RNA–Protein interactions for RNA: ENST00000613098.4

PPARGC1A-217, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best) BASIC

Gene PPARGC1A, Length 3,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-217ENST00000613098 ABCA9Q8IUA7 1624 aa9.66□□□□□ -0.86
PPARGC1A-217ENST00000613098 PDE3AQ14432 1141 aa9.66□□□□□ -0.86
PPARGC1A-217ENST00000613098 PCDHB15Q9Y5E8 787 aa9.66□□□□□ -0.86
PPARGC1A-217ENST00000613098 ZC3H13Q5T200 1668 aaKnown RBP9.66□□□□□ -0.86
PPARGC1A-217ENST00000613098 SPATA31D1Q6ZQQ2 1576 aa9.66□□□□□ -0.86
PPARGC1A-217ENST00000613098 ATP7AQ04656 1500 aa9.66□□□□□ -0.86
PPARGC1A-217ENST00000613098 SBNO2Q9Y2G9 1366 aa9.65□□□□□ -0.86
PPARGC1A-217ENST00000613098 SOCS7O14512 581 aa9.65□□□□□ -0.86
PPARGC1A-217ENST00000613098 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.65□□□□□ -0.86
PPARGC1A-217ENST00000613098 ANTXR1Q9H6X2 564 aa9.65□□□□□ -0.86
PPARGC1A-217ENST00000613098 COG6Q9Y2V7 657 aa9.65□□□□□ -0.86
PPARGC1A-217ENST00000613098 ADGRB1O14514 1584 aa9.65□□□□□ -0.86
PPARGC1A-217ENST00000613098 CLUAP1Q96AJ1 413 aa9.65□□□□□ -0.87
PPARGC1A-217ENST00000613098 RARSP54136 660 aaKnown RBP9.64□□□□□ -0.87
PPARGC1A-217ENST00000613098 EFCAB6Q5THR3 1501 aa9.64□□□□□ -0.87
PPARGC1A-217ENST00000613098 ADGRB3O60242 1522 aa9.63□□□□□ -0.87
PPARGC1A-217ENST00000613098 SETBP1Q9Y6X0 1596 aa9.63□□□□□ -0.87
PPARGC1A-217ENST00000613098 CGNL1Q0VF96 1302 aa9.62□□□□□ -0.87
PPARGC1A-217ENST00000613098 ZNF518AQ6AHZ1 1483 aa9.62□□□□□ -0.87
PPARGC1A-217ENST00000613098 CENPJQ9HC77 1338 aaPredicted RBP9.62□□□□□ -0.87
PPARGC1A-217ENST00000613098 SLC12A5Q9H2X9 1139 aa9.61□□□□□ -0.87
PPARGC1A-217ENST00000613098 RRP7AQ9Y3A4 280 aaKnown RBP9.61□□□□□ -0.87
PPARGC1A-217ENST00000613098 NSD3Q9BZ95 1437 aa9.61□□□□□ -0.87
PPARGC1A-217ENST00000613098 USP32Q8NFA0 1604 aa9.61□□□□□ -0.87
PPARGC1A-217ENST00000613098 KIDINS220Q9ULH0 1771 aa9.61□□□□□ -0.87
PPARGC1A-217ENST00000613098 LMTK2Q8IWU2 1503 aa9.61□□□□□ -0.87
PPARGC1A-217ENST00000613098 KANK1Q14678 1352 aa9.61□□□□□ -0.87
PPARGC1A-217ENST00000613098 KIF3BO15066 747 aa9.61□□□□□ -0.87
PPARGC1A-217ENST00000613098 NGEFQ8N5V2 710 aa9.61□□□□□ -0.87
PPARGC1A-217ENST00000613098 POGKQ9P215 609 aa9.61□□□□□ -0.87
PPARGC1A-217ENST00000613098 KIF1BO60333 1816 aa9.61□□□□□ -0.87
PPARGC1A-217ENST00000613098 CFAP74Q9C0B2 1584 aa9.6□□□□□ -0.87
PPARGC1A-217ENST00000613098 NOS1P29475 1434 aa9.6□□□□□ -0.87
PPARGC1A-217ENST00000613098 TCP11L2Q8N4U5 519 aa9.6□□□□□ -0.87
PPARGC1A-217ENST00000613098 FANCAO15360 1455 aa9.6□□□□□ -0.87
PPARGC1A-217ENST00000613098 NINLQ9Y2I6 1382 aa9.6□□□□□ -0.87
PPARGC1A-217ENST00000613098 PRKCSHP14314 528 aaPredicted RBP9.6□□□□□ -0.87
PPARGC1A-217ENST00000613098 ADGRB2O60241 1585 aa9.6□□□□□ -0.87
PPARGC1A-217ENST00000613098 QRICH2Q9H0J4 1663 aa9.6□□□□□ -0.87
PPARGC1A-217ENST00000613098 REREQ9P2R6 1566 aa9.59□□□□□ -0.87
PPARGC1A-217ENST00000613098 PPLO60437 1756 aa9.59□□□□□ -0.87
PPARGC1A-217ENST00000613098 PREX1Q8TCU6 1659 aa9.59□□□□□ -0.87
PPARGC1A-217ENST00000613098 RUNDC1Q96C34 613 aa9.59□□□□□ -0.87
PPARGC1A-217ENST00000613098 TBC1D32Q96NH3 1257 aa9.59□□□□□ -0.87
PPARGC1A-217ENST00000613098 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.58□□□□□ -0.88
PPARGC1A-217ENST00000613098 FRMPD1Q5SYB0 1578 aa9.58□□□□□ -0.88
PPARGC1A-217ENST00000613098 CCDC27Q2M243 656 aa9.58□□□□□ -0.88
PPARGC1A-217ENST00000613098 BCL2L13Q9BXK5 485 aa9.58□□□□□ -0.88
PPARGC1A-217ENST00000613098 PDZRN3Q9UPQ7 1066 aa9.58□□□□□ -0.88
PPARGC1A-217ENST00000613098 MAPK8IP3Q9UPT6 1336 aa9.58□□□□□ -0.88
PPARGC1A-217ENST00000613098 ZMYM3Q14202 1370 aa9.58□□□□□ -0.88
PPARGC1A-217ENST00000613098 TULP4Q9NRJ4 1543 aa9.58□□□□□ -0.88
PPARGC1A-217ENST00000613098 CD109Q6YHK3 1445 aa9.58□□□□□ -0.88
PPARGC1A-217ENST00000613098 NEUROD2Q15784 382 aa9.58□□□□□ -0.88
PPARGC1A-217ENST00000613098 C14orf93Q9H972 538 aaKnown RBP9.58□□□□□ -0.88
PPARGC1A-217ENST00000613098 NPATQ14207 1427 aa9.57□□□□□ -0.88
PPARGC1A-217ENST00000613098 TNNT2P45379 298 aaPredicted RBP9.57□□□□□ -0.88
PPARGC1A-217ENST00000613098 WDR63Q8IWG1 891 aa9.57□□□□□ -0.88
PPARGC1A-217ENST00000613098 TBC1D2Q9BYX2 928 aa9.57□□□□□ -0.88
PPARGC1A-217ENST00000613098 MTHFSP49914 203 aa9.57□□□□□ -0.88
PPARGC1A-217ENST00000613098 LMTK3Q96Q04 1460 aa9.57□□□□□ -0.88
PPARGC1A-217ENST00000613098 TMEM132EQ6IEE7 984 aa9.56□□□□□ -0.88
PPARGC1A-217ENST00000613098 PLEKHF1Q96S99 279 aa9.56□□□□□ -0.88
PPARGC1A-217ENST00000613098 TRAK1Q9UPV9 953 aa9.56□□□□□ -0.88
PPARGC1A-217ENST00000613098 SIGLEC1Q9BZZ2 1709 aa9.56□□□□□ -0.88
PPARGC1A-217ENST00000613098 COL3A1P02461 1466 aaPredicted RBP9.56□□□□□ -0.88
PPARGC1A-217ENST00000613098 MORC1Q86VD1 984 aa9.55□□□□□ -0.88
PPARGC1A-217ENST00000613098 FER1L4A9Z1Z3 1794 aa9.54□□□□□ -0.88
PPARGC1A-217ENST00000613098 ARHGEF28Q8N1W1 1705 aaKnown RBP9.54□□□□□ -0.88
PPARGC1A-217ENST00000613098 SLKQ9H2G2 1235 aaPredicted RBP9.54□□□□□ -0.88
PPARGC1A-217ENST00000613098 NCBP3Q53F19 620 aaKnown RBP9.54□□□□□ -0.88
PPARGC1A-217ENST00000613098 DAXXQ9UER7 740 aaPredicted RBP9.54□□□□□ -0.88
PPARGC1A-217ENST00000613098 SLC24A1O60721 1099 aa9.54□□□□□ -0.88
PPARGC1A-217ENST00000613098 ZNF692Q9BU19 519 aaPredicted RBP9.54□□□□□ -0.88
PPARGC1A-217ENST00000613098 TRIM35Q9UPQ4 493 aa9.54□□□□□ -0.88
PPARGC1A-217ENST00000613098 ARHGEF40Q8TER5 1519 aa9.53□□□□□ -0.88
PPARGC1A-217ENST00000613098 MVPQ14764 893 aaKnown RBP9.53□□□□□ -0.88
PPARGC1A-217ENST00000613098 PMFBP1Q8TBY8 1022 aa9.53□□□□□ -0.88
PPARGC1A-217ENST00000613098 AAMPQ13685 434 aa9.52□□□□□ -0.88
PPARGC1A-217ENST00000613098 RRAGDQ9NQL2 400 aaPredicted RBP9.52□□□□□ -0.88
PPARGC1A-217ENST00000613098 TSR2Q969E8 191 aaKnown RBP9.52□□□□□ -0.89
PPARGC1A-217ENST00000613098 PIK3C2BO00750 1634 aa9.52□□□□□ -0.89
PPARGC1A-217ENST00000613098 NEO1Q92859 1461 aa9.52□□□□□ -0.89
PPARGC1A-217ENST00000613098 CD163L1Q9NR16 1453 aa9.52□□□□□ -0.89
PPARGC1A-217ENST00000613098 DDIT3P35638 169 aa9.52□□□□□ -0.89
PPARGC1A-217ENST00000613098 CAMSAP1Q5T5Y3 1602 aa9.51□□□□□ -0.89
PPARGC1A-217ENST00000613098 ANKRD36BQ8N2N9 1353 aa9.51□□□□□ -0.89
PPARGC1A-217ENST00000613098 NEXMIFQ5QGS0 1516 aa9.51□□□□□ -0.89
PPARGC1A-217ENST00000613098 FSD2A1L4K1 749 aa9.51□□□□□ -0.89
PPARGC1A-217ENST00000613098 TRIM27P14373 513 aa9.51□□□□□ -0.89
PPARGC1A-217ENST00000613098 FAM43AQ8N2R8 423 aa9.51□□□□□ -0.89
PPARGC1A-217ENST00000613098 TSPOAP1O95153 1857 aa9.5□□□□□ -0.89
PPARGC1A-217ENST00000613098 CANXP27824 592 aaKnown RBP9.5□□□□□ -0.89
PPARGC1A-217ENST00000613098 NCOA3Q9Y6Q9 1424 aa9.5□□□□□ -0.89
PPARGC1A-217ENST00000613098 ABCC3O15438 1527 aa9.5□□□□□ -0.89
PPARGC1A-217ENST00000613098 SSH1Q8WYL5 1049 aa9.5□□□□□ -0.89
PPARGC1A-217ENST00000613098 ASXL2Q76L83 1435 aa9.49□□□□□ -0.89
PPARGC1A-217ENST00000613098 PTPRMP28827 1452 aa9.49□□□□□ -0.89
PPARGC1A-217ENST00000613098 HDAC1Q13547 482 aaPredicted RBP9.49□□□□□ -0.89
PPARGC1A-217ENST00000613098 PUS7Q96PZ0 661 aaKnown RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms