RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 ZNF772Q68DY9 489 aaPredicted RBP20.38■□□□□ 0.85
CTSA-211ENST00000606066 ADGRB1O14514 1584 aa20.37■□□□□ 0.85
CTSA-211ENST00000606066 TRAK1Q9UPV9 953 aa20.36■□□□□ 0.85
CTSA-211ENST00000606066 NBPF1Q3BBV0 1214 aa20.35■□□□□ 0.85
CTSA-211ENST00000606066 KIAA1210Q9ULL0 1709 aa20.34■□□□□ 0.85
CTSA-211ENST00000606066 NBPF8Q3BBV2 869 aa20.34■□□□□ 0.85
CTSA-211ENST00000606066 BRINP3Q76B58 766 aa20.34■□□□□ 0.85
CTSA-211ENST00000606066 WAPLQ7Z5K2 1190 aa20.34■□□□□ 0.85
CTSA-211ENST00000606066 POGKQ9P215 609 aa20.34■□□□□ 0.85
CTSA-211ENST00000606066 ROCK2O75116 1388 aaKnown RBP20.33■□□□□ 0.84
CTSA-211ENST00000606066 MEX3CQ5U5Q3 659 aaKnown RBP20.32■□□□□ 0.84
CTSA-211ENST00000606066 PRAM1Q96QH2 718 aa20.32■□□□□ 0.84
CTSA-211ENST00000606066 DLC1Q96QB1 1528 aa20.32■□□□□ 0.84
CTSA-211ENST00000606066 ADGRL3Q9HAR2 1447 aa20.31■□□□□ 0.84
CTSA-211ENST00000606066 DCCP43146 1447 aa20.3■□□□□ 0.84
CTSA-211ENST00000606066 KNDC1Q76NI1 1749 aa20.3■□□□□ 0.84
CTSA-211ENST00000606066 UPF1Q92900 1129 aaKnown RBP eCLIP20.29■□□□□ 0.84
CTSA-211ENST00000606066 RXRBP28702 533 aa20.28■□□□□ 0.84
CTSA-211ENST00000606066 PLEKHH1Q9ULM0 1364 aa20.28■□□□□ 0.84
CTSA-211ENST00000606066 LRP6O75581 1613 aa20.27■□□□□ 0.84
CTSA-211ENST00000606066 COL16A1Q07092 1604 aaPredicted RBP20.27■□□□□ 0.84
CTSA-211ENST00000606066 PHLPP1O60346 1717 aa20.27■□□□□ 0.83
CTSA-211ENST00000606066 SAFB2Q14151 953 aaKnown RBP eCLIP20.26■□□□□ 0.83
CTSA-211ENST00000606066 LRRC59Q96AG4 307 aaKnown RBP20.26■□□□□ 0.83
CTSA-211ENST00000606066 CARD11Q9BXL7 1154 aa20.26■□□□□ 0.83
CTSA-211ENST00000606066 AHDC1Q5TGY3 1603 aaPredicted RBP20.26■□□□□ 0.83
CTSA-211ENST00000606066 RALGAPBQ86X10 1494 aa20.25■□□□□ 0.83
CTSA-211ENST00000606066 GPRASP1Q5JY77 1395 aa20.25■□□□□ 0.83
CTSA-211ENST00000606066 TRPM1Q7Z4N2 1603 aa20.25■□□□□ 0.83
CTSA-211ENST00000606066 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.23■□□□□ 0.83
CTSA-211ENST00000606066 EIF3AQ14152 1382 aaKnown RBP20.22■□□□□ 0.83
CTSA-211ENST00000606066 NUTM2BA6NNL0 878 aaPredicted RBP20.21■□□□□ 0.83
CTSA-211ENST00000606066 NUTM2EB1AL46 878 aaPredicted RBP20.21■□□□□ 0.83
CTSA-211ENST00000606066 NUTM2AQ8IVF1 878 aaPredicted RBP20.21■□□□□ 0.83
CTSA-211ENST00000606066 CENPJQ9HC77 1338 aaPredicted RBP20.21■□□□□ 0.83
CTSA-211ENST00000606066 MINK1Q8N4C8 1332 aaPredicted RBP20.2■□□□□ 0.82
CTSA-211ENST00000606066 MST1RQ04912 1400 aa20.19■□□□□ 0.82
CTSA-211ENST00000606066 NALCNQ8IZF0 1738 aa20.19■□□□□ 0.82
CTSA-211ENST00000606066 CDC42BPGQ6DT37 1551 aa20.18■□□□□ 0.82
CTSA-211ENST00000606066 HIRIP3Q9BW71 556 aaPredicted RBP20.18■□□□□ 0.82
CTSA-211ENST00000606066 AFF2P51816 1311 aa20.18■□□□□ 0.82
CTSA-211ENST00000606066 CDK12Q9NYV4 1490 aaPredicted RBP20.18■□□□□ 0.82
CTSA-211ENST00000606066 WASLO00401 505 aaPredicted RBP20.16■□□□□ 0.82
CTSA-211ENST00000606066 C1orf167Q5SNV9 1468 aa20.16■□□□□ 0.82
CTSA-211ENST00000606066 ARHGEF28Q8N1W1 1705 aaKnown RBP20.16■□□□□ 0.82
CTSA-211ENST00000606066 QTRT2Q9H974 415 aaKnown RBP20.15■□□□□ 0.82
CTSA-211ENST00000606066 RBM6P78332 1123 aaKnown RBP20.14■□□□□ 0.81
CTSA-211ENST00000606066 NUTM2FA1L443 756 aa20.13■□□□□ 0.81
CTSA-211ENST00000606066 ESCO1Q5FWF5 840 aa20.13■□□□□ 0.81
CTSA-211ENST00000606066 SHPRHQ149N8 1683 aa20.13■□□□□ 0.81
CTSA-211ENST00000606066 ADGRB2O60241 1585 aa20.12■□□□□ 0.81
CTSA-211ENST00000606066 SRCAPQ6ZRS2 3230 aa20.12■□□□□ 0.81
CTSA-211ENST00000606066 SLC24A1O60721 1099 aa20.12■□□□□ 0.81
CTSA-211ENST00000606066 DDX17Q92841 729 aaKnown RBP20.12■□□□□ 0.81
CTSA-211ENST00000606066 PNPLA6Q8IY17 1366 aa20.11■□□□□ 0.81
CTSA-211ENST00000606066 C8orf37Q96NL8 207 aa20.11■□□□□ 0.81
CTSA-211ENST00000606066 CDK19Q9BWU1 502 aa20.11■□□□□ 0.81
CTSA-211ENST00000606066 ORAI2Q96SN7 254 aa20.1■□□□□ 0.81
CTSA-211ENST00000606066 ANKARQ7Z5J8 1434 aa20.1■□□□□ 0.81
CTSA-211ENST00000606066 SOS2Q07890 1332 aaPredicted RBP20.09■□□□□ 0.81
CTSA-211ENST00000606066 EVC2Q86UK5 1308 aa20.09■□□□□ 0.81
CTSA-211ENST00000606066 SRPK2P78362 688 aaKnown RBP20.08■□□□□ 0.81
CTSA-211ENST00000606066 NGLY1Q96IV0 654 aa20.08■□□□□ 0.81
CTSA-211ENST00000606066 USP47Q96K76 1375 aa20.08■□□□□ 0.8
CTSA-211ENST00000606066 SBNO2Q9Y2G9 1366 aa20.08■□□□□ 0.8
CTSA-211ENST00000606066 ST20-MTHFSA0A0A6YYL1 179 aa20.07■□□□□ 0.8
CTSA-211ENST00000606066 NUDT16Q96DE0 195 aaKnown RBP20.06■□□□□ 0.8
CTSA-211ENST00000606066 FMN2Q9NZ56 1722 aa20.06■□□□□ 0.8
CTSA-211ENST00000606066 TULP4Q9NRJ4 1543 aa20.06■□□□□ 0.8
CTSA-211ENST00000606066 FNBP4Q8N3X1 1017 aaPredicted RBP20.05■□□□□ 0.8
CTSA-211ENST00000606066 PHF8Q9UPP1 1060 aa20.05■□□□□ 0.8
CTSA-211ENST00000606066 NPHP3Q7Z494 1330 aa20.04■□□□□ 0.8
CTSA-211ENST00000606066 QRICH2Q9H0J4 1663 aa20.04■□□□□ 0.8
CTSA-211ENST00000606066 ADAMTS2O95450 1211 aa20.04■□□□□ 0.8
CTSA-211ENST00000606066 CCDC61Q9Y6R9 512 aa20.04■□□□□ 0.8
CTSA-211ENST00000606066 CABP2Q9NPB3 220 aa20.03■□□□□ 0.8
CTSA-211ENST00000606066 PRR36Q9H6K5 1346 aa20.02■□□□□ 0.8
CTSA-211ENST00000606066 FOXO3O43524 673 aa20.02■□□□□ 0.8
CTSA-211ENST00000606066 EIF4G2P78344 907 aaKnown RBP eCLIP20.02■□□□□ 0.8
CTSA-211ENST00000606066 USP21Q9UK80 565 aa20.01■□□□□ 0.79
CTSA-211ENST00000606066 TRPC5Q9UL62 973 aaPredicted RBP20.01■□□□□ 0.79
CTSA-211ENST00000606066 RGS12O14924 1447 aa20.01■□□□□ 0.79
CTSA-211ENST00000606066 PMFBP1Q8TBY8 1022 aa20■□□□□ 0.79
CTSA-211ENST00000606066 TESK2Q96S53 571 aa20■□□□□ 0.79
CTSA-211ENST00000606066 ATP7BP35670 1465 aa19.99■□□□□ 0.79
CTSA-211ENST00000606066 NHSL1Q5SYE7 1610 aa19.99■□□□□ 0.79
CTSA-211ENST00000606066 TMF1P82094 1093 aa19.99■□□□□ 0.79
CTSA-211ENST00000606066 PUS7Q96PZ0 661 aaKnown RBP19.99■□□□□ 0.79
CTSA-211ENST00000606066 PSME1Q06323 249 aa19.98■□□□□ 0.79
CTSA-211ENST00000606066 NGDNQ8NEJ9 315 aaKnown RBP19.98■□□□□ 0.79
CTSA-211ENST00000606066 ATAD2Q6PL18 1390 aa19.97■□□□□ 0.79
CTSA-211ENST00000606066 PLEKHG3A1L390 1219 aa19.97■□□□□ 0.79
CTSA-211ENST00000606066 KIF1AQ12756 1690 aa19.97■□□□□ 0.79
CTSA-211ENST00000606066 USP32Q8NFA0 1604 aa19.96■□□□□ 0.79
CTSA-211ENST00000606066 CDCA8Q53HL2 280 aa19.96■□□□□ 0.79
CTSA-211ENST00000606066 KRT28Q7Z3Y7 464 aa19.96■□□□□ 0.79
CTSA-211ENST00000606066 PPIP5K1Q6PFW1 1433 aa19.94■□□□□ 0.78
CTSA-211ENST00000606066 HSPA5P11021 654 aaKnown RBP19.94■□□□□ 0.78
CTSA-211ENST00000606066 CABP1Q9NZU7 370 aa19.94■□□□□ 0.78
CTSA-211ENST00000606066 ZEB1P37275 1124 aaPredicted RBP19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms