52
CSTF1-208ENST00000613138 XPCQ01831 940 aaPredicted RBP18.31■□□□□ 0.52
CSTF1-208ENST00000613138 ESCO1Q5FWF5 840 aa18.31■□□□□ 0.52
CSTF1-208ENST00000613138 JCADQ9P266 1359 aa18.3■□□□□ 0.52
CSTF1-208ENST00000613138 NBPF8Q3BBV2 869 aa18.3■□□□□ 0.52
CSTF1-208ENST00000613138 STAC3Q96MF2 364 aa18.3■□□□□ 0.52
CSTF1-208ENST00000613138 ADGRB2O60241 1585 aa18.28■□□□□ 0.52
CSTF1-208ENST00000613138 RGS17Q9UGC6 210 aaPredicted RBP18.27■□□□□ 0.52
CSTF1-208ENST00000613138 FOXO3O43524 673 aa18.26■□□□□ 0.51
CSTF1-208ENST00000613138 PRR36Q9H6K5 1346 aa18.25■□□□□ 0.51
CSTF1-208ENST00000613138 NUTM2BA6NNL0 878 aaPredicted RBP18.25■□□□□ 0.51
CSTF1-208ENST00000613138 NUTM2EB1AL46 878 aaPredicted RBP18.25■□□□□ 0.51
CSTF1-208ENST00000613138 NUTM2AQ8IVF1 878 aaPredicted RBP18.25■□□□□ 0.51
CSTF1-208ENST00000613138 PXDNQ92626 1479 aa18.25■□□□□ 0.51
CSTF1-208ENST00000613138 PHF23Q9BUL5 403 aaPredicted RBP18.24■□□□□ 0.51
CSTF1-208ENST00000613138 PNPLA6Q8IY17 1366 aa18.24■□□□□ 0.51
CSTF1-208ENST00000613138 SOS2Q07890 1332 aaPredicted RBP18.23■□□□□ 0.51
CSTF1-208ENST00000613138 QRICH2Q9H0J4 1663 aa18.23■□□□□ 0.51
CSTF1-208ENST00000613138 KIF1AQ12756 1690 aa18.22■□□□□ 0.51
CSTF1-208ENST00000613138 PMFBP1Q8TBY8 1022 aa18.22■□□□□ 0.51
CSTF1-208ENST00000613138 TONSLQ96HA7 1378 aa18.21■□□□□ 0.51
CSTF1-208ENST00000613138 TULP4Q9NRJ4 1543 aa18.2■□□□□ 0.5
CSTF1-208ENST00000613138 WASLO00401 505 aaPredicted RBP18.2■□□□□ 0.5
CSTF1-208ENST00000613138 LRRC59Q96AG4 307 aaKnown RBP18.2■□□□□ 0.5
CSTF1-208ENST00000613138 ROCK2O75116 1388 aaKnown RBP18.19■□□□□ 0.5
CSTF1-208ENST00000613138 PHF8Q9UPP1 1060 aa18.19■□□□□ 0.5
CSTF1-208ENST00000613138 NPHP3Q7Z494 1330 aa18.19■□□□□ 0.5
CSTF1-208ENST00000613138 POTEAQ6S8J7 498 aa18.18■□□□□ 0.5
CSTF1-208ENST00000613138 SPATA31A6Q5VVP1 1343 aa18.18■□□□□ 0.5
CSTF1-208ENST00000613138 PLEKHG5O94827 1062 aa18.17■□□□□ 0.5
CSTF1-208ENST00000613138 CDK19Q9BWU1 502 aa18.17■□□□□ 0.5
CSTF1-208ENST00000613138 ATP7BP35670 1465 aa18.17■□□□□ 0.5
CSTF1-208ENST00000613138 ANKARQ7Z5J8 1434 aa18.16■□□□□ 0.5
CSTF1-208ENST00000613138 MEX3CQ5U5Q3 659 aaKnown RBP18.16■□□□□ 0.5
CSTF1-208ENST00000613138 KRT28Q7Z3Y7 464 aa18.16■□□□□ 0.5
CSTF1-208ENST00000613138 CENPJQ9HC77 1338 aaPredicted RBP18.16■□□□□ 0.5
CSTF1-208ENST00000613138 COL22A1Q8NFW1 1626 aaPredicted RBP18.16■□□□□ 0.5
CSTF1-208ENST00000613138 TOPAZ1Q8N9V7 1692 aa18.15■□□□□ 0.5
CSTF1-208ENST00000613138 ITSN1Q15811 1721 aa18.15■□□□□ 0.5
CSTF1-208ENST00000613138 TRPM3Q9HCF6 1732 aaPredicted RBP18.15■□□□□ 0.5
CSTF1-208ENST00000613138 ADAMTS2O95450 1211 aa18.14■□□□□ 0.49
CSTF1-208ENST00000613138 NUDT16Q96DE0 195 aaKnown RBP18.14■□□□□ 0.49
CSTF1-208ENST00000613138 RALGAPBQ86X10 1494 aa18.13■□□□□ 0.49
CSTF1-208ENST00000613138 CABP2Q9NPB3 220 aa18.12■□□□□ 0.49
CSTF1-208ENST00000613138 GPRASP1Q5JY77 1395 aa18.12■□□□□ 0.49
CSTF1-208ENST00000613138 C8orf37Q96NL8 207 aa18.11■□□□□ 0.49
CSTF1-208ENST00000613138 SPATA31A3Q5VYP0 1347 aa18.11■□□□□ 0.49
CSTF1-208ENST00000613138 ABCA3Q99758 1704 aa18.1■□□□□ 0.49
CSTF1-208ENST00000613138 MARF1Q9Y4F3 1742 aaKnown RBP18.1■□□□□ 0.49
CSTF1-208ENST00000613138 PSME1Q06323 249 aa18.1■□□□□ 0.49
CSTF1-208ENST00000613138 CABLES1Q8TDN4 633 aa18.1■□□□□ 0.49
CSTF1-208ENST00000613138 TNS3Q68CZ2 1445 aa18.09■□□□□ 0.49
CSTF1-208ENST00000613138 CARD11Q9BXL7 1154 aa18.09■□□□□ 0.49
CSTF1-208ENST00000613138 ALS2Q96Q42 1657 aa18.09■□□□□ 0.49
CSTF1-208ENST00000613138 AFF2P51816 1311 aa18.08■□□□□ 0.49
CSTF1-208ENST00000613138 SRPK2P78362 688 aaKnown RBP18.08■□□□□ 0.48
CSTF1-208ENST00000613138 LMOD2Q6P5Q4 547 aa18.08■□□□□ 0.48
CSTF1-208ENST00000613138 EIF3AQ14152 1382 aaKnown RBP18.07■□□□□ 0.48
CSTF1-208ENST00000613138 NGDNQ8NEJ9 315 aaKnown RBP18.07■□□□□ 0.48
CSTF1-208ENST00000613138 CCER1Q8TC90 406 aaPredicted RBP18.05■□□□□ 0.48
CSTF1-208ENST00000613138 SBNO1A3KN83 1393 aa18.04■□□□□ 0.48
CSTF1-208ENST00000613138 ACEP12821 1306 aa18.04■□□□□ 0.48
CSTF1-208ENST00000613138 CRYBG1Q9Y4K1 1723 aa18.04■□□□□ 0.48
CSTF1-208ENST00000613138 PPIP5K1Q6PFW1 1433 aa18.04■□□□□ 0.48
CSTF1-208ENST00000613138 PAK3O75914 559 aaPredicted RBP18.03■□□□□ 0.48
CSTF1-208ENST00000613138 CCDC61Q9Y6R9 512 aa18.03■□□□□ 0.48
CSTF1-208ENST00000613138 NUTM2GQ5VZR2 741 aa18.02■□□□□ 0.48
CSTF1-208ENST00000613138 NGLY1Q96IV0 654 aa18.02■□□□□ 0.48
CSTF1-208ENST00000613138 SOCS7O14512 581 aa18.01■□□□□ 0.47
CSTF1-208ENST00000613138 CABP1Q9NZU7 370 aa18.01■□□□□ 0.47
CSTF1-208ENST00000613138 POLR3AO14802 1390 aaPredicted RBP18.01■□□□□ 0.47
CSTF1-208ENST00000613138 PLEKHG3A1L390 1219 aa18■□□□□ 0.47
CSTF1-208ENST00000613138 EVC2Q86UK5 1308 aa17.99■□□□□ 0.47
CSTF1-208ENST00000613138 ST20-MTHFSA0A0A6YYL1 179 aa17.98■□□□□ 0.47
CSTF1-208ENST00000613138 ZNF772Q68DY9 489 aaPredicted RBP17.98■□□□□ 0.47
CSTF1-208ENST00000613138 PLCH1Q4KWH8 1693 aa17.98■□□□□ 0.47
CSTF1-208ENST00000613138 AKAP12Q02952 1782 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms