RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 DCAF11Q8TEB1 546 aa15.69■□□□□ 0.1
TUBE1-210ENST00000604967 CDC42BPGQ6DT37 1551 aa15.67■□□□□ 0.1
TUBE1-210ENST00000604967 JCADQ9P266 1359 aa15.66■□□□□ 0.1
TUBE1-210ENST00000604967 LAMC1P11047 1609 aa15.65■□□□□ 0.1
TUBE1-210ENST00000604967 SIN3AQ96ST3 1273 aa15.64■□□□□ 0.09
TUBE1-210ENST00000604967 SHPRHQ149N8 1683 aa15.63■□□□□ 0.09
TUBE1-210ENST00000604967 NUTM2FA1L443 756 aa15.63■□□□□ 0.09
TUBE1-210ENST00000604967 SIRT1Q96EB6 747 aa15.63■□□□□ 0.09
TUBE1-210ENST00000604967 PRAM1Q96QH2 718 aa15.63■□□□□ 0.09
TUBE1-210ENST00000604967 DLC1Q96QB1 1528 aa15.63■□□□□ 0.09
TUBE1-210ENST00000604967 SAFB2Q14151 953 aaKnown RBP eCLIP15.62■□□□□ 0.09
TUBE1-210ENST00000604967 POTEAQ6S8J7 498 aa15.62■□□□□ 0.09
TUBE1-210ENST00000604967 FMN2Q9NZ56 1722 aa15.62■□□□□ 0.09
TUBE1-210ENST00000604967 SOS2Q07890 1332 aaPredicted RBP15.61■□□□□ 0.09
TUBE1-210ENST00000604967 TRAK1Q9UPV9 953 aa15.6■□□□□ 0.09
TUBE1-210ENST00000604967 PNPLA6Q8IY17 1366 aa15.6■□□□□ 0.09
TUBE1-210ENST00000604967 PXDNQ92626 1479 aa15.59■□□□□ 0.09
TUBE1-210ENST00000604967 USP32Q8NFA0 1604 aa15.59■□□□□ 0.09
TUBE1-210ENST00000604967 SOCS7O14512 581 aa15.59■□□□□ 0.09
TUBE1-210ENST00000604967 NBPF1Q3BBV0 1214 aa15.59■□□□□ 0.09
TUBE1-210ENST00000604967 XPCQ01831 940 aaPredicted RBP15.58■□□□□ 0.08
TUBE1-210ENST00000604967 L3MBTL2Q969R5 705 aa15.58■□□□□ 0.08
TUBE1-210ENST00000604967 PHF23Q9BUL5 403 aaPredicted RBP15.58■□□□□ 0.08
TUBE1-210ENST00000604967 ESCO1Q5FWF5 840 aa15.57■□□□□ 0.08
TUBE1-210ENST00000604967 SPATA31A6Q5VVP1 1343 aa15.57■□□□□ 0.08
TUBE1-210ENST00000604967 RGPD8O14715 1765 aaPredicted RBP15.57■□□□□ 0.08
TUBE1-210ENST00000604967 FOXO3O43524 673 aa15.56■□□□□ 0.08
TUBE1-210ENST00000604967 HIRIP3Q9BW71 556 aaPredicted RBP15.56■□□□□ 0.08
TUBE1-210ENST00000604967 PRR36Q9H6K5 1346 aa15.56■□□□□ 0.08
TUBE1-210ENST00000604967 ADGRB2O60241 1585 aa15.56■□□□□ 0.08
TUBE1-210ENST00000604967 ARHGEF28Q8N1W1 1705 aaKnown RBP15.56■□□□□ 0.08
TUBE1-210ENST00000604967 NUTM2BA6NNL0 878 aaPredicted RBP15.54■□□□□ 0.08
TUBE1-210ENST00000604967 NUTM2EB1AL46 878 aaPredicted RBP15.54■□□□□ 0.08
TUBE1-210ENST00000604967 TRIM26Q12899 539 aaPredicted RBP15.54■□□□□ 0.08
TUBE1-210ENST00000604967 NUTM2AQ8IVF1 878 aaPredicted RBP15.54■□□□□ 0.08
TUBE1-210ENST00000604967 LRRC59Q96AG4 307 aaKnown RBP15.54■□□□□ 0.08
TUBE1-210ENST00000604967 STAC3Q96MF2 364 aa15.54■□□□□ 0.08
TUBE1-210ENST00000604967 MINK1Q8N4C8 1332 aaPredicted RBP15.53■□□□□ 0.08
TUBE1-210ENST00000604967 KIAA1210Q9ULL0 1709 aa15.52■□□□□ 0.08
TUBE1-210ENST00000604967 NEUROD1Q13562 356 aa15.52■□□□□ 0.08
TUBE1-210ENST00000604967 POGKQ9P215 609 aa15.52■□□□□ 0.08
TUBE1-210ENST00000604967 COL22A1Q8NFW1 1626 aaPredicted RBP15.5■□□□□ 0.07
TUBE1-210ENST00000604967 NBPF8Q3BBV2 869 aa15.5■□□□□ 0.07
TUBE1-210ENST00000604967 NPHP3Q7Z494 1330 aa15.49■□□□□ 0.07
TUBE1-210ENST00000604967 WASLO00401 505 aaPredicted RBP15.48■□□□□ 0.07
TUBE1-210ENST00000604967 PHF8Q9UPP1 1060 aa15.48■□□□□ 0.07
TUBE1-210ENST00000604967 KIF1AQ12756 1690 aa15.48■□□□□ 0.07
TUBE1-210ENST00000604967 ANKARQ7Z5J8 1434 aa15.47■□□□□ 0.07
TUBE1-210ENST00000604967 PMFBP1Q8TBY8 1022 aa15.47■□□□□ 0.07
TUBE1-210ENST00000604967 TULP4Q9NRJ4 1543 aa15.47■□□□□ 0.07
TUBE1-210ENST00000604967 TRPM1Q7Z4N2 1603 aa15.46■□□□□ 0.07
TUBE1-210ENST00000604967 ATP7BP35670 1465 aa15.46■□□□□ 0.07
TUBE1-210ENST00000604967 SPATA31A3Q5VYP0 1347 aa15.46■□□□□ 0.07
TUBE1-210ENST00000604967 ADAMTS2O95450 1211 aa15.46■□□□□ 0.07
TUBE1-210ENST00000604967 MEX3CQ5U5Q3 659 aaKnown RBP15.46■□□□□ 0.07
TUBE1-210ENST00000604967 KRT28Q7Z3Y7 464 aa15.46■□□□□ 0.07
TUBE1-210ENST00000604967 AFF2P51816 1311 aa15.45■□□□□ 0.06
TUBE1-210ENST00000604967 C8orf37Q96NL8 207 aa15.45■□□□□ 0.06
TUBE1-210ENST00000604967 TRPM3Q9HCF6 1732 aaPredicted RBP15.44■□□□□ 0.06
TUBE1-210ENST00000604967 CDK19Q9BWU1 502 aa15.43■□□□□ 0.06
TUBE1-210ENST00000604967 TNS3Q68CZ2 1445 aa15.42■□□□□ 0.06
TUBE1-210ENST00000604967 CABLES1Q8TDN4 633 aa15.41■□□□□ 0.06
TUBE1-210ENST00000604967 NUDT16Q96DE0 195 aaKnown RBP15.41■□□□□ 0.06
TUBE1-210ENST00000604967 TOPAZ1Q8N9V7 1692 aa15.41■□□□□ 0.06
TUBE1-210ENST00000604967 SBNO1A3KN83 1393 aa15.4■□□□□ 0.06
TUBE1-210ENST00000604967 ALS2Q96Q42 1657 aa15.39■□□□□ 0.05
TUBE1-210ENST00000604967 ZNF772Q68DY9 489 aaPredicted RBP15.39■□□□□ 0.05
TUBE1-210ENST00000604967 FNBP4Q8N3X1 1017 aaPredicted RBP15.39■□□□□ 0.05
TUBE1-210ENST00000604967 ABCA3Q99758 1704 aa15.39■□□□□ 0.05
TUBE1-210ENST00000604967 CENPJQ9HC77 1338 aaPredicted RBP15.39■□□□□ 0.05
TUBE1-210ENST00000604967 BCL9LQ86UU0 1499 aa15.39■□□□□ 0.05
TUBE1-210ENST00000604967 QRICH2Q9H0J4 1663 aa15.38■□□□□ 0.05
TUBE1-210ENST00000604967 GPRASP1Q5JY77 1395 aa15.38■□□□□ 0.05
TUBE1-210ENST00000604967 PLEKHG5O94827 1062 aa15.37■□□□□ 0.05
TUBE1-210ENST00000604967 PSME1Q06323 249 aa15.37■□□□□ 0.05
TUBE1-210ENST00000604967 NGLY1Q96IV0 654 aa15.37■□□□□ 0.05
TUBE1-210ENST00000604967 QTRT2Q9H974 415 aaKnown RBP15.37■□□□□ 0.05
TUBE1-210ENST00000604967 MARF1Q9Y4F3 1742 aaKnown RBP15.37■□□□□ 0.05
TUBE1-210ENST00000604967 CABP2Q9NPB3 220 aa15.36■□□□□ 0.05
TUBE1-210ENST00000604967 CRYBG1Q9Y4K1 1723 aa15.36■□□□□ 0.05
TUBE1-210ENST00000604967 POLR3AO14802 1390 aaPredicted RBP15.36■□□□□ 0.05
TUBE1-210ENST00000604967 ROCK2O75116 1388 aaKnown RBP15.36■□□□□ 0.05
TUBE1-210ENST00000604967 ATRNO75882 1429 aa15.35■□□□□ 0.05
TUBE1-210ENST00000604967 EIF3AQ14152 1382 aaKnown RBP15.35■□□□□ 0.05
TUBE1-210ENST00000604967 RGS12O14924 1447 aa15.34■□□□□ 0.05
TUBE1-210ENST00000604967 SLIT2O94813 1529 aa15.34■□□□□ 0.05
TUBE1-210ENST00000604967 PLEKHG3A1L390 1219 aa15.34■□□□□ 0.05
TUBE1-210ENST00000604967 USP21Q9UK80 565 aa15.34■□□□□ 0.05
TUBE1-210ENST00000604967 ACEP12821 1306 aa15.34■□□□□ 0.05
TUBE1-210ENST00000604967 RALGAPBQ86X10 1494 aa15.33■□□□□ 0.05
TUBE1-210ENST00000604967 RXRBP28702 533 aa15.33■□□□□ 0.04
TUBE1-210ENST00000604967 CCDC61Q9Y6R9 512 aa15.33■□□□□ 0.04
TUBE1-210ENST00000604967 ITSN1Q15811 1721 aa15.33■□□□□ 0.04
TUBE1-210ENST00000604967 LMOD2Q6P5Q4 547 aa15.32■□□□□ 0.04
TUBE1-210ENST00000604967 NGDNQ8NEJ9 315 aaKnown RBP15.32■□□□□ 0.04
TUBE1-210ENST00000604967 PCGF6Q9BYE7 350 aa15.32■□□□□ 0.04
TUBE1-210ENST00000604967 TONSLQ96HA7 1378 aa15.32■□□□□ 0.04
TUBE1-210ENST00000604967 FAM83GA6ND36 823 aa15.31■□□□□ 0.04
TUBE1-210ENST00000604967 ARHGEF10O15013 1369 aa15.31■□□□□ 0.04
TUBE1-210ENST00000604967 CDK12Q9NYV4 1490 aaPredicted RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 661.9 ms