RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 POGKQ9P215 609 aa23.98■■□□□ 1.43
PPFIA3-207ENST00000602716 XRN1Q8IZH2 1706 aaKnown RBP23.96■■□□□ 1.43
PPFIA3-207ENST00000602716 FAM135BQ49AJ0 1406 aa23.94■■□□□ 1.42
PPFIA3-207ENST00000602716 AMOTL2Q9Y2J4 779 aa23.93■■□□□ 1.42
PPFIA3-207ENST00000602716 PTCH1Q13635 1447 aa23.9■■□□□ 1.42
PPFIA3-207ENST00000602716 EVC2Q86UK5 1308 aa23.9■■□□□ 1.42
PPFIA3-207ENST00000602716 CDCA8Q53HL2 280 aa23.89■■□□□ 1.42
PPFIA3-207ENST00000602716 CABP2Q9NPB3 220 aa23.89■■□□□ 1.42
PPFIA3-207ENST00000602716 KCNA6P17658 529 aa23.89■■□□□ 1.41
PPFIA3-207ENST00000602716 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.88■■□□□ 1.41
PPFIA3-207ENST00000602716 PANK3Q9H999 370 aa23.88■■□□□ 1.41
PPFIA3-207ENST00000602716 PIK3R4Q99570 1358 aa23.87■■□□□ 1.41
PPFIA3-207ENST00000602716 SIRT1Q96EB6 747 aa23.87■■□□□ 1.41
PPFIA3-207ENST00000602716 CNGB1Q14028 1251 aaPredicted RBP23.86■■□□□ 1.41
PPFIA3-207ENST00000602716 ANP32CO43423 234 aa23.85■■□□□ 1.41
PPFIA3-207ENST00000602716 SLC24A1O60721 1099 aa23.85■■□□□ 1.41
PPFIA3-207ENST00000602716 CHD2O14647 1828 aaKnown RBP23.84■■□□□ 1.41
PPFIA3-207ENST00000602716 PER1O15534 1290 aaPredicted RBP23.83■■□□□ 1.41
PPFIA3-207ENST00000602716 SRPK2P78362 688 aaKnown RBP23.83■■□□□ 1.41
PPFIA3-207ENST00000602716 CDK19Q9BWU1 502 aa23.83■■□□□ 1.4
PPFIA3-207ENST00000602716 ADGRB2O60241 1585 aa23.82■■□□□ 1.4
PPFIA3-207ENST00000602716 STRCQ7RTU9 1775 aa23.82■■□□□ 1.4
PPFIA3-207ENST00000602716 SLC12A5Q9H2X9 1139 aa23.81■■□□□ 1.4
PPFIA3-207ENST00000602716 NWD1Q149M9 1564 aa23.8■■□□□ 1.4
PPFIA3-207ENST00000602716 TMC1Q8TDI8 760 aa23.79■■□□□ 1.4
PPFIA3-207ENST00000602716 RBM33Q96EV2 1170 aaKnown RBP23.79■■□□□ 1.4
PPFIA3-207ENST00000602716 PRKRIP1Q9H875 184 aaPredicted RBP23.79■■□□□ 1.4
PPFIA3-207ENST00000602716 WASLO00401 505 aaPredicted RBP23.78■■□□□ 1.4
PPFIA3-207ENST00000602716 PUS7Q96PZ0 661 aaKnown RBP23.77■■□□□ 1.4
PPFIA3-207ENST00000602716 ATAD2Q6PL18 1390 aa23.76■■□□□ 1.39
PPFIA3-207ENST00000602716 CARD14Q9BXL6 1004 aa23.76■■□□□ 1.39
PPFIA3-207ENST00000602716 PRR36Q9H6K5 1346 aa23.75■■□□□ 1.39
PPFIA3-207ENST00000602716 ATP7BP35670 1465 aa23.75■■□□□ 1.39
PPFIA3-207ENST00000602716 CD163L1Q9NR16 1453 aa23.75■■□□□ 1.39
PPFIA3-207ENST00000602716 NALCNQ8IZF0 1738 aa23.74■■□□□ 1.39
PPFIA3-207ENST00000602716 STRCP1A6NGW2 1772 aa23.73■■□□□ 1.39
PPFIA3-207ENST00000602716 A0A1W2PP64 1363 aa23.72■■□□□ 1.39
PPFIA3-207ENST00000602716 NUTM2FA1L443 756 aa23.71■■□□□ 1.39
PPFIA3-207ENST00000602716 NSD3Q9BZ95 1437 aa23.71■■□□□ 1.39
PPFIA3-207ENST00000602716 CC2D1BQ5T0F9 858 aaKnown RBP23.71■■□□□ 1.39
PPFIA3-207ENST00000602716 ANKRD36BQ8N2N9 1353 aa23.7■■□□□ 1.39
PPFIA3-207ENST00000602716 CCDC184Q52MB2 194 aa23.7■■□□□ 1.38
PPFIA3-207ENST00000602716 AMER1Q5JTC6 1135 aaPredicted RBP23.7■■□□□ 1.38
PPFIA3-207ENST00000602716 USP32Q8NFA0 1604 aa23.7■■□□□ 1.38
PPFIA3-207ENST00000602716 CABP1Q9NZU7 370 aa23.69■■□□□ 1.38
PPFIA3-207ENST00000602716 PPIP5K1Q6PFW1 1433 aa23.68■■□□□ 1.38
PPFIA3-207ENST00000602716 NINLQ9Y2I6 1382 aa23.68■■□□□ 1.38
PPFIA3-207ENST00000602716 NUDT16Q96DE0 195 aaKnown RBP23.68■■□□□ 1.38
PPFIA3-207ENST00000602716 KTN1Q86UP2 1357 aaKnown RBP23.67■■□□□ 1.38
PPFIA3-207ENST00000602716 PARD3Q8TEW0 1356 aa23.67■■□□□ 1.38
PPFIA3-207ENST00000602716 KNSTRNQ9Y448 316 aa23.67■■□□□ 1.38
PPFIA3-207ENST00000602716 TOPAZ1Q8N9V7 1692 aa23.67■■□□□ 1.38
PPFIA3-207ENST00000602716 NKTRP30414 1462 aaKnown RBP23.67■■□□□ 1.38
PPFIA3-207ENST00000602716 ADGRL3Q9HAR2 1447 aa23.66■■□□□ 1.38
PPFIA3-207ENST00000602716 CDC42BPGQ6DT37 1551 aa23.65■■□□□ 1.38
PPFIA3-207ENST00000602716 CCER2I3L3R5 266 aa23.65■■□□□ 1.38
PPFIA3-207ENST00000602716 FMN2Q9NZ56 1722 aa23.63■■□□□ 1.37
PPFIA3-207ENST00000602716 PROSER2Q86WR7 435 aaPredicted RBP23.6■■□□□ 1.37
PPFIA3-207ENST00000602716 CCDC61Q9Y6R9 512 aa23.6■■□□□ 1.37
PPFIA3-207ENST00000602716 CPSF1Q10570 1443 aaKnown RBP23.6■■□□□ 1.37
PPFIA3-207ENST00000602716 ZNF335Q9H4Z2 1342 aaPredicted RBP23.6■■□□□ 1.37
PPFIA3-207ENST00000602716 MYT1Q01538 1121 aa23.6■■□□□ 1.37
PPFIA3-207ENST00000602716 NPC1L1Q9UHC9 1359 aa23.59■■□□□ 1.37
PPFIA3-207ENST00000602716 TMEM94Q12767 1356 aa23.59■■□□□ 1.37
PPFIA3-207ENST00000602716 RALBP1Q15311 655 aa23.58■■□□□ 1.37
PPFIA3-207ENST00000602716 TERF2IPQ9NYB0 399 aa23.58■■□□□ 1.37
PPFIA3-207ENST00000602716 RGPD8O14715 1765 aaPredicted RBP23.58■■□□□ 1.36
PPFIA3-207ENST00000602716 MYBBP1AQ9BQG0 1328 aaKnown RBP23.57■■□□□ 1.36
PPFIA3-207ENST00000602716 C14orf37Q86TY3 774 aa23.56■■□□□ 1.36
PPFIA3-207ENST00000602716 ANKARQ7Z5J8 1434 aa23.56■■□□□ 1.36
PPFIA3-207ENST00000602716 HDGFL2Q7Z4V5 671 aaPredicted RBP23.55■■□□□ 1.36
PPFIA3-207ENST00000602716 MRS2Q9HD23 443 aa23.54■■□□□ 1.36
PPFIA3-207ENST00000602716 AKAP12Q02952 1782 aa23.54■■□□□ 1.36
PPFIA3-207ENST00000602716 ITSN1Q15811 1721 aa23.54■■□□□ 1.36
PPFIA3-207ENST00000602716 MON2Q7Z3U7 1717 aa23.54■■□□□ 1.36
PPFIA3-207ENST00000602716 PMFBP1Q8TBY8 1022 aa23.53■■□□□ 1.36
PPFIA3-207ENST00000602716 CGNL1Q0VF96 1302 aa23.53■■□□□ 1.36
PPFIA3-207ENST00000602716 SUPT16HQ9Y5B9 1047 aaKnown RBP23.52■■□□□ 1.36
PPFIA3-207ENST00000602716 ACEP12821 1306 aa23.52■■□□□ 1.36
PPFIA3-207ENST00000602716 NRKQ7Z2Y5 1582 aa23.52■■□□□ 1.36
PPFIA3-207ENST00000602716 PLEKHG3A1L390 1219 aa23.52■■□□□ 1.36
PPFIA3-207ENST00000602716 LRRC7Q96NW7 1537 aa23.51■■□□□ 1.35
PPFIA3-207ENST00000602716 XIRP1Q702N8 1843 aaKnown RBP23.5■■□□□ 1.35
PPFIA3-207ENST00000602716 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.5■■□□□ 1.35
PPFIA3-207ENST00000602716 GGNBP2Q9H3C7 697 aa23.5■■□□□ 1.35
PPFIA3-207ENST00000602716 EDC4Q6P2E9 1401 aaKnown RBP23.5■■□□□ 1.35
PPFIA3-207ENST00000602716 PPP2R1AP30153 589 aa23.49■■□□□ 1.35
PPFIA3-207ENST00000602716 FYB1O15117 783 aa23.48■■□□□ 1.35
PPFIA3-207ENST00000602716 POLR3AO14802 1390 aaPredicted RBP23.48■■□□□ 1.35
PPFIA3-207ENST00000602716 USP6P35125 1406 aa23.47■■□□□ 1.35
PPFIA3-207ENST00000602716 NLRP13Q86W25 1043 aa23.47■■□□□ 1.35
PPFIA3-207ENST00000602716 BRD4O60885 1362 aaPredicted RBP23.47■■□□□ 1.35
PPFIA3-207ENST00000602716 KIF20BQ96Q89 1820 aa23.47■■□□□ 1.35
PPFIA3-207ENST00000602716 TNNT2P45379 298 aaPredicted RBP23.47■■□□□ 1.35
PPFIA3-207ENST00000602716 NSD2O96028 1365 aa23.46■■□□□ 1.35
PPFIA3-207ENST00000602716 NME9Q86XW9 330 aa23.45■■□□□ 1.35
PPFIA3-207ENST00000602716 C19orf44Q9H6X5 657 aa23.45■■□□□ 1.35
PPFIA3-207ENST00000602716 ZRANB1Q9UGI0 708 aa23.45■■□□□ 1.35
PPFIA3-207ENST00000602716 MORC1Q86VD1 984 aa23.45■■□□□ 1.34
PPFIA3-207ENST00000602716 SSH2Q76I76 1423 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms