RNA–Protein interactions for RNA: ENST00000608903.5

CTCFL-221, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-221ENST00000608903 POGKQ9P215 609 aa16.11■□□□□ 0.17
CTCFL-221ENST00000608903 TULP4Q9NRJ4 1543 aa16.1■□□□□ 0.17
CTCFL-221ENST00000608903 MINK1Q8N4C8 1332 aaPredicted RBP16.1■□□□□ 0.17
CTCFL-221ENST00000608903 PIK3R4Q99570 1358 aa16.1■□□□□ 0.17
CTCFL-221ENST00000608903 FAM135BQ49AJ0 1406 aa16.1■□□□□ 0.17
CTCFL-221ENST00000608903 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.09■□□□□ 0.17
CTCFL-221ENST00000608903 PTCH1Q13635 1447 aa16.06■□□□□ 0.16
CTCFL-221ENST00000608903 STRCP1A6NGW2 1772 aa16.06■□□□□ 0.16
CTCFL-221ENST00000608903 RBM33Q96EV2 1170 aaKnown RBP16.05■□□□□ 0.16
CTCFL-221ENST00000608903 CABP2Q9NPB3 220 aa16.05■□□□□ 0.16
CTCFL-221ENST00000608903 NWD1Q149M9 1564 aa16.04■□□□□ 0.16
CTCFL-221ENST00000608903 MYOM1P52179 1685 aa16.04■□□□□ 0.16
CTCFL-221ENST00000608903 CDK19Q9BWU1 502 aa16.03■□□□□ 0.16
CTCFL-221ENST00000608903 EVC2Q86UK5 1308 aa16.03■□□□□ 0.16
CTCFL-221ENST00000608903 SLC24A1O60721 1099 aa16.01■□□□□ 0.15
CTCFL-221ENST00000608903 WASLO00401 505 aaPredicted RBP16■□□□□ 0.15
CTCFL-221ENST00000608903 CDCA8Q53HL2 280 aa16■□□□□ 0.15
CTCFL-221ENST00000608903 MIER1Q8N108 512 aa16■□□□□ 0.15
CTCFL-221ENST00000608903 PUS7Q96PZ0 661 aaKnown RBP15.99■□□□□ 0.15
CTCFL-221ENST00000608903 SLC12A5Q9H2X9 1139 aa15.99■□□□□ 0.15
CTCFL-221ENST00000608903 ADGRB2O60241 1585 aa15.99■□□□□ 0.15
CTCFL-221ENST00000608903 SRPK2P78362 688 aaKnown RBP15.98■□□□□ 0.15
CTCFL-221ENST00000608903 PANK3Q9H999 370 aa15.98■□□□□ 0.15
CTCFL-221ENST00000608903 PER1O15534 1290 aaPredicted RBP15.98■□□□□ 0.15
CTCFL-221ENST00000608903 PRR36Q9H6K5 1346 aa15.98■□□□□ 0.15
CTCFL-221ENST00000608903 ZNF335Q9H4Z2 1342 aaPredicted RBP15.97■□□□□ 0.15
CTCFL-221ENST00000608903 NALCNQ8IZF0 1738 aa15.97■□□□□ 0.15
CTCFL-221ENST00000608903 PROSER2Q86WR7 435 aaPredicted RBP15.96■□□□□ 0.15
CTCFL-221ENST00000608903 CARD14Q9BXL6 1004 aa15.95■□□□□ 0.14
CTCFL-221ENST00000608903 NKTRP30414 1462 aaKnown RBP15.94■□□□□ 0.14
CTCFL-221ENST00000608903 NUTM2FA1L443 756 aa15.94■□□□□ 0.14
CTCFL-221ENST00000608903 TMC1Q8TDI8 760 aa15.94■□□□□ 0.14
CTCFL-221ENST00000608903 USP32Q8NFA0 1604 aa15.94■□□□□ 0.14
CTCFL-221ENST00000608903 NUDT16Q96DE0 195 aaKnown RBP15.94■□□□□ 0.14
CTCFL-221ENST00000608903 ATP7BP35670 1465 aa15.93■□□□□ 0.14
CTCFL-221ENST00000608903 CD163L1Q9NR16 1453 aa15.93■□□□□ 0.14
CTCFL-221ENST00000608903 CABP1Q9NZU7 370 aa15.92■□□□□ 0.14
CTCFL-221ENST00000608903 ATAD2Q6PL18 1390 aa15.92■□□□□ 0.14
CTCFL-221ENST00000608903 ADGRL3Q9HAR2 1447 aa15.92■□□□□ 0.14
CTCFL-221ENST00000608903 XIRP1Q702N8 1843 aaKnown RBP15.92■□□□□ 0.14
CTCFL-221ENST00000608903 TMEM94Q12767 1356 aa15.92■□□□□ 0.14
CTCFL-221ENST00000608903 RGPD8O14715 1765 aaPredicted RBP15.92■□□□□ 0.14
CTCFL-221ENST00000608903 DMRT2Q9Y5R5 561 aa15.91■□□□□ 0.14
CTCFL-221ENST00000608903 FMN2Q9NZ56 1722 aa15.9■□□□□ 0.14
CTCFL-221ENST00000608903 LRRC7Q96NW7 1537 aa15.9■□□□□ 0.14
CTCFL-221ENST00000608903 TOPAZ1Q8N9V7 1692 aa15.89■□□□□ 0.13
CTCFL-221ENST00000608903 CNGB1Q14028 1251 aaPredicted RBP15.89■□□□□ 0.13
CTCFL-221ENST00000608903 CCDC61Q9Y6R9 512 aa15.89■□□□□ 0.13
CTCFL-221ENST00000608903 CDC42BPGQ6DT37 1551 aa15.89■□□□□ 0.13
CTCFL-221ENST00000608903 PPIP5K1Q6PFW1 1433 aa15.89■□□□□ 0.13
CTCFL-221ENST00000608903 A0A1W2PP64 1363 aa15.88■□□□□ 0.13
CTCFL-221ENST00000608903 ANKRD36BQ8N2N9 1353 aa15.87■□□□□ 0.13
CTCFL-221ENST00000608903 AMER1Q5JTC6 1135 aaPredicted RBP15.87■□□□□ 0.13
CTCFL-221ENST00000608903 C14orf37Q86TY3 774 aa15.86■□□□□ 0.13
CTCFL-221ENST00000608903 PRKRIP1Q9H875 184 aaPredicted RBP15.86■□□□□ 0.13
CTCFL-221ENST00000608903 NINLQ9Y2I6 1382 aa15.86■□□□□ 0.13
CTCFL-221ENST00000608903 C19orf44Q9H6X5 657 aa15.86■□□□□ 0.13
CTCFL-221ENST00000608903 CPSF1Q10570 1443 aaKnown RBP15.85■□□□□ 0.13
CTCFL-221ENST00000608903 ANP32CO43423 234 aa15.85■□□□□ 0.13
CTCFL-221ENST00000608903 NSD3Q9BZ95 1437 aa15.85■□□□□ 0.13
CTCFL-221ENST00000608903 NCOA3Q9Y6Q9 1424 aa15.85■□□□□ 0.13
CTCFL-221ENST00000608903 PLEKHG3A1L390 1219 aa15.85■□□□□ 0.13
CTCFL-221ENST00000608903 ANKARQ7Z5J8 1434 aa15.84■□□□□ 0.13
CTCFL-221ENST00000608903 CC2D1BQ5T0F9 858 aaKnown RBP15.84■□□□□ 0.13
CTCFL-221ENST00000608903 PMFBP1Q8TBY8 1022 aa15.83■□□□□ 0.13
CTCFL-221ENST00000608903 KNSTRNQ9Y448 316 aa15.83■□□□□ 0.13
CTCFL-221ENST00000608903 LTBP4Q8N2S1 1624 aa15.83■□□□□ 0.12
CTCFL-221ENST00000608903 AKAP12Q02952 1782 aa15.82■□□□□ 0.12
CTCFL-221ENST00000608903 ACEP12821 1306 aa15.82■□□□□ 0.12
CTCFL-221ENST00000608903 TERF2IPQ9NYB0 399 aa15.82■□□□□ 0.12
CTCFL-221ENST00000608903 CCDC184Q52MB2 194 aa15.81■□□□□ 0.12
CTCFL-221ENST00000608903 ORAI2Q96SN7 254 aa15.81■□□□□ 0.12
CTCFL-221ENST00000608903 ITSN1Q15811 1721 aa15.8■□□□□ 0.12
CTCFL-221ENST00000608903 MST1RQ04912 1400 aa15.8■□□□□ 0.12
CTCFL-221ENST00000608903 HDGFL2Q7Z4V5 671 aaPredicted RBP15.8■□□□□ 0.12
CTCFL-221ENST00000608903 MON2Q7Z3U7 1717 aa15.8■□□□□ 0.12
CTCFL-221ENST00000608903 PARD3Q8TEW0 1356 aa15.8■□□□□ 0.12
CTCFL-221ENST00000608903 C1orf167Q5SNV9 1468 aa15.79■□□□□ 0.12
CTCFL-221ENST00000608903 POLR3AO14802 1390 aaPredicted RBP15.79■□□□□ 0.12
CTCFL-221ENST00000608903 KTN1Q86UP2 1357 aaKnown RBP15.79■□□□□ 0.12
CTCFL-221ENST00000608903 NPC1L1Q9UHC9 1359 aa15.79■□□□□ 0.12
CTCFL-221ENST00000608903 DCCP43146 1447 aa15.78■□□□□ 0.12
CTCFL-221ENST00000608903 YTHDC1Q96MU7 727 aaKnown RBP15.78■□□□□ 0.12
CTCFL-221ENST00000608903 MSH6P52701 1360 aa15.78■□□□□ 0.12
CTCFL-221ENST00000608903 FYB1O15117 783 aa15.77■□□□□ 0.12
CTCFL-221ENST00000608903 ATF3P18847 181 aa15.77■□□□□ 0.12
CTCFL-221ENST00000608903 ESCO1Q5FWF5 840 aa15.77■□□□□ 0.12
CTCFL-221ENST00000608903 PHF8Q9UPP1 1060 aa15.77■□□□□ 0.12
CTCFL-221ENST00000608903 SSH2Q76I76 1423 aa15.77■□□□□ 0.12
CTCFL-221ENST00000608903 CENPBP07199 599 aaPredicted RBP15.77■□□□□ 0.11
CTCFL-221ENST00000608903 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.77■□□□□ 0.11
CTCFL-221ENST00000608903 ZRANB1Q9UGI0 708 aa15.77■□□□□ 0.11
CTCFL-221ENST00000608903 USP6P35125 1406 aa15.76■□□□□ 0.11
CTCFL-221ENST00000608903 NRKQ7Z2Y5 1582 aa15.76■□□□□ 0.11
CTCFL-221ENST00000608903 ZNF692Q9BU19 519 aaPredicted RBP15.76■□□□□ 0.11
CTCFL-221ENST00000608903 EDC4Q6P2E9 1401 aaKnown RBP15.75■□□□□ 0.11
CTCFL-221ENST00000608903 CGNL1Q0VF96 1302 aa15.75■□□□□ 0.11
CTCFL-221ENST00000608903 RALBP1Q15311 655 aa15.75■□□□□ 0.11
CTCFL-221ENST00000608903 CADPS2Q86UW7 1296 aa15.75■□□□□ 0.11
CTCFL-221ENST00000608903 NGDNQ8NEJ9 315 aaKnown RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms