RNA–Protein interactions for RNA: ENST00000606127.2

LHX9-207, Transcript of LIM homeobox 9, humanhuman

TSL 3

Gene LHX9, Length 431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX9-207ENST00000606127 ATAD2Q6PL18 1390 aa14.37□□□□□ -0.11
LHX9-207ENST00000606127 ZNF326Q5BKZ1 582 aaKnown RBP14.37□□□□□ -0.11
LHX9-207ENST00000606127 NGLY1Q96IV0 654 aa14.37□□□□□ -0.11
LHX9-207ENST00000606127 IFT172Q9UG01 1749 aa14.37□□□□□ -0.11
LHX9-207ENST00000606127 USP21Q9UK80 565 aa14.36□□□□□ -0.11
LHX9-207ENST00000606127 NAIPQ13075 1403 aa14.35□□□□□ -0.11
LHX9-207ENST00000606127 KNDC1Q76NI1 1749 aa14.35□□□□□ -0.11
LHX9-207ENST00000606127 ITGAEP38570 1179 aa14.34□□□□□ -0.11
LHX9-207ENST00000606127 TRPC5Q9UL62 973 aaPredicted RBP14.34□□□□□ -0.11
LHX9-207ENST00000606127 FMN2Q9NZ56 1722 aa14.34□□□□□ -0.11
LHX9-207ENST00000606127 RGPD8O14715 1765 aaPredicted RBP14.34□□□□□ -0.11
LHX9-207ENST00000606127 HFM1A2PYH4 1435 aa14.33□□□□□ -0.11
LHX9-207ENST00000606127 ABCA3Q99758 1704 aa14.33□□□□□ -0.12
LHX9-207ENST00000606127 SLIT2O94813 1529 aa14.32□□□□□ -0.12
LHX9-207ENST00000606127 USP32Q8NFA0 1604 aa14.31□□□□□ -0.12
LHX9-207ENST00000606127 TECPR2O15040 1411 aa14.31□□□□□ -0.12
LHX9-207ENST00000606127 PLCH1Q4KWH8 1693 aa14.3□□□□□ -0.12
LHX9-207ENST00000606127 RRBP1Q9P2E9 1410 aaKnown RBP14.3□□□□□ -0.12
LHX9-207ENST00000606127 RALGAPBQ86X10 1494 aa14.3□□□□□ -0.12
LHX9-207ENST00000606127 TRIM26Q12899 539 aaPredicted RBP14.29□□□□□ -0.12
LHX9-207ENST00000606127 LRP5O75197 1615 aa14.28□□□□□ -0.12
LHX9-207ENST00000606127 XPCQ01831 940 aaPredicted RBP14.28□□□□□ -0.12
LHX9-207ENST00000606127 PPARGC1BQ86YN6 1023 aaKnown RBP14.28□□□□□ -0.12
LHX9-207ENST00000606127 PLEKHH1Q9ULM0 1364 aa14.28□□□□□ -0.12
LHX9-207ENST00000606127 KIF1AQ12756 1690 aa14.27□□□□□ -0.12
LHX9-207ENST00000606127 PCGF6Q9BYE7 350 aa14.27□□□□□ -0.13
LHX9-207ENST00000606127 NPHP3Q7Z494 1330 aa14.26□□□□□ -0.13
LHX9-207ENST00000606127 GJD4Q96KN9 370 aaPredicted RBP14.26□□□□□ -0.13
LHX9-207ENST00000606127 NRAPQ86VF7 1730 aa14.26□□□□□ -0.13
LHX9-207ENST00000606127 NWD2Q9ULI1 1742 aa14.26□□□□□ -0.13
LHX9-207ENST00000606127 SPATA31E1Q6ZUB1 1445 aa14.25□□□□□ -0.13
LHX9-207ENST00000606127 RPGRIP1LQ68CZ1 1315 aa14.25□□□□□ -0.13
LHX9-207ENST00000606127 ADGRF5Q8IZF2 1346 aa14.25□□□□□ -0.13
LHX9-207ENST00000606127 VGFO15240 615 aaPredicted RBP14.25□□□□□ -0.13
LHX9-207ENST00000606127 FOXO3O43524 673 aa14.24□□□□□ -0.13
LHX9-207ENST00000606127 ZRANB1Q9UGI0 708 aa14.24□□□□□ -0.13
LHX9-207ENST00000606127 BLMP54132 1417 aaPredicted RBP14.24□□□□□ -0.13
LHX9-207ENST00000606127 ESCO1Q5FWF5 840 aa14.23□□□□□ -0.13
LHX9-207ENST00000606127 WAPLQ7Z5K2 1190 aa14.23□□□□□ -0.13
LHX9-207ENST00000606127 LRPPRCP42704 1394 aaKnown RBP14.22□□□□□ -0.13
LHX9-207ENST00000606127 SPATA31A3Q5VYP0 1347 aa14.22□□□□□ -0.13
LHX9-207ENST00000606127 CCDC125Q86Z20 511 aa14.22□□□□□ -0.13
LHX9-207ENST00000606127 TRPM3Q9HCF6 1732 aaPredicted RBP14.21□□□□□ -0.13
LHX9-207ENST00000606127 CRYBG1Q9Y4K1 1723 aa14.21□□□□□ -0.13
LHX9-207ENST00000606127 NUTM2FA1L443 756 aa14.21□□□□□ -0.13
LHX9-207ENST00000606127 DEFB132Q7Z7B7 95 aa14.21□□□□□ -0.13
LHX9-207ENST00000606127 UNC5CLQ8IV45 518 aa14.21□□□□□ -0.13
LHX9-207ENST00000606127 PIK3C2GO75747 1445 aa14.21□□□□□ -0.13
LHX9-207ENST00000606127 ABCC11Q96J66 1382 aa14.21□□□□□ -0.14
LHX9-207ENST00000606127 FOXD1Q16676 465 aa14.19□□□□□ -0.14
LHX9-207ENST00000606127 CCDC144AA2RUR9 1427 aa14.18□□□□□ -0.14
LHX9-207ENST00000606127 TNS3Q68CZ2 1445 aa14.18□□□□□ -0.14
LHX9-207ENST00000606127 ALS2Q96Q42 1657 aa14.18□□□□□ -0.14
LHX9-207ENST00000606127 TNS1Q9HBL0 1735 aaKnown RBP14.18□□□□□ -0.14
LHX9-207ENST00000606127 YTHDC2Q9H6S0 1430 aaKnown RBP14.17□□□□□ -0.14
LHX9-207ENST00000606127 TMEM132EQ6IEE7 984 aa14.17□□□□□ -0.14
LHX9-207ENST00000606127 NRXN1Q9ULB1 1477 aa14.17□□□□□ -0.14
LHX9-207ENST00000606127 ONECUT3O60422 494 aaPredicted RBP14.16□□□□□ -0.14
LHX9-207ENST00000606127 SEPT12Q8IYM1 358 aa14.15□□□□□ -0.14
LHX9-207ENST00000606127 CABLES1Q8TDN4 633 aa14.15□□□□□ -0.14
LHX9-207ENST00000606127 SLC4A1APQ9BWU0 796 aaKnown RBP14.15□□□□□ -0.14
LHX9-207ENST00000606127 STK26Q9P289 416 aa14.15□□□□□ -0.14
LHX9-207ENST00000606127 THSD7AQ9UPZ6 1657 aa14.14□□□□□ -0.15
LHX9-207ENST00000606127 VPS72Q15906 364 aa14.14□□□□□ -0.15
LHX9-207ENST00000606127 RGPD1P0DJD0 1748 aa14.14□□□□□ -0.15
LHX9-207ENST00000606127 ADGRB2O60241 1585 aa14.13□□□□□ -0.15
LHX9-207ENST00000606127 KRT28Q7Z3Y7 464 aa14.13□□□□□ -0.15
LHX9-207ENST00000606127 SBNO1A3KN83 1393 aa14.12□□□□□ -0.15
LHX9-207ENST00000606127 ANKRD30BQ9BXX2 1392 aa14.12□□□□□ -0.15
LHX9-207ENST00000606127 COL14A1Q05707 1796 aaKnown RBP14.11□□□□□ -0.15
LHX9-207ENST00000606127 ADGRB1O14514 1584 aa14.1□□□□□ -0.15
LHX9-207ENST00000606127 FAM83GA6ND36 823 aa14.1□□□□□ -0.15
LHX9-207ENST00000606127 RGL3Q3MIN7 710 aa14.1□□□□□ -0.15
LHX9-207ENST00000606127 DLC1Q96QB1 1528 aa14.1□□□□□ -0.15
LHX9-207ENST00000606127 SIRT1Q96EB6 747 aa14.09□□□□□ -0.15
LHX9-207ENST00000606127 PHF8Q9UPP1 1060 aa14.09□□□□□ -0.15
LHX9-207ENST00000606127 HRCP23327 699 aa14.08□□□□□ -0.16
LHX9-207ENST00000606127 KRT27Q7Z3Y8 459 aa14.08□□□□□ -0.16
LHX9-207ENST00000606127 PSDA5PKW4 1024 aaPredicted RBP14.07□□□□□ -0.16
LHX9-207ENST00000606127 C14orf93Q9H972 538 aaKnown RBP14.07□□□□□ -0.16
LHX9-207ENST00000606127 RREB1Q92766 1687 aa14.07□□□□□ -0.16
LHX9-207ENST00000606127 DISP2A7MBM2 1401 aa14.07□□□□□ -0.16
LHX9-207ENST00000606127 PHRF1Q9P1Y6 1649 aaKnown RBP14.06□□□□□ -0.16
LHX9-207ENST00000606127 PRR36Q9H6K5 1346 aa14.06□□□□□ -0.16
LHX9-207ENST00000606127 ANKARQ7Z5J8 1434 aa14.06□□□□□ -0.16
LHX9-207ENST00000606127 NUP188Q5SRE5 1749 aa14.05□□□□□ -0.16
LHX9-207ENST00000606127 CFAP70Q5T0N1 1121 aa14.05□□□□□ -0.16
LHX9-207ENST00000606127 ARHGEF10O15013 1369 aa14.05□□□□□ -0.16
LHX9-207ENST00000606127 PLEKHG5O94827 1062 aa14.04□□□□□ -0.16
LHX9-207ENST00000606127 FAM182BQ5T319 152 aa14.04□□□□□ -0.16
LHX9-207ENST00000606127 MPHOSPH9Q99550 1183 aa14.04□□□□□ -0.16
LHX9-207ENST00000606127 FAM98CQ17RN3 349 aaKnown RBP14.03□□□□□ -0.16
LHX9-207ENST00000606127 ARHGEF28Q8N1W1 1705 aaKnown RBP14.02□□□□□ -0.16
LHX9-207ENST00000606127 TULP4Q9NRJ4 1543 aa14.02□□□□□ -0.16
LHX9-207ENST00000606127 EN1Q05925 392 aaPredicted RBP14.02□□□□□ -0.17
LHX9-207ENST00000606127 PMFBP1Q8TBY8 1022 aa14.02□□□□□ -0.17
LHX9-207ENST00000606127 PRAM1Q96QH2 718 aa14.02□□□□□ -0.17
LHX9-207ENST00000606127 SPATA31A5Q5VU36 1347 aa14.01□□□□□ -0.17
LHX9-207ENST00000606127 SPATA31A7Q8IWB4 1347 aa14.01□□□□□ -0.17
LHX9-207ENST00000606127 PSME1Q06323 249 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms