RNA–Protein interactions for RNA: ENST00000607045.5

TMEM248-207, Transcript of transmembrane protein 248, humanhuman

TSL 3

Gene TMEM248, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-207ENST00000607045 ESCO1Q5FWF5 840 aa32.46■■■□□ 2.79
TMEM248-207ENST00000607045 QTRT2Q9H974 415 aaKnown RBP32.45■■■□□ 2.79
TMEM248-207ENST00000607045 NUTM2FA1L443 756 aa32.44■■■□□ 2.78
TMEM248-207ENST00000607045 UPF1Q92900 1129 aaKnown RBP eCLIP32.42■■■□□ 2.78
TMEM248-207ENST00000607045 NGLY1Q96IV0 654 aa32.42■■■□□ 2.78
TMEM248-207ENST00000607045 LRPPRCP42704 1394 aaKnown RBP32.42■■■□□ 2.78
TMEM248-207ENST00000607045 PLEKHH1Q9ULM0 1364 aa32.41■■■□□ 2.78
TMEM248-207ENST00000607045 ABCC11Q96J66 1382 aa32.4■■■□□ 2.78
TMEM248-207ENST00000607045 FOXO3O43524 673 aa32.39■■■□□ 2.78
TMEM248-207ENST00000607045 XPCQ01831 940 aaPredicted RBP32.38■■■□□ 2.77
TMEM248-207ENST00000607045 C14orf93Q9H972 538 aaKnown RBP32.37■■■□□ 2.77
TMEM248-207ENST00000607045 PIK3C2GO75747 1445 aa32.36■■■□□ 2.77
TMEM248-207ENST00000607045 TECPR2O15040 1411 aa32.35■■■□□ 2.77
TMEM248-207ENST00000607045 ACIN1Q9UKV3 1341 aaKnown RBP32.35■■■□□ 2.77
TMEM248-207ENST00000607045 CFAP70Q5T0N1 1121 aa32.35■■■□□ 2.77
TMEM248-207ENST00000607045 LAMC1P11047 1609 aa32.34■■■□□ 2.77
TMEM248-207ENST00000607045 RBM6P78332 1123 aaKnown RBP32.34■■■□□ 2.77
TMEM248-207ENST00000607045 NPHP3Q7Z494 1330 aa32.33■■■□□ 2.77
TMEM248-207ENST00000607045 RAB3GAP2Q9H2M9 1393 aa32.32■■■□□ 2.77
TMEM248-207ENST00000607045 YTHDC2Q9H6S0 1430 aaKnown RBP32.32■■■□□ 2.76
TMEM248-207ENST00000607045 SIRT1Q96EB6 747 aa32.3■■■□□ 2.76
TMEM248-207ENST00000607045 IFT172Q9UG01 1749 aa32.3■■■□□ 2.76
TMEM248-207ENST00000607045 USP21Q9UK80 565 aa32.29■■■□□ 2.76
TMEM248-207ENST00000607045 CDC42BPGQ6DT37 1551 aa32.28■■■□□ 2.76
TMEM248-207ENST00000607045 CDK12Q9NYV4 1490 aaPredicted RBP32.28■■■□□ 2.76
TMEM248-207ENST00000607045 FNBP4Q8N3X1 1017 aaPredicted RBP32.27■■■□□ 2.76
TMEM248-207ENST00000607045 PXDNQ92626 1479 aa32.24■■■□□ 2.75
TMEM248-207ENST00000607045 DHX57Q6P158 1386 aaKnown RBP32.23■■■□□ 2.75
TMEM248-207ENST00000607045 SAFB2Q14151 953 aaKnown RBP eCLIP32.23■■■□□ 2.75
TMEM248-207ENST00000607045 RGS12O14924 1447 aa32.21■■■□□ 2.75
TMEM248-207ENST00000607045 NRXN1Q9ULB1 1477 aa32.21■■■□□ 2.75
TMEM248-207ENST00000607045 PRAM1Q96QH2 718 aa32.2■■■□□ 2.75
TMEM248-207ENST00000607045 TRPC5Q9UL62 973 aaPredicted RBP32.2■■■□□ 2.75
TMEM248-207ENST00000607045 KRT28Q7Z3Y7 464 aa32.19■■■□□ 2.74
TMEM248-207ENST00000607045 MYOM2P54296 1465 aa32.18■■■□□ 2.74
TMEM248-207ENST00000607045 KDM2AQ9Y2K7 1162 aa32.18■■■□□ 2.74
TMEM248-207ENST00000607045 KNDC1Q76NI1 1749 aa32.15■■■□□ 2.74
TMEM248-207ENST00000607045 PHF8Q9UPP1 1060 aa32.15■■■□□ 2.74
TMEM248-207ENST00000607045 SPATA31A3Q5VYP0 1347 aa32.15■■■□□ 2.74
TMEM248-207ENST00000607045 COL22A1Q8NFW1 1626 aaPredicted RBP32.15■■■□□ 2.74
TMEM248-207ENST00000607045 POGKQ9P215 609 aa32.14■■■□□ 2.74
TMEM248-207ENST00000607045 DCAF11Q8TEB1 546 aa32.12■■■□□ 2.73
TMEM248-207ENST00000607045 TRAK1Q9UPV9 953 aa32.11■■■□□ 2.73
TMEM248-207ENST00000607045 BCL9LQ86UU0 1499 aa32.1■■■□□ 2.73
TMEM248-207ENST00000607045 ATRNO75882 1429 aa32.1■■■□□ 2.73
TMEM248-207ENST00000607045 FMN2Q9NZ56 1722 aa32.1■■■□□ 2.73
TMEM248-207ENST00000607045 PLEKHG5O94827 1062 aa32.08■■■□□ 2.73
TMEM248-207ENST00000607045 HRCP23327 699 aa32.07■■■□□ 2.72
TMEM248-207ENST00000607045 PMFBP1Q8TBY8 1022 aa32.07■■■□□ 2.72
TMEM248-207ENST00000607045 PSME1Q06323 249 aa32.06■■■□□ 2.72
TMEM248-207ENST00000607045 CABLES1Q8TDN4 633 aa32.06■■■□□ 2.72
TMEM248-207ENST00000607045 HIRIP3Q9BW71 556 aaPredicted RBP32.06■■■□□ 2.72
TMEM248-207ENST00000607045 GJD4Q96KN9 370 aaPredicted RBP32.04■■■□□ 2.72
TMEM248-207ENST00000607045 LMOD2Q6P5Q4 547 aa32.02■■■□□ 2.72
TMEM248-207ENST00000607045 UNC5CLQ8IV45 518 aa32.01■■■□□ 2.71
TMEM248-207ENST00000607045 RGPD8O14715 1765 aaPredicted RBP32.01■■■□□ 2.71
TMEM248-207ENST00000607045 MINK1Q8N4C8 1332 aaPredicted RBP32■■■□□ 2.71
TMEM248-207ENST00000607045 ADGRB1O14514 1584 aa32■■■□□ 2.71
TMEM248-207ENST00000607045 EP400Q96L91 3159 aa31.99■■■□□ 2.71
TMEM248-207ENST00000607045 DLC1Q96QB1 1528 aa31.98■■■□□ 2.71
TMEM248-207ENST00000607045 ATAD2Q6PL18 1390 aa31.97■■■□□ 2.71
TMEM248-207ENST00000607045 KIF1AQ12756 1690 aa31.97■■■□□ 2.71
TMEM248-207ENST00000607045 HAP1P54257 671 aaPredicted RBP31.97■■■□□ 2.71
TMEM248-207ENST00000607045 SRCAPQ6ZRS2 3230 aa31.96■■■□□ 2.71
TMEM248-207ENST00000607045 SBNO1A3KN83 1393 aa31.95■■■□□ 2.71
TMEM248-207ENST00000607045 TNS3Q68CZ2 1445 aa31.95■■■□□ 2.71
TMEM248-207ENST00000607045 STAC3Q96MF2 364 aa31.95■■■□□ 2.71
TMEM248-207ENST00000607045 PRR36Q9H6K5 1346 aa31.95■■■□□ 2.7
TMEM248-207ENST00000607045 SLIT2O94813 1529 aa31.94■■■□□ 2.7
TMEM248-207ENST00000607045 WASLO00401 505 aaPredicted RBP31.93■■■□□ 2.7
TMEM248-207ENST00000607045 MARF1Q9Y4F3 1742 aaKnown RBP31.92■■■□□ 2.7
TMEM248-207ENST00000607045 ANKARQ7Z5J8 1434 aa31.91■■■□□ 2.7
TMEM248-207ENST00000607045 FAM83GA6ND36 823 aa31.89■■■□□ 2.7
TMEM248-207ENST00000607045 USP32Q8NFA0 1604 aa31.89■■■□□ 2.7
TMEM248-207ENST00000607045 RALGAPBQ86X10 1494 aa31.87■■■□□ 2.69
TMEM248-207ENST00000607045 ARHGEF10O15013 1369 aa31.86■■■□□ 2.69
TMEM248-207ENST00000607045 VPS72Q15906 364 aa31.84■■■□□ 2.69
TMEM248-207ENST00000607045 NGDNQ8NEJ9 315 aaKnown RBP31.83■■■□□ 2.69
TMEM248-207ENST00000607045 ADGRB2O60241 1585 aa31.82■■■□□ 2.68
TMEM248-207ENST00000607045 GPRASP1Q5JY77 1395 aa31.81■■■□□ 2.68
TMEM248-207ENST00000607045 GLI3P10071 1580 aa31.81■■■□□ 2.68
TMEM248-207ENST00000607045 SEPT12Q8IYM1 358 aa31.81■■■□□ 2.68
TMEM248-207ENST00000607045 CCDC9Q9Y3X0 531 aaKnown RBP31.81■■■□□ 2.68
TMEM248-207ENST00000607045 NUDT16Q96DE0 195 aaKnown RBP31.8■■■□□ 2.68
TMEM248-207ENST00000607045 CCDC125Q86Z20 511 aa31.79■■■□□ 2.68
TMEM248-207ENST00000607045 ONECUT3O60422 494 aaPredicted RBP31.78■■■□□ 2.68
TMEM248-207ENST00000607045 PAK3O75914 559 aaPredicted RBP31.78■■■□□ 2.68
TMEM248-207ENST00000607045 NBPF1Q3BBV0 1214 aa31.78■■■□□ 2.68
TMEM248-207ENST00000607045 CDK19Q9BWU1 502 aa31.78■■■□□ 2.68
TMEM248-207ENST00000607045 EIF3AQ14152 1382 aaKnown RBP31.78■■■□□ 2.68
TMEM248-207ENST00000607045 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.77■■■□□ 2.68
TMEM248-207ENST00000607045 TULP4Q9NRJ4 1543 aa31.76■■■□□ 2.68
TMEM248-207ENST00000607045 BTG4Q9NY30 223 aa31.75■■■□□ 2.67
TMEM248-207ENST00000607045 TRPM3Q9HCF6 1732 aaPredicted RBP31.71■■■□□ 2.67
TMEM248-207ENST00000607045 ZRANB1Q9UGI0 708 aa31.68■■■□□ 2.66
TMEM248-207ENST00000607045 FAM98CQ17RN3 349 aaKnown RBP31.67■■■□□ 2.66
TMEM248-207ENST00000607045 KRT27Q7Z3Y8 459 aa31.67■■■□□ 2.66
TMEM248-207ENST00000607045 ABCA3Q99758 1704 aa31.66■■■□□ 2.66
TMEM248-207ENST00000607045 NUTM2GQ5VZR2 741 aa31.66■■■□□ 2.66
TMEM248-207ENST00000607045 DEFB132Q7Z7B7 95 aa31.66■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms