RNA–Protein interactions for RNA: ENST00000602800.1

PPFIA3-210, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 4

Gene PPFIA3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-210ENST00000602800 FNBP4Q8N3X1 1017 aaPredicted RBP28.75■■■□□ 2.19
PPFIA3-210ENST00000602800 FOXD1Q16676 465 aa28.74■■■□□ 2.19
PPFIA3-210ENST00000602800 ADGRF5Q8IZF2 1346 aa28.72■■■□□ 2.19
PPFIA3-210ENST00000602800 ATAD2Q6PL18 1390 aa28.72■■■□□ 2.19
PPFIA3-210ENST00000602800 RGL3Q3MIN7 710 aa28.71■■■□□ 2.19
PPFIA3-210ENST00000602800 STK26Q9P289 416 aa28.71■■■□□ 2.19
PPFIA3-210ENST00000602800 CCDC144AA2RUR9 1427 aa28.7■■■□□ 2.19
PPFIA3-210ENST00000602800 FOXO3O43524 673 aa28.7■■■□□ 2.18
PPFIA3-210ENST00000602800 PPLO60437 1756 aa28.7■■■□□ 2.18
PPFIA3-210ENST00000602800 LRPPRCP42704 1394 aaKnown RBP28.69■■■□□ 2.18
PPFIA3-210ENST00000602800 CDC42BPGQ6DT37 1551 aa28.69■■■□□ 2.18
PPFIA3-210ENST00000602800 XPCQ01831 940 aaPredicted RBP28.67■■■□□ 2.18
PPFIA3-210ENST00000602800 WAPLQ7Z5K2 1190 aa28.67■■■□□ 2.18
PPFIA3-210ENST00000602800 MYOM2P54296 1465 aa28.66■■■□□ 2.18
PPFIA3-210ENST00000602800 ANKRD30BQ9BXX2 1392 aa28.66■■■□□ 2.18
PPFIA3-210ENST00000602800 NUTM2FA1L443 756 aa28.66■■■□□ 2.18
PPFIA3-210ENST00000602800 ATRNO75882 1429 aa28.66■■■□□ 2.18
PPFIA3-210ENST00000602800 PXDNQ92626 1479 aa28.65■■■□□ 2.18
PPFIA3-210ENST00000602800 COL22A1Q8NFW1 1626 aaPredicted RBP28.65■■■□□ 2.18
PPFIA3-210ENST00000602800 TECPR2O15040 1411 aa28.64■■■□□ 2.18
PPFIA3-210ENST00000602800 ABCC11Q96J66 1382 aa28.62■■■□□ 2.17
PPFIA3-210ENST00000602800 TMEM132EQ6IEE7 984 aa28.62■■■□□ 2.17
PPFIA3-210ENST00000602800 SPATA31E1Q6ZUB1 1445 aa28.61■■■□□ 2.17
PPFIA3-210ENST00000602800 MPHOSPH9Q99550 1183 aa28.61■■■□□ 2.17
PPFIA3-210ENST00000602800 SRCAPQ6ZRS2 3230 aa28.61■■■□□ 2.17
PPFIA3-210ENST00000602800 BCL9LQ86UU0 1499 aa28.59■■■□□ 2.17
PPFIA3-210ENST00000602800 PLEKHH1Q9ULM0 1364 aa28.58■■■□□ 2.17
PPFIA3-210ENST00000602800 GJD4Q96KN9 370 aaPredicted RBP28.57■■■□□ 2.16
PPFIA3-210ENST00000602800 PIK3C2GO75747 1445 aa28.55■■■□□ 2.16
PPFIA3-210ENST00000602800 CCDC125Q86Z20 511 aa28.54■■■□□ 2.16
PPFIA3-210ENST00000602800 YTHDC2Q9H6S0 1430 aaKnown RBP28.53■■■□□ 2.16
PPFIA3-210ENST00000602800 SPATA31A3Q5VYP0 1347 aa28.53■■■□□ 2.16
PPFIA3-210ENST00000602800 ZRANB1Q9UGI0 708 aa28.53■■■□□ 2.16
PPFIA3-210ENST00000602800 KRT28Q7Z3Y7 464 aa28.52■■■□□ 2.16
PPFIA3-210ENST00000602800 UNC5CLQ8IV45 518 aa28.52■■■□□ 2.16
PPFIA3-210ENST00000602800 SIRT1Q96EB6 747 aa28.52■■■□□ 2.16
PPFIA3-210ENST00000602800 EP400Q96L91 3159 aa28.5■■■□□ 2.15
PPFIA3-210ENST00000602800 HAP1P54257 671 aaPredicted RBP28.48■■■□□ 2.15
PPFIA3-210ENST00000602800 C14orf93Q9H972 538 aaKnown RBP28.48■■■□□ 2.15
PPFIA3-210ENST00000602800 PSME1Q06323 249 aa28.47■■■□□ 2.15
PPFIA3-210ENST00000602800 KNDC1Q76NI1 1749 aa28.46■■■□□ 2.15
PPFIA3-210ENST00000602800 ACIN1Q9UKV3 1341 aaKnown RBP28.46■■■□□ 2.15
PPFIA3-210ENST00000602800 PHF8Q9UPP1 1060 aa28.46■■■□□ 2.15
PPFIA3-210ENST00000602800 DHX57Q6P158 1386 aaKnown RBP28.46■■■□□ 2.15
PPFIA3-210ENST00000602800 IFT172Q9UG01 1749 aa28.45■■■□□ 2.14
PPFIA3-210ENST00000602800 SLIT2O94813 1529 aa28.44■■■□□ 2.14
PPFIA3-210ENST00000602800 KIF1AQ12756 1690 aa28.44■■■□□ 2.14
PPFIA3-210ENST00000602800 FMN2Q9NZ56 1722 aa28.43■■■□□ 2.14
PPFIA3-210ENST00000602800 MARF1Q9Y4F3 1742 aaKnown RBP28.43■■■□□ 2.14
PPFIA3-210ENST00000602800 RALGAPBQ86X10 1494 aa28.43■■■□□ 2.14
PPFIA3-210ENST00000602800 CFAP70Q5T0N1 1121 aa28.43■■■□□ 2.14
PPFIA3-210ENST00000602800 TNS3Q68CZ2 1445 aa28.41■■■□□ 2.14
PPFIA3-210ENST00000602800 SAFB2Q14151 953 aaKnown RBP eCLIP28.4■■■□□ 2.14
PPFIA3-210ENST00000602800 LMOD2Q6P5Q4 547 aa28.4■■■□□ 2.14
PPFIA3-210ENST00000602800 PRAM1Q96QH2 718 aa28.4■■■□□ 2.14
PPFIA3-210ENST00000602800 PLEKHG5O94827 1062 aa28.39■■■□□ 2.14
PPFIA3-210ENST00000602800 CABLES1Q8TDN4 633 aa28.39■■■□□ 2.14
PPFIA3-210ENST00000602800 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.38■■■□□ 2.13
PPFIA3-210ENST00000602800 POGKQ9P215 609 aa28.37■■■□□ 2.13
PPFIA3-210ENST00000602800 NRXN1Q9ULB1 1477 aa28.37■■■□□ 2.13
PPFIA3-210ENST00000602800 SBNO1A3KN83 1393 aa28.37■■■□□ 2.13
PPFIA3-210ENST00000602800 USP32Q8NFA0 1604 aa28.36■■■□□ 2.13
PPFIA3-210ENST00000602800 VPS72Q15906 364 aa28.36■■■□□ 2.13
PPFIA3-210ENST00000602800 CCDC9Q9Y3X0 531 aaKnown RBP28.36■■■□□ 2.13
PPFIA3-210ENST00000602800 ARHGEF10O15013 1369 aa28.36■■■□□ 2.13
PPFIA3-210ENST00000602800 BLMP54132 1417 aaPredicted RBP28.35■■■□□ 2.13
PPFIA3-210ENST00000602800 SEPT12Q8IYM1 358 aa28.35■■■□□ 2.13
PPFIA3-210ENST00000602800 GLI3P10071 1580 aa28.35■■■□□ 2.13
PPFIA3-210ENST00000602800 SF3B2Q13435 895 aaKnown RBP28.33■■■□□ 2.13
PPFIA3-210ENST00000602800 PMFBP1Q8TBY8 1022 aa28.32■■■□□ 2.12
PPFIA3-210ENST00000602800 ANKARQ7Z5J8 1434 aa28.29■■■□□ 2.12
PPFIA3-210ENST00000602800 ONECUT3O60422 494 aaPredicted RBP28.28■■■□□ 2.12
PPFIA3-210ENST00000602800 FAM83GA6ND36 823 aa28.27■■■□□ 2.12
PPFIA3-210ENST00000602800 DEFB132Q7Z7B7 95 aa28.27■■■□□ 2.12
PPFIA3-210ENST00000602800 DLC1Q96QB1 1528 aa28.27■■■□□ 2.12
PPFIA3-210ENST00000602800 KRT27Q7Z3Y8 459 aa28.26■■■□□ 2.11
PPFIA3-210ENST00000602800 A0A0G2JS52 829 aa28.25■■■□□ 2.11
PPFIA3-210ENST00000602800 MYT1Q01538 1121 aa28.25■■■□□ 2.11
PPFIA3-210ENST00000602800 TRAK1Q9UPV9 953 aa28.25■■■□□ 2.11
PPFIA3-210ENST00000602800 HIRIP3Q9BW71 556 aaPredicted RBP28.24■■■□□ 2.11
PPFIA3-210ENST00000602800 RGPD8O14715 1765 aaPredicted RBP28.24■■■□□ 2.11
PPFIA3-210ENST00000602800 GPRASP1Q5JY77 1395 aa28.24■■■□□ 2.11
PPFIA3-210ENST00000602800 EIF3AQ14152 1382 aaKnown RBP28.23■■■□□ 2.11
PPFIA3-210ENST00000602800 MINK1Q8N4C8 1332 aaPredicted RBP28.2■■■□□ 2.11
PPFIA3-210ENST00000602800 BTG4Q9NY30 223 aa28.2■■■□□ 2.1
PPFIA3-210ENST00000602800 KDM2AQ9Y2K7 1162 aa28.2■■■□□ 2.1
PPFIA3-210ENST00000602800 RAB3GAP2Q9H2M9 1393 aa28.2■■■□□ 2.1
PPFIA3-210ENST00000602800 NWD2Q9ULI1 1742 aa28.2■■■□□ 2.1
PPFIA3-210ENST00000602800 PLCH1Q4KWH8 1693 aa28.19■■■□□ 2.1
PPFIA3-210ENST00000602800 ADGRB2O60241 1585 aa28.18■■■□□ 2.1
PPFIA3-210ENST00000602800 ADGRB1O14514 1584 aa28.17■■■□□ 2.1
PPFIA3-210ENST00000602800 WASLO00401 505 aaPredicted RBP28.17■■■□□ 2.1
PPFIA3-210ENST00000602800 FAM98CQ17RN3 349 aaKnown RBP28.17■■■□□ 2.1
PPFIA3-210ENST00000602800 DCAF11Q8TEB1 546 aa28.17■■■□□ 2.1
PPFIA3-210ENST00000602800 BRWD3Q6RI45 1802 aa28.16■■■□□ 2.1
PPFIA3-210ENST00000602800 NGDNQ8NEJ9 315 aaKnown RBP28.16■■■□□ 2.1
PPFIA3-210ENST00000602800 PRR36Q9H6K5 1346 aa28.16■■■□□ 2.1
PPFIA3-210ENST00000602800 BAG6P46379 1132 aa28.14■■■□□ 2.1
PPFIA3-210ENST00000602800 STAC3Q96MF2 364 aa28.14■■■□□ 2.1
PPFIA3-210ENST00000602800 ABCA3Q99758 1704 aa28.14■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms