RNA–Protein interactions for RNA: ENST00000608674.5

TOM1-218, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1, Length 541 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-218ENST00000608674 DHX57Q6P158 1386 aaKnown RBP19.35■□□□□ 0.69
TOM1-218ENST00000608674 IFT172Q9UG01 1749 aa19.35■□□□□ 0.69
TOM1-218ENST00000608674 MYOM2P54296 1465 aa19.35■□□□□ 0.69
TOM1-218ENST00000608674 ESCO1Q5FWF5 840 aa19.34■□□□□ 0.69
TOM1-218ENST00000608674 KDM2AQ9Y2K7 1162 aa19.34■□□□□ 0.69
TOM1-218ENST00000608674 DCAF11Q8TEB1 546 aa19.33■□□□□ 0.68
TOM1-218ENST00000608674 SIRT1Q96EB6 747 aa19.33■□□□□ 0.68
TOM1-218ENST00000608674 LRP6O75581 1613 aa19.33■□□□□ 0.68
TOM1-218ENST00000608674 ZNF772Q68DY9 489 aaPredicted RBP19.32■□□□□ 0.68
TOM1-218ENST00000608674 NRXN1Q9ULB1 1477 aa19.32■□□□□ 0.68
TOM1-218ENST00000608674 SHPRHQ149N8 1683 aa19.32■□□□□ 0.68
TOM1-218ENST00000608674 PLEKHH1Q9ULM0 1364 aa19.32■□□□□ 0.68
TOM1-218ENST00000608674 NUTM2FA1L443 756 aa19.31■□□□□ 0.68
TOM1-218ENST00000608674 STAC3Q96MF2 364 aa19.31■□□□□ 0.68
TOM1-218ENST00000608674 NHSL1Q5SYE7 1610 aa19.31■□□□□ 0.68
TOM1-218ENST00000608674 SOS2Q07890 1332 aaPredicted RBP19.29■□□□□ 0.68
TOM1-218ENST00000608674 NPHP3Q7Z494 1330 aa19.29■□□□□ 0.68
TOM1-218ENST00000608674 CDC42BPGQ6DT37 1551 aa19.29■□□□□ 0.68
TOM1-218ENST00000608674 POGKQ9P215 609 aa19.29■□□□□ 0.68
TOM1-218ENST00000608674 PNPLA6Q8IY17 1366 aa19.29■□□□□ 0.68
TOM1-218ENST00000608674 FOXO3O43524 673 aa19.27■□□□□ 0.68
TOM1-218ENST00000608674 SAFB2Q14151 953 aaKnown RBP eCLIP19.27■□□□□ 0.68
TOM1-218ENST00000608674 PRAM1Q96QH2 718 aa19.27■□□□□ 0.68
TOM1-218ENST00000608674 C8orf37Q96NL8 207 aa19.25■□□□□ 0.67
TOM1-218ENST00000608674 KNDC1Q76NI1 1749 aa19.25■□□□□ 0.67
TOM1-218ENST00000608674 LAMC1P11047 1609 aa19.25■□□□□ 0.67
TOM1-218ENST00000608674 AFF2P51816 1311 aa19.25■□□□□ 0.67
TOM1-218ENST00000608674 TRAK1Q9UPV9 953 aa19.24■□□□□ 0.67
TOM1-218ENST00000608674 ADAMTS2O95450 1211 aa19.23■□□□□ 0.67
TOM1-218ENST00000608674 XPCQ01831 940 aaPredicted RBP19.23■□□□□ 0.67
TOM1-218ENST00000608674 NGLY1Q96IV0 654 aa19.22■□□□□ 0.67
TOM1-218ENST00000608674 RXRBP28702 533 aa19.21■□□□□ 0.67
TOM1-218ENST00000608674 PHF8Q9UPP1 1060 aa19.19■□□□□ 0.66
TOM1-218ENST00000608674 DLC1Q96QB1 1528 aa19.19■□□□□ 0.66
TOM1-218ENST00000608674 PXDNQ92626 1479 aa19.17■□□□□ 0.66
TOM1-218ENST00000608674 KRT28Q7Z3Y7 464 aa19.17■□□□□ 0.66
TOM1-218ENST00000608674 HIRIP3Q9BW71 556 aaPredicted RBP19.17■□□□□ 0.66
TOM1-218ENST00000608674 QTRT2Q9H974 415 aaKnown RBP19.17■□□□□ 0.66
TOM1-218ENST00000608674 ADGRB1O14514 1584 aa19.17■□□□□ 0.66
TOM1-218ENST00000608674 MINK1Q8N4C8 1332 aaPredicted RBP19.17■□□□□ 0.66
TOM1-218ENST00000608674 PSME1Q06323 249 aa19.16■□□□□ 0.66
TOM1-218ENST00000608674 FMN2Q9NZ56 1722 aa19.15■□□□□ 0.66
TOM1-218ENST00000608674 SPATA31A3Q5VYP0 1347 aa19.13■□□□□ 0.65
TOM1-218ENST00000608674 EIF3AQ14152 1382 aaKnown RBP19.12■□□□□ 0.65
TOM1-218ENST00000608674 RBM6P78332 1123 aaKnown RBP19.12■□□□□ 0.65
TOM1-218ENST00000608674 PMFBP1Q8TBY8 1022 aa19.12■□□□□ 0.65
TOM1-218ENST00000608674 USP21Q9UK80 565 aa19.12■□□□□ 0.65
TOM1-218ENST00000608674 KIF1AQ12756 1690 aa19.11■□□□□ 0.65
TOM1-218ENST00000608674 ANKARQ7Z5J8 1434 aa19.11■□□□□ 0.65
TOM1-218ENST00000608674 WASLO00401 505 aaPredicted RBP19.11■□□□□ 0.65
TOM1-218ENST00000608674 LMOD2Q6P5Q4 547 aa19.11■□□□□ 0.65
TOM1-218ENST00000608674 HAP1P54257 671 aaPredicted RBP19.1■□□□□ 0.65
TOM1-218ENST00000608674 FNBP4Q8N3X1 1017 aaPredicted RBP19.09■□□□□ 0.65
TOM1-218ENST00000608674 TRPC5Q9UL62 973 aaPredicted RBP19.09■□□□□ 0.65
TOM1-218ENST00000608674 COL22A1Q8NFW1 1626 aaPredicted RBP19.08■□□□□ 0.65
TOM1-218ENST00000608674 PLEKHG5O94827 1062 aa19.07■□□□□ 0.64
TOM1-218ENST00000608674 CDK12Q9NYV4 1490 aaPredicted RBP19.07■□□□□ 0.64
TOM1-218ENST00000608674 TNS3Q68CZ2 1445 aa19.07■□□□□ 0.64
TOM1-218ENST00000608674 SBNO1A3KN83 1393 aa19.06■□□□□ 0.64
TOM1-218ENST00000608674 GPRASP1Q5JY77 1395 aa19.06■□□□□ 0.64
TOM1-218ENST00000608674 ADGRB2O60241 1585 aa19.06■□□□□ 0.64
TOM1-218ENST00000608674 NEUROD1Q13562 356 aa19.06■□□□□ 0.64
TOM1-218ENST00000608674 NBPF1Q3BBV0 1214 aa19.06■□□□□ 0.64
TOM1-218ENST00000608674 NGDNQ8NEJ9 315 aaKnown RBP19.06■□□□□ 0.64
TOM1-218ENST00000608674 L3MBTL2Q969R5 705 aa19.05■□□□□ 0.64
TOM1-218ENST00000608674 SIN3AQ96ST3 1273 aa19.05■□□□□ 0.64
TOM1-218ENST00000608674 ARHGEF10O15013 1369 aa19.05■□□□□ 0.64
TOM1-218ENST00000608674 PRR36Q9H6K5 1346 aa19.04■□□□□ 0.64
TOM1-218ENST00000608674 CABLES1Q8TDN4 633 aa19.03■□□□□ 0.64
TOM1-218ENST00000608674 TULP4Q9NRJ4 1543 aa19.03■□□□□ 0.64
TOM1-218ENST00000608674 RGPD8O14715 1765 aaPredicted RBP19.03■□□□□ 0.64
TOM1-218ENST00000608674 NUDT16Q96DE0 195 aaKnown RBP19.02■□□□□ 0.64
TOM1-218ENST00000608674 CDK19Q9BWU1 502 aa19.02■□□□□ 0.64
TOM1-218ENST00000608674 UPF1Q92900 1129 aaKnown RBP eCLIP19.01■□□□□ 0.63
TOM1-218ENST00000608674 RGS12O14924 1447 aa19■□□□□ 0.63
TOM1-218ENST00000608674 PAK3O75914 559 aaPredicted RBP19■□□□□ 0.63
TOM1-218ENST00000608674 USP32Q8NFA0 1604 aa19■□□□□ 0.63
TOM1-218ENST00000608674 ATRNO75882 1429 aa19■□□□□ 0.63
TOM1-218ENST00000608674 BCL9LQ86UU0 1499 aa18.99■□□□□ 0.63
TOM1-218ENST00000608674 UNC5CLQ8IV45 518 aa18.99■□□□□ 0.63
TOM1-218ENST00000608674 KIAA1210Q9ULL0 1709 aa18.99■□□□□ 0.63
TOM1-218ENST00000608674 CENPJQ9HC77 1338 aaPredicted RBP18.99■□□□□ 0.63
TOM1-218ENST00000608674 ARHGEF28Q8N1W1 1705 aaKnown RBP18.98■□□□□ 0.63
TOM1-218ENST00000608674 GJD4Q96KN9 370 aaPredicted RBP18.97■□□□□ 0.63
TOM1-218ENST00000608674 CCDC61Q9Y6R9 512 aa18.96■□□□□ 0.63
TOM1-218ENST00000608674 SRPK2P78362 688 aaKnown RBP18.95■□□□□ 0.62
TOM1-218ENST00000608674 ATP7BP35670 1465 aa18.95■□□□□ 0.62
TOM1-218ENST00000608674 TRIM26Q12899 539 aaPredicted RBP18.94■□□□□ 0.62
TOM1-218ENST00000608674 SLIT2O94813 1529 aa18.94■□□□□ 0.62
TOM1-218ENST00000608674 CCDC9Q9Y3X0 531 aaKnown RBP18.93■□□□□ 0.62
TOM1-218ENST00000608674 MARF1Q9Y4F3 1742 aaKnown RBP18.93■□□□□ 0.62
TOM1-218ENST00000608674 PLEKHG3A1L390 1219 aa18.92■□□□□ 0.62
TOM1-218ENST00000608674 FAM83GA6ND36 823 aa18.92■□□□□ 0.62
TOM1-218ENST00000608674 NBPF8Q3BBV2 869 aa18.92■□□□□ 0.62
TOM1-218ENST00000608674 ACEP12821 1306 aa18.92■□□□□ 0.62
TOM1-218ENST00000608674 ROCK2O75116 1388 aaKnown RBP18.92■□□□□ 0.62
TOM1-218ENST00000608674 ATAD2Q6PL18 1390 aa18.92■□□□□ 0.62
TOM1-218ENST00000608674 VPS72Q15906 364 aa18.9■□□□□ 0.62
TOM1-218ENST00000608674 CABP2Q9NPB3 220 aa18.9■□□□□ 0.62
TOM1-218ENST00000608674 POLR3AO14802 1390 aaPredicted RBP18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms