RNA–Protein interactions for RNA: ENST00000606394.5

CTSA-212, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-212ENST00000606394 MYOM2P54296 1465 aa20.34■□□□□ 0.85
CTSA-212ENST00000606394 KIF1BO60333 1816 aa20.34■□□□□ 0.85
CTSA-212ENST00000606394 NPHP3Q7Z494 1330 aa20.33■□□□□ 0.85
CTSA-212ENST00000606394 BCL9LQ86UU0 1499 aa20.31■□□□□ 0.84
CTSA-212ENST00000606394 ITGAEP38570 1179 aa20.31■□□□□ 0.84
CTSA-212ENST00000606394 RPGRIP1LQ68CZ1 1315 aa20.3■□□□□ 0.84
CTSA-212ENST00000606394 GJD4Q96KN9 370 aaPredicted RBP20.28■□□□□ 0.84
CTSA-212ENST00000606394 CDC42BPGQ6DT37 1551 aa20.28■□□□□ 0.84
CTSA-212ENST00000606394 MARF1Q9Y4F3 1742 aaKnown RBP20.27■□□□□ 0.84
CTSA-212ENST00000606394 PXDNQ92626 1479 aa20.27■□□□□ 0.84
CTSA-212ENST00000606394 LRPPRCP42704 1394 aaKnown RBP20.27■□□□□ 0.84
CTSA-212ENST00000606394 ESCO1Q5FWF5 840 aa20.26■□□□□ 0.83
CTSA-212ENST00000606394 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.25■□□□□ 0.83
CTSA-212ENST00000606394 BLMP54132 1417 aaPredicted RBP20.23■□□□□ 0.83
CTSA-212ENST00000606394 FOXO3O43524 673 aa20.21■□□□□ 0.83
CTSA-212ENST00000606394 UNC5CLQ8IV45 518 aa20.21■□□□□ 0.83
CTSA-212ENST00000606394 PPLO60437 1756 aa20.19■□□□□ 0.82
CTSA-212ENST00000606394 SLIT2O94813 1529 aa20.19■□□□□ 0.82
CTSA-212ENST00000606394 TECPR2O15040 1411 aa20.19■□□□□ 0.82
CTSA-212ENST00000606394 RALGAPBQ86X10 1494 aa20.18■□□□□ 0.82
CTSA-212ENST00000606394 NAIPQ13075 1403 aa20.18■□□□□ 0.82
CTSA-212ENST00000606394 GLI3P10071 1580 aa20.17■□□□□ 0.82
CTSA-212ENST00000606394 XPCQ01831 940 aaPredicted RBP20.16■□□□□ 0.82
CTSA-212ENST00000606394 SF3B2Q13435 895 aaKnown RBP20.15■□□□□ 0.82
CTSA-212ENST00000606394 SPATA31A3Q5VYP0 1347 aa20.15■□□□□ 0.82
CTSA-212ENST00000606394 CCDC144AA2RUR9 1427 aa20.14■□□□□ 0.81
CTSA-212ENST00000606394 KIF1AQ12756 1690 aa20.13■□□□□ 0.81
CTSA-212ENST00000606394 ABCC11Q96J66 1382 aa20.12■□□□□ 0.81
CTSA-212ENST00000606394 USP32Q8NFA0 1604 aa20.12■□□□□ 0.81
CTSA-212ENST00000606394 ONECUT3O60422 494 aaPredicted RBP20.11■□□□□ 0.81
CTSA-212ENST00000606394 VPS72Q15906 364 aa20.11■□□□□ 0.81
CTSA-212ENST00000606394 LRP5O75197 1615 aa20.11■□□□□ 0.81
CTSA-212ENST00000606394 RRBP1Q9P2E9 1410 aaKnown RBP20.1■□□□□ 0.81
CTSA-212ENST00000606394 DEFB132Q7Z7B7 95 aa20.1■□□□□ 0.81
CTSA-212ENST00000606394 SEPT12Q8IYM1 358 aa20.1■□□□□ 0.81
CTSA-212ENST00000606394 SLC4A1APQ9BWU0 796 aaKnown RBP20.1■□□□□ 0.81
CTSA-212ENST00000606394 BRWD3Q6RI45 1802 aa20.09■□□□□ 0.81
CTSA-212ENST00000606394 WAPLQ7Z5K2 1190 aa20.09■□□□□ 0.81
CTSA-212ENST00000606394 KNDC1Q76NI1 1749 aa20.09■□□□□ 0.81
CTSA-212ENST00000606394 ANKRD30BQ9BXX2 1392 aa20.08■□□□□ 0.81
CTSA-212ENST00000606394 FMN2Q9NZ56 1722 aa20.08■□□□□ 0.81
CTSA-212ENST00000606394 NUTM2FA1L443 756 aa20.08■□□□□ 0.81
CTSA-212ENST00000606394 KRT28Q7Z3Y7 464 aa20.08■□□□□ 0.81
CTSA-212ENST00000606394 NWD2Q9ULI1 1742 aa20.07■□□□□ 0.8
CTSA-212ENST00000606394 ADGRF5Q8IZF2 1346 aa20.07■□□□□ 0.8
CTSA-212ENST00000606394 PSME1Q06323 249 aa20.07■□□□□ 0.8
CTSA-212ENST00000606394 STK26Q9P289 416 aa20.07■□□□□ 0.8
CTSA-212ENST00000606394 HAP1P54257 671 aaPredicted RBP20.06■□□□□ 0.8
CTSA-212ENST00000606394 TNS3Q68CZ2 1445 aa20.06■□□□□ 0.8
CTSA-212ENST00000606394 SIRT1Q96EB6 747 aa20.06■□□□□ 0.8
CTSA-212ENST00000606394 KRT27Q7Z3Y8 459 aa20.05■□□□□ 0.8
CTSA-212ENST00000606394 SBNO1A3KN83 1393 aa20.04■□□□□ 0.8
CTSA-212ENST00000606394 PLEKHH1Q9ULM0 1364 aa20.04■□□□□ 0.8
CTSA-212ENST00000606394 SPATA31E1Q6ZUB1 1445 aa20.03■□□□□ 0.8
CTSA-212ENST00000606394 ARHGEF10O15013 1369 aa20.03■□□□□ 0.8
CTSA-212ENST00000606394 PIK3C2GO75747 1445 aa20.02■□□□□ 0.8
CTSA-212ENST00000606394 PHF8Q9UPP1 1060 aa20.02■□□□□ 0.8
CTSA-212ENST00000606394 PLCH1Q4KWH8 1693 aa20.02■□□□□ 0.8
CTSA-212ENST00000606394 YTHDC2Q9H6S0 1430 aaKnown RBP20.02■□□□□ 0.79
CTSA-212ENST00000606394 BAG6P46379 1132 aa20.01■□□□□ 0.79
CTSA-212ENST00000606394 PPARGC1BQ86YN6 1023 aaKnown RBP20.01■□□□□ 0.79
CTSA-212ENST00000606394 IFT172Q9UG01 1749 aa20.01■□□□□ 0.79
CTSA-212ENST00000606394 TMEM132EQ6IEE7 984 aa20■□□□□ 0.79
CTSA-212ENST00000606394 CCDC9Q9Y3X0 531 aaKnown RBP20■□□□□ 0.79
CTSA-212ENST00000606394 NRXN1Q9ULB1 1477 aa19.99■□□□□ 0.79
CTSA-212ENST00000606394 HRCP23327 699 aa19.98■□□□□ 0.79
CTSA-212ENST00000606394 RGL3Q3MIN7 710 aa19.98■□□□□ 0.79
CTSA-212ENST00000606394 CABLES1Q8TDN4 633 aa19.98■□□□□ 0.79
CTSA-212ENST00000606394 ABCA3Q99758 1704 aa19.97■□□□□ 0.79
CTSA-212ENST00000606394 FAM83GA6ND36 823 aa19.95■□□□□ 0.78
CTSA-212ENST00000606394 RGPD8O14715 1765 aaPredicted RBP19.95■□□□□ 0.78
CTSA-212ENST00000606394 C14orf93Q9H972 538 aaKnown RBP19.94■□□□□ 0.78
CTSA-212ENST00000606394 ANKARQ7Z5J8 1434 aa19.93■□□□□ 0.78
CTSA-212ENST00000606394 A0A0G2JS52 829 aa19.93■□□□□ 0.78
CTSA-212ENST00000606394 PSDA5PKW4 1024 aaPredicted RBP19.93■□□□□ 0.78
CTSA-212ENST00000606394 MYT1Q01538 1121 aa19.93■□□□□ 0.78
CTSA-212ENST00000606394 LMOD2Q6P5Q4 547 aa19.93■□□□□ 0.78
CTSA-212ENST00000606394 DHX57Q6P158 1386 aaKnown RBP19.93■□□□□ 0.78
CTSA-212ENST00000606394 NRAPQ86VF7 1730 aa19.92■□□□□ 0.78
CTSA-212ENST00000606394 DISP2A7MBM2 1401 aa19.92■□□□□ 0.78
CTSA-212ENST00000606394 RGPD1P0DJD0 1748 aa19.91■□□□□ 0.78
CTSA-212ENST00000606394 FAM98CQ17RN3 349 aaKnown RBP19.91■□□□□ 0.78
CTSA-212ENST00000606394 BTG4Q9NY30 223 aa19.9■□□□□ 0.78
CTSA-212ENST00000606394 COL14A1Q05707 1796 aaKnown RBP19.9■□□□□ 0.78
CTSA-212ENST00000606394 PLEKHG5O94827 1062 aa19.88■□□□□ 0.77
CTSA-212ENST00000606394 PRAM1Q96QH2 718 aa19.88■□□□□ 0.77
CTSA-212ENST00000606394 MPHOSPH9Q99550 1183 aa19.88■□□□□ 0.77
CTSA-212ENST00000606394 DLC1Q96QB1 1528 aa19.87■□□□□ 0.77
CTSA-212ENST00000606394 SPATA31A5Q5VU36 1347 aa19.87■□□□□ 0.77
CTSA-212ENST00000606394 SPATA31A7Q8IWB4 1347 aa19.87■□□□□ 0.77
CTSA-212ENST00000606394 EN1Q05925 392 aaPredicted RBP19.87■□□□□ 0.77
CTSA-212ENST00000606394 ADGRB2O60241 1585 aa19.87■□□□□ 0.77
CTSA-212ENST00000606394 GPRASP1Q5JY77 1395 aa19.86■□□□□ 0.77
CTSA-212ENST00000606394 TRPM3Q9HCF6 1732 aaPredicted RBP19.85■□□□□ 0.77
CTSA-212ENST00000606394 EIF3AQ14152 1382 aaKnown RBP19.85■□□□□ 0.77
CTSA-212ENST00000606394 ACIN1Q9UKV3 1341 aaKnown RBP19.85■□□□□ 0.77
CTSA-212ENST00000606394 CFAP70Q5T0N1 1121 aa19.85■□□□□ 0.77
CTSA-212ENST00000606394 PMFBP1Q8TBY8 1022 aa19.85■□□□□ 0.77
CTSA-212ENST00000606394 ALS2Q96Q42 1657 aa19.84■□□□□ 0.77
CTSA-212ENST00000606394 POGKQ9P215 609 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms