RNA–Protein interactions for RNA: ENST00000603648.1

FOCAD-208, Transcript of focadhesin, humanhuman

TSL 4

Gene FOCAD, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-208ENST00000603648 CFHP08603 1231 aa9.7□□□□□ -0.86
FOCAD-208ENST00000603648 SMPD1P17405 629 aa9.69□□□□□ -0.86
FOCAD-208ENST00000603648 SPSB2Q99619 263 aa9.67□□□□□ -0.86
FOCAD-208ENST00000603648 FECHP22830 423 aa9.66□□□□□ -0.86
FOCAD-208ENST00000603648 VEGFBP49765 207 aa9.66□□□□□ -0.86
FOCAD-208ENST00000603648 SCUBE3Q8IX30 993 aa9.66□□□□□ -0.86
FOCAD-208ENST00000603648 FCF1Q9Y324 198 aaKnown RBP9.66□□□□□ -0.86
FOCAD-208ENST00000603648 MAP2K5Q13163 448 aa9.65□□□□□ -0.86
FOCAD-208ENST00000603648 SNIP1Q8TAD8 396 aaKnown RBP9.65□□□□□ -0.86
FOCAD-208ENST00000603648 DNAJB2P25686 324 aa9.64□□□□□ -0.87
FOCAD-208ENST00000603648 MINK1Q8N4C8 1332 aaPredicted RBP9.63□□□□□ -0.87
FOCAD-208ENST00000603648 NPAS3Q8IXF0 933 aa9.63□□□□□ -0.87
FOCAD-208ENST00000603648 KCNMA1Q12791 1236 aa9.62□□□□□ -0.87
FOCAD-208ENST00000603648 KRI1Q8N9T8 703 aaKnown RBP9.62□□□□□ -0.87
FOCAD-208ENST00000603648 SLC24A3Q9HC58 644 aa9.62□□□□□ -0.87
FOCAD-208ENST00000603648 J3QL48 77 aa9.61□□□□□ -0.87
FOCAD-208ENST00000603648 IRF6O14896 467 aa9.61□□□□□ -0.87
FOCAD-208ENST00000603648 ERBB4Q15303 1308 aa9.6□□□□□ -0.87
FOCAD-208ENST00000603648 ZBTB24O43167 697 aaPredicted RBP9.6□□□□□ -0.87
FOCAD-208ENST00000603648 HPS1Q92902 700 aa9.6□□□□□ -0.87
FOCAD-208ENST00000603648 TMEM134Q9H6X4 195 aa9.6□□□□□ -0.87
FOCAD-208ENST00000603648 H3BM21 787 aa9.59□□□□□ -0.87
FOCAD-208ENST00000603648 PUS10Q3MIT2 529 aaKnown RBP9.59□□□□□ -0.87
FOCAD-208ENST00000603648 TMEM151AQ8N4L1 468 aa9.59□□□□□ -0.87
FOCAD-208ENST00000603648 CCDC102AQ96A19 550 aa9.59□□□□□ -0.87
FOCAD-208ENST00000603648 AK7Q96M32 723 aa9.59□□□□□ -0.87
FOCAD-208ENST00000603648 WNT7AO00755 349 aa9.58□□□□□ -0.88
FOCAD-208ENST00000603648 ADGRG1Q9Y653 693 aa9.58□□□□□ -0.88
FOCAD-208ENST00000603648 GSK3AP49840 483 aa9.56□□□□□ -0.88
FOCAD-208ENST00000603648 OATP04181 439 aa9.55□□□□□ -0.88
FOCAD-208ENST00000603648 SLC10A3P09131 477 aa9.55□□□□□ -0.88
FOCAD-208ENST00000603648 MRGPRX2Q96LB1 330 aa9.55□□□□□ -0.88
FOCAD-208ENST00000603648 TRIM66O15016 1216 aa9.54□□□□□ -0.88
FOCAD-208ENST00000603648 GDF11O95390 407 aa9.54□□□□□ -0.88
FOCAD-208ENST00000603648 FAM161AQ3B820 660 aa9.54□□□□□ -0.88
FOCAD-208ENST00000603648 XP32Q5T750 250 aa9.54□□□□□ -0.88
FOCAD-208ENST00000603648 RBM46Q8TBY0 533 aaKnown RBP9.54□□□□□ -0.88
FOCAD-208ENST00000603648 PXYLP1Q8TE99 480 aa9.54□□□□□ -0.88
FOCAD-208ENST00000603648 METTL3Q86U44 580 aaKnown RBP9.53□□□□□ -0.88
FOCAD-208ENST00000603648 AMHR2Q16671 573 aa9.51□□□□□ -0.89
FOCAD-208ENST00000603648 PHOX2BQ99453 314 aa9.51□□□□□ -0.89
FOCAD-208ENST00000603648 RCCD1A6NED2 376 aa9.5□□□□□ -0.89
FOCAD-208ENST00000603648 RASSF7Q02833 373 aa9.5□□□□□ -0.89
FOCAD-208ENST00000603648 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.48□□□□□ -0.89
FOCAD-208ENST00000603648 BMP1P13497 986 aa9.48□□□□□ -0.89
FOCAD-208ENST00000603648 PDE4DQ08499 809 aa9.48□□□□□ -0.89
FOCAD-208ENST00000603648 TRIM32Q13049 653 aa9.47□□□□□ -0.89
FOCAD-208ENST00000603648 FAM160A2Q8N612 972 aaPredicted RBP9.47□□□□□ -0.89
FOCAD-208ENST00000603648 PRDM9Q9NQV7 894 aa9.47□□□□□ -0.89
FOCAD-208ENST00000603648 TRIM46Q7Z4K8 759 aa9.45□□□□□ -0.9
FOCAD-208ENST00000603648 REPIN1Q9BWE0 567 aaKnown RBP9.45□□□□□ -0.9
FOCAD-208ENST00000603648 FMNL1O95466 1100 aaPredicted RBP9.44□□□□□ -0.9
FOCAD-208ENST00000603648 BRPF1P55201 1214 aaPredicted RBP9.44□□□□□ -0.9
FOCAD-208ENST00000603648 PARP9Q8IXQ6 854 aa9.44□□□□□ -0.9
FOCAD-208ENST00000603648 THAP11Q96EK4 314 aa9.44□□□□□ -0.9
FOCAD-208ENST00000603648 CLCN1P35523 988 aa9.43□□□□□ -0.9
FOCAD-208ENST00000603648 MDM2Q00987 491 aaPredicted RBP9.43□□□□□ -0.9
FOCAD-208ENST00000603648 NLRP7Q8WX94 980 aa9.43□□□□□ -0.9
FOCAD-208ENST00000603648 RNF225M0QZC1 329 aaPredicted RBP9.42□□□□□ -0.9
FOCAD-208ENST00000603648 RSPH4AQ5TD94 716 aa9.42□□□□□ -0.9
FOCAD-208ENST00000603648 GPAT2Q6NUI2 795 aa9.42□□□□□ -0.9
FOCAD-208ENST00000603648 GPCPD1Q9NPB8 672 aa9.42□□□□□ -0.9
FOCAD-208ENST00000603648 TTLL12Q14166 644 aaPredicted RBP9.41□□□□□ -0.9
FOCAD-208ENST00000603648 NEUROD2Q15784 382 aa9.41□□□□□ -0.9
FOCAD-208ENST00000603648 KRTAP4-8Q9BYQ9 185 aa9.41□□□□□ -0.9
FOCAD-208ENST00000603648 DAXXQ9UER7 740 aaPredicted RBP9.41□□□□□ -0.9
FOCAD-208ENST00000603648 ALDH1A1P00352 501 aa9.4□□□□□ -0.9
FOCAD-208ENST00000603648 MORN1Q5T089 497 aa9.4□□□□□ -0.9
FOCAD-208ENST00000603648 CAPN5O15484 640 aaPredicted RBP9.39□□□□□ -0.91
FOCAD-208ENST00000603648 GIGYF2Q6Y7W6 1299 aaKnown RBP9.39□□□□□ -0.91
FOCAD-208ENST00000603648 GPBP1L1Q9HC44 474 aaPredicted RBP9.39□□□□□ -0.91
FOCAD-208ENST00000603648 KDM4CQ9H3R0 1056 aa9.38□□□□□ -0.91
FOCAD-208ENST00000603648 VSIG8P0DPA2 414 aa9.37□□□□□ -0.91
FOCAD-208ENST00000603648 RC3H1Q5TC82 1133 aaKnown RBP9.37□□□□□ -0.91
FOCAD-208ENST00000603648 FAM217BQ9NTX9 383 aaPredicted RBP9.37□□□□□ -0.91
FOCAD-208ENST00000603648 SLC27A5Q9Y2P5 690 aa9.36□□□□□ -0.91
FOCAD-208ENST00000603648 IGHA1P01876 353 aa9.35□□□□□ -0.91
FOCAD-208ENST00000603648 FUT2Q10981 343 aa9.35□□□□□ -0.91
FOCAD-208ENST00000603648 ZFP42Q96MM3 310 aa9.35□□□□□ -0.91
FOCAD-208ENST00000603648 MS4A1P11836 297 aa9.34□□□□□ -0.91
FOCAD-208ENST00000603648 SSTR3P32745 418 aaPredicted RBP9.34□□□□□ -0.91
FOCAD-208ENST00000603648 SULF1Q8IWU6 871 aa9.34□□□□□ -0.91
FOCAD-208ENST00000603648 ATP6V1AP38606 617 aa9.33□□□□□ -0.92
FOCAD-208ENST00000603648 MSS51Q4VC12 460 aa9.33□□□□□ -0.92
FOCAD-208ENST00000603648 ADAMTS8Q9UP79 889 aa9.33□□□□□ -0.92
FOCAD-208ENST00000603648 DDX11L8A8MPP1 907 aa9.32□□□□□ -0.92
FOCAD-208ENST00000603648 BRICD5Q6PL45 260 aa9.32□□□□□ -0.92
FOCAD-208ENST00000603648 CD46P15529 392 aa9.31□□□□□ -0.92
FOCAD-208ENST00000603648 RDH13Q8NBN7 331 aa9.31□□□□□ -0.92
FOCAD-208ENST00000603648 SALL2Q9Y467 1007 aaPredicted RBP9.31□□□□□ -0.92
FOCAD-208ENST00000603648 DNMT3AQ9Y6K1 912 aaPredicted RBP9.31□□□□□ -0.92
FOCAD-208ENST00000603648 WASF2Q9Y6W5 498 aa9.3□□□□□ -0.92
FOCAD-208ENST00000603648 SKOR1P84550 965 aa9.29□□□□□ -0.92
FOCAD-208ENST00000603648 RNF19BQ6ZMZ0 732 aa9.29□□□□□ -0.92
FOCAD-208ENST00000603648 DDRGK1Q96HY6 314 aa9.29□□□□□ -0.92
FOCAD-208ENST00000603648 FAM117AQ9C073 453 aa9.29□□□□□ -0.92
FOCAD-208ENST00000603648 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.28□□□□□ -0.92
FOCAD-208ENST00000603648 WNT7BP56706 349 aa9.28□□□□□ -0.92
FOCAD-208ENST00000603648 SOBPA7XYQ1 873 aa9.27□□□□□ -0.93
FOCAD-208ENST00000603648 PSMG3-AS1Q96PY0 264 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms