RNA–Protein interactions for RNA: ENST00000609107.1

LINC02538-201, Transcript of long intergenic non-protein coding RNA 2538, humanhuman

TSL 2 BASIC

Gene LINC02538, Length 4,569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02538-201ENST00000609107 LTV1Q96GA3 475 aaPredicted RBP17.72■□□□□ 0.43
LINC02538-201ENST00000609107 C22orf23Q9BZE7 217 aa17.72■□□□□ 0.43
LINC02538-201ENST00000609107 PDZRN3Q9UPQ7 1066 aa17.72■□□□□ 0.43
LINC02538-201ENST00000609107 SYCP2Q9BX26 1530 aa17.71■□□□□ 0.43
LINC02538-201ENST00000609107 TEX14Q8IWB6 1497 aa17.71■□□□□ 0.43
LINC02538-201ENST00000609107 GOLGA6L4A6NEF3 574 aa17.71■□□□□ 0.43
LINC02538-201ENST00000609107 RAPGEF3O95398 923 aa17.71■□□□□ 0.43
LINC02538-201ENST00000609107 PRKAR2BP31323 418 aa17.71■□□□□ 0.43
LINC02538-201ENST00000609107 EIF4G3O43432 1585 aaKnown RBP17.71■□□□□ 0.43
LINC02538-201ENST00000609107 ADGRF5Q8IZF2 1346 aa17.71■□□□□ 0.43
LINC02538-201ENST00000609107 GPATCH3Q96I76 525 aa17.71■□□□□ 0.42
LINC02538-201ENST00000609107 LNPKQ9C0E8 428 aa17.71■□□□□ 0.42
LINC02538-201ENST00000609107 FOXD4L1Q9NU39 408 aa17.71■□□□□ 0.42
LINC02538-201ENST00000609107 PARD3Q8TEW0 1356 aa17.7■□□□□ 0.42
LINC02538-201ENST00000609107 MAGI3Q5TCQ9 1506 aa17.7■□□□□ 0.42
LINC02538-201ENST00000609107 GCC2Q8IWJ2 1684 aa17.7■□□□□ 0.42
LINC02538-201ENST00000609107 DHX29Q7Z478 1369 aaKnown RBP17.7■□□□□ 0.42
LINC02538-201ENST00000609107 UHRF1BP1Q6BDS2 1440 aa17.7■□□□□ 0.42
LINC02538-201ENST00000609107 CDK19Q9BWU1 502 aa17.69■□□□□ 0.42
LINC02538-201ENST00000609107 PLCB2Q00722 1185 aa17.69■□□□□ 0.42
LINC02538-201ENST00000609107 FANCAO15360 1455 aa17.69■□□□□ 0.42
LINC02538-201ENST00000609107 MSH5O43196 834 aa17.69■□□□□ 0.42
LINC02538-201ENST00000609107 SYAP1Q96A49 352 aaPredicted RBP17.69■□□□□ 0.42
LINC02538-201ENST00000609107 SKOR2Q2VWA4 1001 aaPredicted RBP17.69■□□□□ 0.42
LINC02538-201ENST00000609107 CD109Q6YHK3 1445 aa17.68■□□□□ 0.42
LINC02538-201ENST00000609107 NKTRP30414 1462 aaKnown RBP17.68■□□□□ 0.42
LINC02538-201ENST00000609107 TSR2Q969E8 191 aaKnown RBP17.68■□□□□ 0.42
LINC02538-201ENST00000609107 CABP1Q9NZU7 370 aa17.67■□□□□ 0.42
LINC02538-201ENST00000609107 DUSP27Q5VZP5 1158 aa17.67■□□□□ 0.42
LINC02538-201ENST00000609107 REC8O95072 547 aa17.67■□□□□ 0.42
LINC02538-201ENST00000609107 MVPQ14764 893 aaKnown RBP17.67■□□□□ 0.42
LINC02538-201ENST00000609107 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.66■□□□□ 0.42
LINC02538-201ENST00000609107 CSB-PGBD3P0DP91 1061 aa17.66■□□□□ 0.42
LINC02538-201ENST00000609107 ATF7IPQ6VMQ6 1270 aa17.65■□□□□ 0.42
LINC02538-201ENST00000609107 EIF2AK4Q9P2K8 1649 aaKnown RBP17.65■□□□□ 0.42
LINC02538-201ENST00000609107 C20orf194Q5TEA3 1177 aa17.65■□□□□ 0.42
LINC02538-201ENST00000609107 TARBP1Q13395 1621 aaKnown RBP17.65■□□□□ 0.42
LINC02538-201ENST00000609107 NOB1Q9ULX3 412 aaKnown RBP17.64■□□□□ 0.42
LINC02538-201ENST00000609107 TESK2Q96S53 571 aa17.64■□□□□ 0.41
LINC02538-201ENST00000609107 ZNF428Q96B54 188 aa17.63■□□□□ 0.41
LINC02538-201ENST00000609107 KDM5BQ9UGL1 1544 aa17.63■□□□□ 0.41
LINC02538-201ENST00000609107 ZNF692Q9BU19 519 aaPredicted RBP17.62■□□□□ 0.41
LINC02538-201ENST00000609107 C14orf93Q9H972 538 aaKnown RBP17.62■□□□□ 0.41
LINC02538-201ENST00000609107 TSPYL4Q9UJ04 414 aa17.62■□□□□ 0.41
LINC02538-201ENST00000609107 NAP1L2Q9ULW6 460 aaPredicted RBP17.62■□□□□ 0.41
LINC02538-201ENST00000609107 RTEL1-TNFRSF6BF6WH68 1400 aa17.62■□□□□ 0.41
LINC02538-201ENST00000609107 NOS1P29475 1434 aa17.62■□□□□ 0.41
LINC02538-201ENST00000609107 FCHSD2O94868 740 aa17.62■□□□□ 0.41
LINC02538-201ENST00000609107 GCC1Q96CN9 775 aa17.62■□□□□ 0.41
LINC02538-201ENST00000609107 INTS3Q68E01 1043 aaKnown RBP17.62■□□□□ 0.41
LINC02538-201ENST00000609107 LRPPRCP42704 1394 aaKnown RBP17.62■□□□□ 0.41
LINC02538-201ENST00000609107 TEFQ10587 303 aa17.62■□□□□ 0.41
LINC02538-201ENST00000609107 TWISTNBQ3B726 338 aaPredicted RBP17.62■□□□□ 0.41
LINC02538-201ENST00000609107 AMER1Q5JTC6 1135 aaPredicted RBP17.62■□□□□ 0.41
LINC02538-201ENST00000609107 RILPL2Q969X0 211 aa17.62■□□□□ 0.41
LINC02538-201ENST00000609107 TMPOP42166 694 aaKnown RBP17.61■□□□□ 0.41
LINC02538-201ENST00000609107 CDC45O75419 566 aa17.61■□□□□ 0.41
LINC02538-201ENST00000609107 RARSP54136 660 aaKnown RBP17.6■□□□□ 0.41
LINC02538-201ENST00000609107 DDX49Q9Y6V7 483 aaKnown RBP17.6■□□□□ 0.41
LINC02538-201ENST00000609107 ASXL1Q8IXJ9 1541 aa17.6■□□□□ 0.41
LINC02538-201ENST00000609107 NSD2O96028 1365 aa17.6■□□□□ 0.41
LINC02538-201ENST00000609107 FKBP5Q13451 457 aaPredicted RBP17.6■□□□□ 0.41
LINC02538-201ENST00000609107 ABCC11Q96J66 1382 aa17.59■□□□□ 0.41
LINC02538-201ENST00000609107 C1orf141Q5JVX7 400 aa17.59■□□□□ 0.41
LINC02538-201ENST00000609107 TXNDC2Q86VQ3 553 aa17.59■□□□□ 0.41
LINC02538-201ENST00000609107 GOLGA6L6A8MZA4 724 aa17.58■□□□□ 0.4
LINC02538-201ENST00000609107 CSPP1Q1MSJ5 1256 aa17.58■□□□□ 0.4
LINC02538-201ENST00000609107 TRAPPC8Q9Y2L5 1435 aa17.58■□□□□ 0.4
LINC02538-201ENST00000609107 NOL8Q76FK4 1167 aaKnown RBP17.58■□□□□ 0.4
LINC02538-201ENST00000609107 PER1O15534 1290 aaPredicted RBP17.57■□□□□ 0.4
LINC02538-201ENST00000609107 HTATSF1O43719 755 aaKnown RBP17.57■□□□□ 0.4
LINC02538-201ENST00000609107 GPRASP1Q5JY77 1395 aa17.56■□□□□ 0.4
LINC02538-201ENST00000609107 GAS2L2Q8NHY3 880 aa17.56■□□□□ 0.4
LINC02538-201ENST00000609107 SPATA31E1Q6ZUB1 1445 aa17.55■□□□□ 0.4
LINC02538-201ENST00000609107 COL17A1Q9UMD9 1497 aaPredicted RBP17.55■□□□□ 0.4
LINC02538-201ENST00000609107 PHF14O94880 888 aa17.55■□□□□ 0.4
LINC02538-201ENST00000609107 NUCB2P80303 420 aa17.55■□□□□ 0.4
LINC02538-201ENST00000609107 NFE2L2Q16236 605 aa17.55■□□□□ 0.4
LINC02538-201ENST00000609107 FRAT2O75474 233 aaPredicted RBP17.54■□□□□ 0.4
LINC02538-201ENST00000609107 EIF2S2P20042 333 aaKnown RBP17.54■□□□□ 0.4
LINC02538-201ENST00000609107 IDI1Q13907 227 aa17.54■□□□□ 0.4
LINC02538-201ENST00000609107 ADGBQ8N7X0 1667 aa17.54■□□□□ 0.4
LINC02538-201ENST00000609107 NRDCO43847 1150 aa17.54■□□□□ 0.4
LINC02538-201ENST00000609107 NLRP6P59044 892 aa17.53■□□□□ 0.4
LINC02538-201ENST00000609107 KIAA2012Q0VF49 1180 aa17.53■□□□□ 0.4
LINC02538-201ENST00000609107 CHAF1AQ13111 956 aaPredicted RBP17.53■□□□□ 0.4
LINC02538-201ENST00000609107 DENND4BO75064 1496 aaPredicted RBP17.53■□□□□ 0.4
LINC02538-201ENST00000609107 PKNOX2Q96KN3 472 aa17.53■□□□□ 0.4
LINC02538-201ENST00000609107 NECTIN2Q92692 538 aa17.52■□□□□ 0.4
LINC02538-201ENST00000609107 A2MP01023 1474 aa17.52■□□□□ 0.4
LINC02538-201ENST00000609107 SULT6B1Q6IMI4 303 aa17.52■□□□□ 0.4
LINC02538-201ENST00000609107 RUFY2Q8WXA3 655 aa17.52■□□□□ 0.4
LINC02538-201ENST00000609107 ABCC2Q92887 1545 aa17.52■□□□□ 0.4
LINC02538-201ENST00000609107 GNAI3P08754 354 aa17.52■□□□□ 0.39
LINC02538-201ENST00000609107 CCDC61Q9Y6R9 512 aa17.52■□□□□ 0.39
LINC02538-201ENST00000609107 PSME1Q06323 249 aa17.51■□□□□ 0.39
LINC02538-201ENST00000609107 C9orf78Q9NZ63 289 aaPredicted RBP17.51■□□□□ 0.39
LINC02538-201ENST00000609107 PIK3C2GO75747 1445 aa17.51■□□□□ 0.39
LINC02538-201ENST00000609107 CEP170Q5SW79 1584 aa17.51■□□□□ 0.39
LINC02538-201ENST00000609107 WDR7Q9Y4E6 1490 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms