RNA–Protein interactions for RNA: ENST00000610289.2

PRAMEF28P-201, Transcript of PRAME family member 28, pseudogene, humanhuman

BASIC

Gene PRAMEF28P, Length 1,450 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF28P-201ENST00000610289 USP21Q9UK80 565 aa16.18■□□□□ 0.18
PRAMEF28P-201ENST00000610289 FNBP4Q8N3X1 1017 aaPredicted RBP16.17■□□□□ 0.18
PRAMEF28P-201ENST00000610289 RGL3Q3MIN7 710 aa16.16■□□□□ 0.18
PRAMEF28P-201ENST00000610289 WAPLQ7Z5K2 1190 aa16.16■□□□□ 0.18
PRAMEF28P-201ENST00000610289 PPLO60437 1756 aa16.16■□□□□ 0.18
PRAMEF28P-201ENST00000610289 FOXO3O43524 673 aa16.16■□□□□ 0.18
PRAMEF28P-201ENST00000610289 STK26Q9P289 416 aa16.16■□□□□ 0.18
PRAMEF28P-201ENST00000610289 TRPC5Q9UL62 973 aaPredicted RBP16.16■□□□□ 0.18
PRAMEF28P-201ENST00000610289 XPCQ01831 940 aaPredicted RBP16.15■□□□□ 0.18
PRAMEF28P-201ENST00000610289 NPHP3Q7Z494 1330 aa16.15■□□□□ 0.18
PRAMEF28P-201ENST00000610289 NUTM2FA1L443 756 aa16.14■□□□□ 0.17
PRAMEF28P-201ENST00000610289 TMEM132EQ6IEE7 984 aa16.13■□□□□ 0.17
PRAMEF28P-201ENST00000610289 SPATA31E1Q6ZUB1 1445 aa16.13■□□□□ 0.17
PRAMEF28P-201ENST00000610289 MPHOSPH9Q99550 1183 aa16.12■□□□□ 0.17
PRAMEF28P-201ENST00000610289 CCDC144AA2RUR9 1427 aa16.12■□□□□ 0.17
PRAMEF28P-201ENST00000610289 MYOM2P54296 1465 aa16.12■□□□□ 0.17
PRAMEF28P-201ENST00000610289 LRPPRCP42704 1394 aaKnown RBP16.11■□□□□ 0.17
PRAMEF28P-201ENST00000610289 ATRNO75882 1429 aa16.11■□□□□ 0.17
PRAMEF28P-201ENST00000610289 PXDNQ92626 1479 aa16.11■□□□□ 0.17
PRAMEF28P-201ENST00000610289 CDC42BPGQ6DT37 1551 aa16.11■□□□□ 0.17
PRAMEF28P-201ENST00000610289 EP400Q96L91 3159 aa16.11■□□□□ 0.17
PRAMEF28P-201ENST00000610289 ABCC11Q96J66 1382 aa16.1■□□□□ 0.17
PRAMEF28P-201ENST00000610289 ANKRD30BQ9BXX2 1392 aa16.1■□□□□ 0.17
PRAMEF28P-201ENST00000610289 PLEKHH1Q9ULM0 1364 aa16.1■□□□□ 0.17
PRAMEF28P-201ENST00000610289 TECPR2O15040 1411 aa16.1■□□□□ 0.17
PRAMEF28P-201ENST00000610289 ATAD2Q6PL18 1390 aa16.09■□□□□ 0.17
PRAMEF28P-201ENST00000610289 BCL9LQ86UU0 1499 aa16.09■□□□□ 0.17
PRAMEF28P-201ENST00000610289 COL22A1Q8NFW1 1626 aaPredicted RBP16.09■□□□□ 0.17
PRAMEF28P-201ENST00000610289 GJD4Q96KN9 370 aaPredicted RBP16.06■□□□□ 0.16
PRAMEF28P-201ENST00000610289 PIK3C2GO75747 1445 aa16.06■□□□□ 0.16
PRAMEF28P-201ENST00000610289 SPATA31A3Q5VYP0 1347 aa16.05■□□□□ 0.16
PRAMEF28P-201ENST00000610289 SIRT1Q96EB6 747 aa16.05■□□□□ 0.16
PRAMEF28P-201ENST00000610289 YTHDC2Q9H6S0 1430 aaKnown RBP16.05■□□□□ 0.16
PRAMEF28P-201ENST00000610289 C14orf93Q9H972 538 aaKnown RBP16.04■□□□□ 0.16
PRAMEF28P-201ENST00000610289 KRT28Q7Z3Y7 464 aa16.03■□□□□ 0.16
PRAMEF28P-201ENST00000610289 UNC5CLQ8IV45 518 aa16.03■□□□□ 0.16
PRAMEF28P-201ENST00000610289 CFAP70Q5T0N1 1121 aa16.02■□□□□ 0.15
PRAMEF28P-201ENST00000610289 IFT172Q9UG01 1749 aa16.02■□□□□ 0.15
PRAMEF28P-201ENST00000610289 CCDC125Q86Z20 511 aa16.01■□□□□ 0.15
PRAMEF28P-201ENST00000610289 PHF8Q9UPP1 1060 aa16.01■□□□□ 0.15
PRAMEF28P-201ENST00000610289 SLIT2O94813 1529 aa15.99■□□□□ 0.15
PRAMEF28P-201ENST00000610289 KNDC1Q76NI1 1749 aa15.99■□□□□ 0.15
PRAMEF28P-201ENST00000610289 CABLES1Q8TDN4 633 aa15.99■□□□□ 0.15
PRAMEF28P-201ENST00000610289 FMN2Q9NZ56 1722 aa15.99■□□□□ 0.15
PRAMEF28P-201ENST00000610289 MARF1Q9Y4F3 1742 aaKnown RBP15.99■□□□□ 0.15
PRAMEF28P-201ENST00000610289 SAFB2Q14151 953 aaKnown RBP eCLIP15.98■□□□□ 0.15
PRAMEF28P-201ENST00000610289 PRAM1Q96QH2 718 aa15.98■□□□□ 0.15
PRAMEF28P-201ENST00000610289 ZRANB1Q9UGI0 708 aa15.98■□□□□ 0.15
PRAMEF28P-201ENST00000610289 DHX57Q6P158 1386 aaKnown RBP15.98■□□□□ 0.15
PRAMEF28P-201ENST00000610289 RALGAPBQ86X10 1494 aa15.98■□□□□ 0.15
PRAMEF28P-201ENST00000610289 NRXN1Q9ULB1 1477 aa15.98■□□□□ 0.15
PRAMEF28P-201ENST00000610289 PLEKHG5O94827 1062 aa15.97■□□□□ 0.15
PRAMEF28P-201ENST00000610289 PSME1Q06323 249 aa15.97■□□□□ 0.15
PRAMEF28P-201ENST00000610289 HAP1P54257 671 aaPredicted RBP15.96■□□□□ 0.14
PRAMEF28P-201ENST00000610289 KIF1AQ12756 1690 aa15.96■□□□□ 0.14
PRAMEF28P-201ENST00000610289 LMOD2Q6P5Q4 547 aa15.95■□□□□ 0.14
PRAMEF28P-201ENST00000610289 TNS3Q68CZ2 1445 aa15.95■□□□□ 0.14
PRAMEF28P-201ENST00000610289 GLI3P10071 1580 aa15.95■□□□□ 0.14
PRAMEF28P-201ENST00000610289 ACIN1Q9UKV3 1341 aaKnown RBP15.95■□□□□ 0.14
PRAMEF28P-201ENST00000610289 VPS72Q15906 364 aa15.94■□□□□ 0.14
PRAMEF28P-201ENST00000610289 PMFBP1Q8TBY8 1022 aa15.94■□□□□ 0.14
PRAMEF28P-201ENST00000610289 POGKQ9P215 609 aa15.94■□□□□ 0.14
PRAMEF28P-201ENST00000610289 SBNO1A3KN83 1393 aa15.93■□□□□ 0.14
PRAMEF28P-201ENST00000610289 FAM83GA6ND36 823 aa15.93■□□□□ 0.14
PRAMEF28P-201ENST00000610289 ONECUT3O60422 494 aaPredicted RBP15.93■□□□□ 0.14
PRAMEF28P-201ENST00000610289 SEPT12Q8IYM1 358 aa15.93■□□□□ 0.14
PRAMEF28P-201ENST00000610289 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.93■□□□□ 0.14
PRAMEF28P-201ENST00000610289 RGPD8O14715 1765 aaPredicted RBP15.93■□□□□ 0.14
PRAMEF28P-201ENST00000610289 USP32Q8NFA0 1604 aa15.92■□□□□ 0.14
PRAMEF28P-201ENST00000610289 BLMP54132 1417 aaPredicted RBP15.91■□□□□ 0.14
PRAMEF28P-201ENST00000610289 DEFB132Q7Z7B7 95 aa15.91■□□□□ 0.14
PRAMEF28P-201ENST00000610289 HIRIP3Q9BW71 556 aaPredicted RBP15.91■□□□□ 0.14
PRAMEF28P-201ENST00000610289 TRAK1Q9UPV9 953 aa15.91■□□□□ 0.14
PRAMEF28P-201ENST00000610289 CCDC9Q9Y3X0 531 aaKnown RBP15.91■□□□□ 0.14
PRAMEF28P-201ENST00000610289 ARHGEF10O15013 1369 aa15.9■□□□□ 0.14
PRAMEF28P-201ENST00000610289 RAB3GAP2Q9H2M9 1393 aa15.89■□□□□ 0.13
PRAMEF28P-201ENST00000610289 ANKARQ7Z5J8 1434 aa15.89■□□□□ 0.13
PRAMEF28P-201ENST00000610289 DLC1Q96QB1 1528 aa15.89■□□□□ 0.13
PRAMEF28P-201ENST00000610289 KDM2AQ9Y2K7 1162 aa15.88■□□□□ 0.13
PRAMEF28P-201ENST00000610289 ADGRB1O14514 1584 aa15.87■□□□□ 0.13
PRAMEF28P-201ENST00000610289 KRT27Q7Z3Y8 459 aa15.87■□□□□ 0.13
PRAMEF28P-201ENST00000610289 MINK1Q8N4C8 1332 aaPredicted RBP15.87■□□□□ 0.13
PRAMEF28P-201ENST00000610289 PRR36Q9H6K5 1346 aa15.87■□□□□ 0.13
PRAMEF28P-201ENST00000610289 BRWD3Q6RI45 1802 aa15.86■□□□□ 0.13
PRAMEF28P-201ENST00000610289 DCAF11Q8TEB1 546 aa15.86■□□□□ 0.13
PRAMEF28P-201ENST00000610289 SF3B2Q13435 895 aaKnown RBP15.85■□□□□ 0.13
PRAMEF28P-201ENST00000610289 BTG4Q9NY30 223 aa15.85■□□□□ 0.13
PRAMEF28P-201ENST00000610289 WASLO00401 505 aaPredicted RBP15.84■□□□□ 0.13
PRAMEF28P-201ENST00000610289 NWD2Q9ULI1 1742 aa15.84■□□□□ 0.13
PRAMEF28P-201ENST00000610289 GPRASP1Q5JY77 1395 aa15.84■□□□□ 0.13
PRAMEF28P-201ENST00000610289 PLCH1Q4KWH8 1693 aa15.84■□□□□ 0.13
PRAMEF28P-201ENST00000610289 FAM98CQ17RN3 349 aaKnown RBP15.84■□□□□ 0.13
PRAMEF28P-201ENST00000610289 ADGRB2O60241 1585 aa15.83■□□□□ 0.12
PRAMEF28P-201ENST00000610289 A0A0G2JS52 829 aa15.83■□□□□ 0.12
PRAMEF28P-201ENST00000610289 MYT1Q01538 1121 aa15.83■□□□□ 0.12
PRAMEF28P-201ENST00000610289 ABCA3Q99758 1704 aa15.83■□□□□ 0.12
PRAMEF28P-201ENST00000610289 NGDNQ8NEJ9 315 aaKnown RBP15.81■□□□□ 0.12
PRAMEF28P-201ENST00000610289 TRPM3Q9HCF6 1732 aaPredicted RBP15.81■□□□□ 0.12
PRAMEF28P-201ENST00000610289 EIF3AQ14152 1382 aaKnown RBP15.81■□□□□ 0.12
PRAMEF28P-201ENST00000610289 PAK3O75914 559 aaPredicted RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms