RNA–Protein interactions for RNA: ENST00000611107.1

SNCA-212, Transcript of synuclein alpha, humanhuman

TSL 5 BASIC

Gene SNCA, Length 297 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-212ENST00000611107 LRP6O75581 1613 aa12.73□□□□□ -0.37
SNCA-212ENST00000611107 ABCC11Q96J66 1382 aa12.72□□□□□ -0.37
SNCA-212ENST00000611107 DCAF11Q8TEB1 546 aa12.72□□□□□ -0.37
SNCA-212ENST00000611107 LAMC1P11047 1609 aa12.7□□□□□ -0.38
SNCA-212ENST00000611107 NUTM2FA1L443 756 aa12.7□□□□□ -0.38
SNCA-212ENST00000611107 SIN3AQ96ST3 1273 aa12.7□□□□□ -0.38
SNCA-212ENST00000611107 PCGF6Q9BYE7 350 aa12.7□□□□□ -0.38
SNCA-212ENST00000611107 CDC42BPGQ6DT37 1551 aa12.69□□□□□ -0.38
SNCA-212ENST00000611107 FMN2Q9NZ56 1722 aa12.69□□□□□ -0.38
SNCA-212ENST00000611107 SHPRHQ149N8 1683 aa12.69□□□□□ -0.38
SNCA-212ENST00000611107 SAFB2Q14151 953 aaKnown RBP eCLIP12.68□□□□□ -0.38
SNCA-212ENST00000611107 JCADQ9P266 1359 aa12.67□□□□□ -0.38
SNCA-212ENST00000611107 USP32Q8NFA0 1604 aa12.66□□□□□ -0.38
SNCA-212ENST00000611107 POTEAQ6S8J7 498 aa12.66□□□□□ -0.38
SNCA-212ENST00000611107 PRAM1Q96QH2 718 aa12.66□□□□□ -0.38
SNCA-212ENST00000611107 ARHGEF28Q8N1W1 1705 aaKnown RBP12.65□□□□□ -0.38
SNCA-212ENST00000611107 NBPF1Q3BBV0 1214 aa12.65□□□□□ -0.38
SNCA-212ENST00000611107 TRAK1Q9UPV9 953 aa12.65□□□□□ -0.38
SNCA-212ENST00000611107 DLC1Q96QB1 1528 aa12.64□□□□□ -0.39
SNCA-212ENST00000611107 XPCQ01831 940 aaPredicted RBP12.64□□□□□ -0.39
SNCA-212ENST00000611107 KIAA1210Q9ULL0 1709 aa12.63□□□□□ -0.39
SNCA-212ENST00000611107 L3MBTL2Q969R5 705 aa12.63□□□□□ -0.39
SNCA-212ENST00000611107 SIRT1Q96EB6 747 aa12.63□□□□□ -0.39
SNCA-212ENST00000611107 PNPLA6Q8IY17 1366 aa12.63□□□□□ -0.39
SNCA-212ENST00000611107 PXDNQ92626 1479 aa12.63□□□□□ -0.39
SNCA-212ENST00000611107 NUTM2BA6NNL0 878 aaPredicted RBP12.62□□□□□ -0.39
SNCA-212ENST00000611107 NUTM2EB1AL46 878 aaPredicted RBP12.62□□□□□ -0.39
SNCA-212ENST00000611107 ESCO1Q5FWF5 840 aa12.62□□□□□ -0.39
SNCA-212ENST00000611107 NUTM2AQ8IVF1 878 aaPredicted RBP12.62□□□□□ -0.39
SNCA-212ENST00000611107 PHF23Q9BUL5 403 aaPredicted RBP12.62□□□□□ -0.39
SNCA-212ENST00000611107 HIRIP3Q9BW71 556 aaPredicted RBP12.62□□□□□ -0.39
SNCA-212ENST00000611107 SOS2Q07890 1332 aaPredicted RBP12.62□□□□□ -0.39
SNCA-212ENST00000611107 MINK1Q8N4C8 1332 aaPredicted RBP12.61□□□□□ -0.39
SNCA-212ENST00000611107 PRR36Q9H6K5 1346 aa12.61□□□□□ -0.39
SNCA-212ENST00000611107 ADGRB2O60241 1585 aa12.6□□□□□ -0.39
SNCA-212ENST00000611107 SOCS7O14512 581 aa12.6□□□□□ -0.39
SNCA-212ENST00000611107 FOXO3O43524 673 aa12.6□□□□□ -0.39
SNCA-212ENST00000611107 NEUROD1Q13562 356 aa12.6□□□□□ -0.39
SNCA-212ENST00000611107 TRPM1Q7Z4N2 1603 aa12.59□□□□□ -0.39
SNCA-212ENST00000611107 NBPF8Q3BBV2 869 aa12.58□□□□□ -0.4
SNCA-212ENST00000611107 SPATA31A6Q5VVP1 1343 aa12.58□□□□□ -0.4
SNCA-212ENST00000611107 LRRC59Q96AG4 307 aaKnown RBP12.57□□□□□ -0.4
SNCA-212ENST00000611107 POGKQ9P215 609 aa12.57□□□□□ -0.4
SNCA-212ENST00000611107 COL22A1Q8NFW1 1626 aaPredicted RBP12.57□□□□□ -0.4
SNCA-212ENST00000611107 KIF1AQ12756 1690 aa12.55□□□□□ -0.4
SNCA-212ENST00000611107 TRPM3Q9HCF6 1732 aaPredicted RBP12.55□□□□□ -0.4
SNCA-212ENST00000611107 PMFBP1Q8TBY8 1022 aa12.55□□□□□ -0.4
SNCA-212ENST00000611107 STAC3Q96MF2 364 aa12.55□□□□□ -0.4
SNCA-212ENST00000611107 PHF8Q9UPP1 1060 aa12.54□□□□□ -0.4
SNCA-212ENST00000611107 TULP4Q9NRJ4 1543 aa12.53□□□□□ -0.4
SNCA-212ENST00000611107 WASLO00401 505 aaPredicted RBP12.53□□□□□ -0.4
SNCA-212ENST00000611107 ADAMTS2O95450 1211 aa12.53□□□□□ -0.4
SNCA-212ENST00000611107 KRT28Q7Z3Y7 464 aa12.53□□□□□ -0.4
SNCA-212ENST00000611107 NPHP3Q7Z494 1330 aa12.53□□□□□ -0.4
SNCA-212ENST00000611107 ABCA3Q99758 1704 aa12.53□□□□□ -0.4
SNCA-212ENST00000611107 ATP7BP35670 1465 aa12.53□□□□□ -0.4
SNCA-212ENST00000611107 QRICH2Q9H0J4 1663 aa12.52□□□□□ -0.4
SNCA-212ENST00000611107 MARF1Q9Y4F3 1742 aaKnown RBP12.52□□□□□ -0.41
SNCA-212ENST00000611107 MEX3CQ5U5Q3 659 aaKnown RBP12.52□□□□□ -0.41
SNCA-212ENST00000611107 AFF2P51816 1311 aa12.52□□□□□ -0.41
SNCA-212ENST00000611107 SPATA31A3Q5VYP0 1347 aa12.52□□□□□ -0.41
SNCA-212ENST00000611107 ANKARQ7Z5J8 1434 aa12.52□□□□□ -0.41
SNCA-212ENST00000611107 TOPAZ1Q8N9V7 1692 aa12.51□□□□□ -0.41
SNCA-212ENST00000611107 PLEKHG5O94827 1062 aa12.51□□□□□ -0.41
SNCA-212ENST00000611107 CABLES1Q8TDN4 633 aa12.51□□□□□ -0.41
SNCA-212ENST00000611107 C8orf37Q96NL8 207 aa12.51□□□□□ -0.41
SNCA-212ENST00000611107 ALS2Q96Q42 1657 aa12.51□□□□□ -0.41
SNCA-212ENST00000611107 CDK19Q9BWU1 502 aa12.5□□□□□ -0.41
SNCA-212ENST00000611107 CRYBG1Q9Y4K1 1723 aa12.49□□□□□ -0.41
SNCA-212ENST00000611107 NUDT16Q96DE0 195 aaKnown RBP12.49□□□□□ -0.41
SNCA-212ENST00000611107 CLSPNQ9HAW4 1339 aa12.48□□□□□ -0.41
SNCA-212ENST00000611107 TNS3Q68CZ2 1445 aa12.47□□□□□ -0.41
SNCA-212ENST00000611107 ITSN1Q15811 1721 aa12.46□□□□□ -0.41
SNCA-212ENST00000611107 CABP2Q9NPB3 220 aa12.46□□□□□ -0.41
SNCA-212ENST00000611107 BCL9LQ86UU0 1499 aa12.46□□□□□ -0.42
SNCA-212ENST00000611107 SBNO1A3KN83 1393 aa12.45□□□□□ -0.42
SNCA-212ENST00000611107 TONSLQ96HA7 1378 aa12.45□□□□□ -0.42
SNCA-212ENST00000611107 CENPJQ9HC77 1338 aaPredicted RBP12.45□□□□□ -0.42
SNCA-212ENST00000611107 PSME1Q06323 249 aa12.45□□□□□ -0.42
SNCA-212ENST00000611107 NGLY1Q96IV0 654 aa12.45□□□□□ -0.42
SNCA-212ENST00000611107 RALGAPBQ86X10 1494 aa12.45□□□□□ -0.42
SNCA-212ENST00000611107 ROCK2O75116 1388 aaKnown RBP12.44□□□□□ -0.42
SNCA-212ENST00000611107 GPRASP1Q5JY77 1395 aa12.44□□□□□ -0.42
SNCA-212ENST00000611107 ZNF772Q68DY9 489 aaPredicted RBP12.44□□□□□ -0.42
SNCA-212ENST00000611107 FNBP4Q8N3X1 1017 aaPredicted RBP12.44□□□□□ -0.42
SNCA-212ENST00000611107 QTRT2Q9H974 415 aaKnown RBP12.44□□□□□ -0.42
SNCA-212ENST00000611107 RGS12O14924 1447 aa12.44□□□□□ -0.42
SNCA-212ENST00000611107 ACEP12821 1306 aa12.43□□□□□ -0.42
SNCA-212ENST00000611107 PLCH1Q4KWH8 1693 aa12.43□□□□□ -0.42
SNCA-212ENST00000611107 LMOD2Q6P5Q4 547 aa12.43□□□□□ -0.42
SNCA-212ENST00000611107 ATRNO75882 1429 aa12.43□□□□□ -0.42
SNCA-212ENST00000611107 POLR3AO14802 1390 aaPredicted RBP12.43□□□□□ -0.42
SNCA-212ENST00000611107 SLIT2O94813 1529 aa12.42□□□□□ -0.42
SNCA-212ENST00000611107 NUTM2GQ5VZR2 741 aa12.42□□□□□ -0.42
SNCA-212ENST00000611107 NGDNQ8NEJ9 315 aaKnown RBP12.42□□□□□ -0.42
SNCA-212ENST00000611107 CCER1Q8TC90 406 aaPredicted RBP12.42□□□□□ -0.42
SNCA-212ENST00000611107 PLEKHG3A1L390 1219 aa12.41□□□□□ -0.42
SNCA-212ENST00000611107 RXRBP28702 533 aa12.41□□□□□ -0.42
SNCA-212ENST00000611107 USP21Q9UK80 565 aa12.41□□□□□ -0.42
SNCA-212ENST00000611107 PHRF1Q9P1Y6 1649 aaKnown RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms