RNA–Protein interactions for RNA: ENST00000607482.5

CTSA-217, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 403 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-217ENST00000607482 ESCO1Q5FWF5 840 aa27.93■■■□□ 2.06
CTSA-217ENST00000607482 DDX17Q92841 729 aaKnown RBP27.93■■■□□ 2.06
CTSA-217ENST00000607482 STAC3Q96MF2 364 aa27.93■■■□□ 2.06
CTSA-217ENST00000607482 ORAI2Q96SN7 254 aa27.93■■■□□ 2.06
CTSA-217ENST00000607482 POGKQ9P215 609 aa27.92■■■□□ 2.06
CTSA-217ENST00000607482 TECPR2O15040 1411 aa27.92■■■□□ 2.06
CTSA-217ENST00000607482 NUTM2FA1L443 756 aa27.91■■■□□ 2.06
CTSA-217ENST00000607482 LAMC1P11047 1609 aa27.9■■■□□ 2.06
CTSA-217ENST00000607482 NRXN1Q9ULB1 1477 aa27.89■■■□□ 2.06
CTSA-217ENST00000607482 SAFB2Q14151 953 aaKnown RBP eCLIP27.89■■■□□ 2.06
CTSA-217ENST00000607482 SIRT1Q96EB6 747 aa27.88■■■□□ 2.05
CTSA-217ENST00000607482 PLEKHH1Q9ULM0 1364 aa27.87■■■□□ 2.05
CTSA-217ENST00000607482 PRAM1Q96QH2 718 aa27.87■■■□□ 2.05
CTSA-217ENST00000607482 RGS17Q9UGC6 210 aaPredicted RBP27.87■■■□□ 2.05
CTSA-217ENST00000607482 TRAK1Q9UPV9 953 aa27.84■■■□□ 2.05
CTSA-217ENST00000607482 CDC42BPGQ6DT37 1551 aa27.84■■■□□ 2.05
CTSA-217ENST00000607482 NHSL1Q5SYE7 1610 aa27.84■■■□□ 2.05
CTSA-217ENST00000607482 KNDC1Q76NI1 1749 aa27.84■■■□□ 2.05
CTSA-217ENST00000607482 SHPRHQ149N8 1683 aa27.83■■■□□ 2.05
CTSA-217ENST00000607482 NPHP3Q7Z494 1330 aa27.82■■■□□ 2.04
CTSA-217ENST00000607482 ZNF772Q68DY9 489 aaPredicted RBP27.8■■■□□ 2.04
CTSA-217ENST00000607482 FOXO3O43524 673 aa27.79■■■□□ 2.04
CTSA-217ENST00000607482 POTEAQ6S8J7 498 aa27.79■■■□□ 2.04
CTSA-217ENST00000607482 SOS2Q07890 1332 aaPredicted RBP27.77■■■□□ 2.04
CTSA-217ENST00000607482 LRP6O75581 1613 aa27.77■■■□□ 2.04
CTSA-217ENST00000607482 XPCQ01831 940 aaPredicted RBP27.76■■■□□ 2.03
CTSA-217ENST00000607482 PNPLA6Q8IY17 1366 aa27.75■■■□□ 2.03
CTSA-217ENST00000607482 ADAMTS2O95450 1211 aa27.74■■■□□ 2.03
CTSA-217ENST00000607482 C8orf37Q96NL8 207 aa27.74■■■□□ 2.03
CTSA-217ENST00000607482 HIRIP3Q9BW71 556 aaPredicted RBP27.72■■■□□ 2.03
CTSA-217ENST00000607482 DLC1Q96QB1 1528 aa27.72■■■□□ 2.03
CTSA-217ENST00000607482 MINK1Q8N4C8 1332 aaPredicted RBP27.71■■■□□ 2.03
CTSA-217ENST00000607482 NEUROD1Q13562 356 aa27.71■■■□□ 2.03
CTSA-217ENST00000607482 NGLY1Q96IV0 654 aa27.7■■■□□ 2.02
CTSA-217ENST00000607482 PHF8Q9UPP1 1060 aa27.7■■■□□ 2.02
CTSA-217ENST00000607482 ADGRB1O14514 1584 aa27.69■■■□□ 2.02
CTSA-217ENST00000607482 AFF2P51816 1311 aa27.68■■■□□ 2.02
CTSA-217ENST00000607482 FMN2Q9NZ56 1722 aa27.68■■■□□ 2.02
CTSA-217ENST00000607482 PSME1Q06323 249 aa27.68■■■□□ 2.02
CTSA-217ENST00000607482 KRT28Q7Z3Y7 464 aa27.66■■■□□ 2.02
CTSA-217ENST00000607482 EIF3AQ14152 1382 aaKnown RBP27.65■■■□□ 2.02
CTSA-217ENST00000607482 RXRBP28702 533 aa27.64■■■□□ 2.02
CTSA-217ENST00000607482 TRIM26Q12899 539 aaPredicted RBP27.64■■■□□ 2.02
CTSA-217ENST00000607482 LMOD2Q6P5Q4 547 aa27.64■■■□□ 2.02
CTSA-217ENST00000607482 HAP1P54257 671 aaPredicted RBP27.63■■■□□ 2.01
CTSA-217ENST00000607482 SIN3AQ96ST3 1273 aa27.63■■■□□ 2.01
CTSA-217ENST00000607482 PMFBP1Q8TBY8 1022 aa27.62■■■□□ 2.01
CTSA-217ENST00000607482 PXDNQ92626 1479 aa27.62■■■□□ 2.01
CTSA-217ENST00000607482 KIF1AQ12756 1690 aa27.62■■■□□ 2.01
CTSA-217ENST00000607482 WASLO00401 505 aaPredicted RBP27.61■■■□□ 2.01
CTSA-217ENST00000607482 L3MBTL2Q969R5 705 aa27.6■■■□□ 2.01
CTSA-217ENST00000607482 PLEKHG5O94827 1062 aa27.59■■■□□ 2.01
CTSA-217ENST00000607482 ANKARQ7Z5J8 1434 aa27.58■■■□□ 2.01
CTSA-217ENST00000607482 QTRT2Q9H974 415 aaKnown RBP27.58■■■□□ 2.01
CTSA-217ENST00000607482 NBPF1Q3BBV0 1214 aa27.57■■■□□ 2
CTSA-217ENST00000607482 SPATA31A3Q5VYP0 1347 aa27.57■■■□□ 2
CTSA-217ENST00000607482 NGDNQ8NEJ9 315 aaKnown RBP27.56■■■□□ 2
CTSA-217ENST00000607482 USP21Q9UK80 565 aa27.55■■■□□ 2
CTSA-217ENST00000607482 GPRASP1Q5JY77 1395 aa27.55■■■□□ 2
CTSA-217ENST00000607482 RGPD8O14715 1765 aaPredicted RBP27.55■■■□□ 2
CTSA-217ENST00000607482 ADGRB2O60241 1585 aa27.54■■■□□ 2
CTSA-217ENST00000607482 KIAA1210Q9ULL0 1709 aa27.53■■■□□ 2
CTSA-217ENST00000607482 CDK19Q9BWU1 502 aa27.51■■□□□ 1.99
CTSA-217ENST00000607482 COL22A1Q8NFW1 1626 aaPredicted RBP27.51■■□□□ 1.99
CTSA-217ENST00000607482 RBM6P78332 1123 aaKnown RBP27.5■■□□□ 1.99
CTSA-217ENST00000607482 ARHGEF28Q8N1W1 1705 aaKnown RBP27.5■■□□□ 1.99
CTSA-217ENST00000607482 TNS3Q68CZ2 1445 aa27.5■■□□□ 1.99
CTSA-217ENST00000607482 PAK3O75914 559 aaPredicted RBP27.49■■□□□ 1.99
CTSA-217ENST00000607482 NUDT16Q96DE0 195 aaKnown RBP27.49■■□□□ 1.99
CTSA-217ENST00000607482 TULP4Q9NRJ4 1543 aa27.49■■□□□ 1.99
CTSA-217ENST00000607482 ARHGEF10O15013 1369 aa27.48■■□□□ 1.99
CTSA-217ENST00000607482 TRPC5Q9UL62 973 aaPredicted RBP27.48■■□□□ 1.99
CTSA-217ENST00000607482 SBNO1A3KN83 1393 aa27.48■■□□□ 1.99
CTSA-217ENST00000607482 PRR36Q9H6K5 1346 aa27.47■■□□□ 1.99
CTSA-217ENST00000607482 CENPJQ9HC77 1338 aaPredicted RBP27.47■■□□□ 1.99
CTSA-217ENST00000607482 SRPK2P78362 688 aaKnown RBP27.46■■□□□ 1.99
CTSA-217ENST00000607482 FNBP4Q8N3X1 1017 aaPredicted RBP27.46■■□□□ 1.99
CTSA-217ENST00000607482 CABLES1Q8TDN4 633 aa27.45■■□□□ 1.98
CTSA-217ENST00000607482 USP32Q8NFA0 1604 aa27.45■■□□□ 1.98
CTSA-217ENST00000607482 ROCK2O75116 1388 aaKnown RBP27.44■■□□□ 1.98
CTSA-217ENST00000607482 TONSLQ96HA7 1378 aa27.43■■□□□ 1.98
CTSA-217ENST00000607482 CCDC61Q9Y6R9 512 aa27.41■■□□□ 1.98
CTSA-217ENST00000607482 CDK12Q9NYV4 1490 aaPredicted RBP27.38■■□□□ 1.97
CTSA-217ENST00000607482 ITSN1Q15811 1721 aa27.36■■□□□ 1.97
CTSA-217ENST00000607482 ATP7BP35670 1465 aa27.36■■□□□ 1.97
CTSA-217ENST00000607482 UNC5CLQ8IV45 518 aa27.35■■□□□ 1.97
CTSA-217ENST00000607482 CABP2Q9NPB3 220 aa27.35■■□□□ 1.97
CTSA-217ENST00000607482 CCDC9Q9Y3X0 531 aaKnown RBP27.34■■□□□ 1.97
CTSA-217ENST00000607482 ACEP12821 1306 aa27.34■■□□□ 1.97
CTSA-217ENST00000607482 MARF1Q9Y4F3 1742 aaKnown RBP27.33■■□□□ 1.97
CTSA-217ENST00000607482 EVC2Q86UK5 1308 aa27.33■■□□□ 1.97
CTSA-217ENST00000607482 NBPF8Q3BBV2 869 aa27.32■■□□□ 1.96
CTSA-217ENST00000607482 TRPM1Q7Z4N2 1603 aa27.31■■□□□ 1.96
CTSA-217ENST00000607482 GJD4Q96KN9 370 aaPredicted RBP27.31■■□□□ 1.96
CTSA-217ENST00000607482 ATRNO75882 1429 aa27.31■■□□□ 1.96
CTSA-217ENST00000607482 BCL9LQ86UU0 1499 aa27.31■■□□□ 1.96
CTSA-217ENST00000607482 PLEKHG3A1L390 1219 aa27.3■■□□□ 1.96
CTSA-217ENST00000607482 CARD11Q9BXL7 1154 aa27.3■■□□□ 1.96
CTSA-217ENST00000607482 RGS12O14924 1447 aa27.3■■□□□ 1.96
CTSA-217ENST00000607482 QRICH2Q9H0J4 1663 aa27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms