RNA–Protein interactions for RNA: ENST00000611897.1

HMGB1P24-201, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 328 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-201ENST00000611897 CDC42BPGQ6DT37 1551 aa19.95■□□□□ 0.78
HMGB1P24-201ENST00000611897 PRAG1Q86YV5 1406 aa19.94■□□□□ 0.78
HMGB1P24-201ENST00000611897 IFT172Q9UG01 1749 aa19.94■□□□□ 0.78
HMGB1P24-201ENST00000611897 XPCQ01831 940 aaPredicted RBP19.94■□□□□ 0.78
HMGB1P24-201ENST00000611897 ESCO1Q5FWF5 840 aa19.94■□□□□ 0.78
HMGB1P24-201ENST00000611897 SOS2Q07890 1332 aaPredicted RBP19.94■□□□□ 0.78
HMGB1P24-201ENST00000611897 RBM6P78332 1123 aaKnown RBP19.93■□□□□ 0.78
HMGB1P24-201ENST00000611897 WAPLQ7Z5K2 1190 aa19.91■□□□□ 0.78
HMGB1P24-201ENST00000611897 TMEM132EQ6IEE7 984 aa19.9■□□□□ 0.78
HMGB1P24-201ENST00000611897 MPHOSPH9Q99550 1183 aa19.9■□□□□ 0.78
HMGB1P24-201ENST00000611897 USP21Q9UK80 565 aa19.9■□□□□ 0.78
HMGB1P24-201ENST00000611897 NPHP3Q7Z494 1330 aa19.9■□□□□ 0.78
HMGB1P24-201ENST00000611897 SPATA31E1Q6ZUB1 1445 aa19.9■□□□□ 0.78
HMGB1P24-201ENST00000611897 ANKRD30BQ9BXX2 1392 aa19.89■□□□□ 0.77
HMGB1P24-201ENST00000611897 KNDC1Q76NI1 1749 aa19.88■□□□□ 0.77
HMGB1P24-201ENST00000611897 COL22A1Q8NFW1 1626 aaPredicted RBP19.88■□□□□ 0.77
HMGB1P24-201ENST00000611897 PLEKHH1Q9ULM0 1364 aa19.88■□□□□ 0.77
HMGB1P24-201ENST00000611897 FOXO3O43524 673 aa19.88■□□□□ 0.77
HMGB1P24-201ENST00000611897 LRPPRCP42704 1394 aaKnown RBP19.87■□□□□ 0.77
HMGB1P24-201ENST00000611897 PXDNQ92626 1479 aa19.86■□□□□ 0.77
HMGB1P24-201ENST00000611897 TECPR2O15040 1411 aa19.85■□□□□ 0.77
HMGB1P24-201ENST00000611897 FMN2Q9NZ56 1722 aa19.85■□□□□ 0.77
HMGB1P24-201ENST00000611897 PIK3C2GO75747 1445 aa19.85■□□□□ 0.77
HMGB1P24-201ENST00000611897 TRPC5Q9UL62 973 aaPredicted RBP19.84■□□□□ 0.77
HMGB1P24-201ENST00000611897 MARF1Q9Y4F3 1742 aaKnown RBP19.84■□□□□ 0.77
HMGB1P24-201ENST00000611897 MYOM2P54296 1465 aa19.84■□□□□ 0.77
HMGB1P24-201ENST00000611897 PLEKHG5O94827 1062 aa19.83■□□□□ 0.77
HMGB1P24-201ENST00000611897 YTHDC2Q9H6S0 1430 aaKnown RBP19.83■□□□□ 0.76
HMGB1P24-201ENST00000611897 ABCC11Q96J66 1382 aa19.82■□□□□ 0.76
HMGB1P24-201ENST00000611897 ATAD2Q6PL18 1390 aa19.81■□□□□ 0.76
HMGB1P24-201ENST00000611897 KIF1AQ12756 1690 aa19.81■□□□□ 0.76
HMGB1P24-201ENST00000611897 RGPD8O14715 1765 aaPredicted RBP19.8■□□□□ 0.76
HMGB1P24-201ENST00000611897 ATRNO75882 1429 aa19.8■□□□□ 0.76
HMGB1P24-201ENST00000611897 SAFB2Q14151 953 aaKnown RBP eCLIP19.8■□□□□ 0.76
HMGB1P24-201ENST00000611897 FNBP4Q8N3X1 1017 aaPredicted RBP19.79■□□□□ 0.76
HMGB1P24-201ENST00000611897 HAP1P54257 671 aaPredicted RBP19.77■□□□□ 0.76
HMGB1P24-201ENST00000611897 CFAP70Q5T0N1 1121 aa19.76■□□□□ 0.75
HMGB1P24-201ENST00000611897 BCL9LQ86UU0 1499 aa19.74■□□□□ 0.75
HMGB1P24-201ENST00000611897 DHX57Q6P158 1386 aaKnown RBP19.74■□□□□ 0.75
HMGB1P24-201ENST00000611897 LMOD2Q6P5Q4 547 aa19.74■□□□□ 0.75
HMGB1P24-201ENST00000611897 KRT28Q7Z3Y7 464 aa19.74■□□□□ 0.75
HMGB1P24-201ENST00000611897 SPATA31A3Q5VYP0 1347 aa19.74■□□□□ 0.75
HMGB1P24-201ENST00000611897 EP400Q96L91 3159 aa19.73■□□□□ 0.75
HMGB1P24-201ENST00000611897 USP32Q8NFA0 1604 aa19.73■□□□□ 0.75
HMGB1P24-201ENST00000611897 PRAM1Q96QH2 718 aa19.73■□□□□ 0.75
HMGB1P24-201ENST00000611897 RAB3GAP2Q9H2M9 1393 aa19.72■□□□□ 0.75
HMGB1P24-201ENST00000611897 C14orf93Q9H972 538 aaKnown RBP19.72■□□□□ 0.75
HMGB1P24-201ENST00000611897 PHF8Q9UPP1 1060 aa19.72■□□□□ 0.75
HMGB1P24-201ENST00000611897 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.71■□□□□ 0.75
HMGB1P24-201ENST00000611897 TNS3Q68CZ2 1445 aa19.71■□□□□ 0.75
HMGB1P24-201ENST00000611897 POGKQ9P215 609 aa19.71■□□□□ 0.75
HMGB1P24-201ENST00000611897 NRXN1Q9ULB1 1477 aa19.71■□□□□ 0.75
HMGB1P24-201ENST00000611897 CABLES1Q8TDN4 633 aa19.7■□□□□ 0.74
HMGB1P24-201ENST00000611897 GJD4Q96KN9 370 aaPredicted RBP19.7■□□□□ 0.74
HMGB1P24-201ENST00000611897 GLI3P10071 1580 aa19.68■□□□□ 0.74
HMGB1P24-201ENST00000611897 PLCH1Q4KWH8 1693 aa19.68■□□□□ 0.74
HMGB1P24-201ENST00000611897 ABCA3Q99758 1704 aa19.68■□□□□ 0.74
HMGB1P24-201ENST00000611897 RALGAPBQ86X10 1494 aa19.67■□□□□ 0.74
HMGB1P24-201ENST00000611897 PSME1Q06323 249 aa19.67■□□□□ 0.74
HMGB1P24-201ENST00000611897 UNC5CLQ8IV45 518 aa19.67■□□□□ 0.74
HMGB1P24-201ENST00000611897 PMFBP1Q8TBY8 1022 aa19.67■□□□□ 0.74
HMGB1P24-201ENST00000611897 HIRIP3Q9BW71 556 aaPredicted RBP19.67■□□□□ 0.74
HMGB1P24-201ENST00000611897 KDM2AQ9Y2K7 1162 aa19.67■□□□□ 0.74
HMGB1P24-201ENST00000611897 CCDC9Q9Y3X0 531 aaKnown RBP19.67■□□□□ 0.74
HMGB1P24-201ENST00000611897 ACIN1Q9UKV3 1341 aaKnown RBP19.67■□□□□ 0.74
HMGB1P24-201ENST00000611897 SLIT2O94813 1529 aa19.66■□□□□ 0.74
HMGB1P24-201ENST00000611897 TRAK1Q9UPV9 953 aa19.66■□□□□ 0.74
HMGB1P24-201ENST00000611897 SIRT1Q96EB6 747 aa19.65■□□□□ 0.74
HMGB1P24-201ENST00000611897 MINK1Q8N4C8 1332 aaPredicted RBP19.65■□□□□ 0.74
HMGB1P24-201ENST00000611897 DLC1Q96QB1 1528 aa19.65■□□□□ 0.74
HMGB1P24-201ENST00000611897 BRWD3Q6RI45 1802 aa19.65■□□□□ 0.74
HMGB1P24-201ENST00000611897 SRCAPQ6ZRS2 3230 aa19.64■□□□□ 0.74
HMGB1P24-201ENST00000611897 ADGRB1O14514 1584 aa19.62■□□□□ 0.73
HMGB1P24-201ENST00000611897 ADGRB2O60241 1585 aa19.62■□□□□ 0.73
HMGB1P24-201ENST00000611897 ARHGEF10O15013 1369 aa19.62■□□□□ 0.73
HMGB1P24-201ENST00000611897 A0A0G2JS52 829 aa19.62■□□□□ 0.73
HMGB1P24-201ENST00000611897 MYT1Q01538 1121 aa19.62■□□□□ 0.73
HMGB1P24-201ENST00000611897 DCAF11Q8TEB1 546 aa19.62■□□□□ 0.73
HMGB1P24-201ENST00000611897 ANKARQ7Z5J8 1434 aa19.61■□□□□ 0.73
HMGB1P24-201ENST00000611897 SBNO1A3KN83 1393 aa19.61■□□□□ 0.73
HMGB1P24-201ENST00000611897 ZRANB1Q9UGI0 708 aa19.61■□□□□ 0.73
HMGB1P24-201ENST00000611897 NWD2Q9ULI1 1742 aa19.6■□□□□ 0.73
HMGB1P24-201ENST00000611897 SEPT12Q8IYM1 358 aa19.58■□□□□ 0.72
HMGB1P24-201ENST00000611897 TRPM3Q9HCF6 1732 aaPredicted RBP19.58■□□□□ 0.72
HMGB1P24-201ENST00000611897 GPRASP1Q5JY77 1395 aa19.57■□□□□ 0.72
HMGB1P24-201ENST00000611897 TULP4Q9NRJ4 1543 aa19.57■□□□□ 0.72
HMGB1P24-201ENST00000611897 EIF3AQ14152 1382 aaKnown RBP19.57■□□□□ 0.72
HMGB1P24-201ENST00000611897 PRR36Q9H6K5 1346 aa19.56■□□□□ 0.72
HMGB1P24-201ENST00000611897 VPS72Q15906 364 aa19.56■□□□□ 0.72
HMGB1P24-201ENST00000611897 CCDC125Q86Z20 511 aa19.56■□□□□ 0.72
HMGB1P24-201ENST00000611897 BLMP54132 1417 aaPredicted RBP19.56■□□□□ 0.72
HMGB1P24-201ENST00000611897 PAK3O75914 559 aaPredicted RBP19.55■□□□□ 0.72
HMGB1P24-201ENST00000611897 SF3B2Q13435 895 aaKnown RBP19.55■□□□□ 0.72
HMGB1P24-201ENST00000611897 ALS2Q96Q42 1657 aa19.55■□□□□ 0.72
HMGB1P24-201ENST00000611897 ARHGEF28Q8N1W1 1705 aaKnown RBP19.54■□□□□ 0.72
HMGB1P24-201ENST00000611897 DEFB132Q7Z7B7 95 aa19.54■□□□□ 0.72
HMGB1P24-201ENST00000611897 NGDNQ8NEJ9 315 aaKnown RBP19.54■□□□□ 0.72
HMGB1P24-201ENST00000611897 NRAPQ86VF7 1730 aa19.54■□□□□ 0.72
HMGB1P24-201ENST00000611897 FAM83GA6ND36 823 aa19.53■□□□□ 0.72
HMGB1P24-201ENST00000611897 ITSN1Q15811 1721 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms