RNA–Protein interactions for RNA: ENST00000611899.4

PDE1B-209, Transcript of phosphodiesterase 1B, humanhuman

TSL 4

Gene PDE1B, Length 628 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-209ENST00000611899 NPHP3Q7Z494 1330 aa31.49■■■□□ 2.63
PDE1B-209ENST00000611899 TRPC5Q9UL62 973 aaPredicted RBP31.49■■■□□ 2.63
PDE1B-209ENST00000611899 ADGRF5Q8IZF2 1346 aa31.49■■■□□ 2.63
PDE1B-209ENST00000611899 CCDC144AA2RUR9 1427 aa31.48■■■□□ 2.63
PDE1B-209ENST00000611899 RGL3Q3MIN7 710 aa31.47■■■□□ 2.63
PDE1B-209ENST00000611899 STK26Q9P289 416 aa31.47■■■□□ 2.63
PDE1B-209ENST00000611899 FNBP4Q8N3X1 1017 aaPredicted RBP31.46■■■□□ 2.63
PDE1B-209ENST00000611899 CDC42BPGQ6DT37 1551 aa31.46■■■□□ 2.63
PDE1B-209ENST00000611899 FOXO3O43524 673 aa31.43■■■□□ 2.62
PDE1B-209ENST00000611899 XPCQ01831 940 aaPredicted RBP31.42■■■□□ 2.62
PDE1B-209ENST00000611899 WAPLQ7Z5K2 1190 aa31.42■■■□□ 2.62
PDE1B-209ENST00000611899 ATAD2Q6PL18 1390 aa31.42■■■□□ 2.62
PDE1B-209ENST00000611899 ANKRD30BQ9BXX2 1392 aa31.42■■■□□ 2.62
PDE1B-209ENST00000611899 COL22A1Q8NFW1 1626 aaPredicted RBP31.41■■■□□ 2.62
PDE1B-209ENST00000611899 MYOM2P54296 1465 aa31.4■■■□□ 2.62
PDE1B-209ENST00000611899 NUTM2FA1L443 756 aa31.4■■■□□ 2.62
PDE1B-209ENST00000611899 LRPPRCP42704 1394 aaKnown RBP31.4■■■□□ 2.62
PDE1B-209ENST00000611899 TECPR2O15040 1411 aa31.4■■■□□ 2.62
PDE1B-209ENST00000611899 PXDNQ92626 1479 aa31.4■■■□□ 2.62
PDE1B-209ENST00000611899 ATRNO75882 1429 aa31.39■■■□□ 2.62
PDE1B-209ENST00000611899 SPATA31E1Q6ZUB1 1445 aa31.39■■■□□ 2.62
PDE1B-209ENST00000611899 TMEM132EQ6IEE7 984 aa31.37■■■□□ 2.61
PDE1B-209ENST00000611899 MPHOSPH9Q99550 1183 aa31.37■■■□□ 2.61
PDE1B-209ENST00000611899 ABCC11Q96J66 1382 aa31.36■■■□□ 2.61
PDE1B-209ENST00000611899 PLEKHH1Q9ULM0 1364 aa31.33■■■□□ 2.61
PDE1B-209ENST00000611899 PIK3C2GO75747 1445 aa31.32■■■□□ 2.6
PDE1B-209ENST00000611899 BCL9LQ86UU0 1499 aa31.31■■■□□ 2.6
PDE1B-209ENST00000611899 YTHDC2Q9H6S0 1430 aaKnown RBP31.28■■■□□ 2.6
PDE1B-209ENST00000611899 GJD4Q96KN9 370 aaPredicted RBP31.26■■■□□ 2.59
PDE1B-209ENST00000611899 IFT172Q9UG01 1749 aa31.25■■■□□ 2.59
PDE1B-209ENST00000611899 SPATA31A3Q5VYP0 1347 aa31.24■■■□□ 2.59
PDE1B-209ENST00000611899 KNDC1Q76NI1 1749 aa31.24■■■□□ 2.59
PDE1B-209ENST00000611899 KRT28Q7Z3Y7 464 aa31.23■■■□□ 2.59
PDE1B-209ENST00000611899 SIRT1Q96EB6 747 aa31.22■■■□□ 2.59
PDE1B-209ENST00000611899 UNC5CLQ8IV45 518 aa31.2■■■□□ 2.59
PDE1B-209ENST00000611899 C14orf93Q9H972 538 aaKnown RBP31.2■■■□□ 2.59
PDE1B-209ENST00000611899 FMN2Q9NZ56 1722 aa31.2■■■□□ 2.58
PDE1B-209ENST00000611899 KIF1AQ12756 1690 aa31.19■■■□□ 2.58
PDE1B-209ENST00000611899 HAP1P54257 671 aaPredicted RBP31.18■■■□□ 2.58
PDE1B-209ENST00000611899 CCDC125Q86Z20 511 aa31.18■■■□□ 2.58
PDE1B-209ENST00000611899 MARF1Q9Y4F3 1742 aaKnown RBP31.18■■■□□ 2.58
PDE1B-209ENST00000611899 DHX57Q6P158 1386 aaKnown RBP31.17■■■□□ 2.58
PDE1B-209ENST00000611899 ZRANB1Q9UGI0 708 aa31.17■■■□□ 2.58
PDE1B-209ENST00000611899 PHF8Q9UPP1 1060 aa31.17■■■□□ 2.58
PDE1B-209ENST00000611899 ACIN1Q9UKV3 1341 aaKnown RBP31.17■■■□□ 2.58
PDE1B-209ENST00000611899 SLIT2O94813 1529 aa31.16■■■□□ 2.58
PDE1B-209ENST00000611899 PSME1Q06323 249 aa31.16■■■□□ 2.58
PDE1B-209ENST00000611899 CFAP70Q5T0N1 1121 aa31.16■■■□□ 2.58
PDE1B-209ENST00000611899 RALGAPBQ86X10 1494 aa31.14■■■□□ 2.57
PDE1B-209ENST00000611899 SAFB2Q14151 953 aaKnown RBP eCLIP31.13■■■□□ 2.57
PDE1B-209ENST00000611899 PRAM1Q96QH2 718 aa31.13■■■□□ 2.57
PDE1B-209ENST00000611899 TNS3Q68CZ2 1445 aa31.13■■■□□ 2.57
PDE1B-209ENST00000611899 NRXN1Q9ULB1 1477 aa31.12■■■□□ 2.57
PDE1B-209ENST00000611899 PLEKHG5O94827 1062 aa31.11■■■□□ 2.57
PDE1B-209ENST00000611899 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.1■■■□□ 2.57
PDE1B-209ENST00000611899 CABLES1Q8TDN4 633 aa31.1■■■□□ 2.57
PDE1B-209ENST00000611899 USP32Q8NFA0 1604 aa31.09■■■□□ 2.57
PDE1B-209ENST00000611899 LMOD2Q6P5Q4 547 aa31.09■■■□□ 2.57
PDE1B-209ENST00000611899 POGKQ9P215 609 aa31.08■■■□□ 2.57
PDE1B-209ENST00000611899 EP400Q96L91 3159 aa31.08■■■□□ 2.57
PDE1B-209ENST00000611899 GLI3P10071 1580 aa31.08■■■□□ 2.57
PDE1B-209ENST00000611899 SBNO1A3KN83 1393 aa31.07■■■□□ 2.56
PDE1B-209ENST00000611899 SRCAPQ6ZRS2 3230 aa31.06■■■□□ 2.56
PDE1B-209ENST00000611899 ARHGEF10O15013 1369 aa31.05■■■□□ 2.56
PDE1B-209ENST00000611899 VPS72Q15906 364 aa31.04■■■□□ 2.56
PDE1B-209ENST00000611899 SEPT12Q8IYM1 358 aa31.03■■■□□ 2.56
PDE1B-209ENST00000611899 CCDC9Q9Y3X0 531 aaKnown RBP31.03■■■□□ 2.56
PDE1B-209ENST00000611899 BLMP54132 1417 aaPredicted RBP31.03■■■□□ 2.56
PDE1B-209ENST00000611899 PMFBP1Q8TBY8 1022 aa31.02■■■□□ 2.56
PDE1B-209ENST00000611899 ANKARQ7Z5J8 1434 aa31.01■■■□□ 2.55
PDE1B-209ENST00000611899 DLC1Q96QB1 1528 aa31■■■□□ 2.55
PDE1B-209ENST00000611899 SF3B2Q13435 895 aaKnown RBP30.98■■■□□ 2.55
PDE1B-209ENST00000611899 RGPD8O14715 1765 aaPredicted RBP30.97■■■□□ 2.55
PDE1B-209ENST00000611899 TRAK1Q9UPV9 953 aa30.97■■■□□ 2.55
PDE1B-209ENST00000611899 RAB3GAP2Q9H2M9 1393 aa30.96■■■□□ 2.55
PDE1B-209ENST00000611899 HIRIP3Q9BW71 556 aaPredicted RBP30.96■■■□□ 2.55
PDE1B-209ENST00000611899 FAM83GA6ND36 823 aa30.94■■■□□ 2.54
PDE1B-209ENST00000611899 ONECUT3O60422 494 aaPredicted RBP30.93■■■□□ 2.54
PDE1B-209ENST00000611899 DEFB132Q7Z7B7 95 aa30.93■■■□□ 2.54
PDE1B-209ENST00000611899 GPRASP1Q5JY77 1395 aa30.92■■■□□ 2.54
PDE1B-209ENST00000611899 ADGRB1O14514 1584 aa30.92■■■□□ 2.54
PDE1B-209ENST00000611899 ADGRB2O60241 1585 aa30.92■■■□□ 2.54
PDE1B-209ENST00000611899 A0A0G2JS52 829 aa30.92■■■□□ 2.54
PDE1B-209ENST00000611899 MYT1Q01538 1121 aa30.92■■■□□ 2.54
PDE1B-209ENST00000611899 KRT27Q7Z3Y8 459 aa30.92■■■□□ 2.54
PDE1B-209ENST00000611899 PLCH1Q4KWH8 1693 aa30.92■■■□□ 2.54
PDE1B-209ENST00000611899 MINK1Q8N4C8 1332 aaPredicted RBP30.92■■■□□ 2.54
PDE1B-209ENST00000611899 EIF3AQ14152 1382 aaKnown RBP30.92■■■□□ 2.54
PDE1B-209ENST00000611899 KDM2AQ9Y2K7 1162 aa30.91■■■□□ 2.54
PDE1B-209ENST00000611899 NWD2Q9ULI1 1742 aa30.9■■■□□ 2.54
PDE1B-209ENST00000611899 ABCA3Q99758 1704 aa30.89■■■□□ 2.54
PDE1B-209ENST00000611899 DCAF11Q8TEB1 546 aa30.88■■■□□ 2.53
PDE1B-209ENST00000611899 BTG4Q9NY30 223 aa30.87■■■□□ 2.53
PDE1B-209ENST00000611899 PRR36Q9H6K5 1346 aa30.87■■■□□ 2.53
PDE1B-209ENST00000611899 BRWD3Q6RI45 1802 aa30.87■■■□□ 2.53
PDE1B-209ENST00000611899 WASLO00401 505 aaPredicted RBP30.86■■■□□ 2.53
PDE1B-209ENST00000611899 TULP4Q9NRJ4 1543 aa30.84■■■□□ 2.53
PDE1B-209ENST00000611899 FAM98CQ17RN3 349 aaKnown RBP30.84■■■□□ 2.53
PDE1B-209ENST00000611899 NGDNQ8NEJ9 315 aaKnown RBP30.84■■■□□ 2.53
PDE1B-209ENST00000611899 TRPM3Q9HCF6 1732 aaPredicted RBP30.81■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms