RNA–Protein interactions for RNA: ENST00000602260.5

ZNF544-219, Transcript of zinc finger protein 544, humanhuman

TSL 4

Gene ZNF544, Length 552 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544-219ENST00000602260 COL22A1Q8NFW1 1626 aaPredicted RBP16.95■□□□□ 0.3
ZNF544-219ENST00000602260 TECPR2O15040 1411 aa16.95■□□□□ 0.3
ZNF544-219ENST00000602260 SOS2Q07890 1332 aaPredicted RBP16.94■□□□□ 0.3
ZNF544-219ENST00000602260 TMEM132EQ6IEE7 984 aa16.92■□□□□ 0.3
ZNF544-219ENST00000602260 C14orf93Q9H972 538 aaKnown RBP16.92■□□□□ 0.3
ZNF544-219ENST00000602260 STK26Q9P289 416 aa16.92■□□□□ 0.3
ZNF544-219ENST00000602260 PIK3C2GO75747 1445 aa16.92■□□□□ 0.3
ZNF544-219ENST00000602260 DDX17Q92841 729 aaKnown RBP16.91■□□□□ 0.3
ZNF544-219ENST00000602260 C8orf37Q96NL8 207 aa16.91■□□□□ 0.3
ZNF544-219ENST00000602260 UPF1Q92900 1129 aaKnown RBP eCLIP16.9■□□□□ 0.3
ZNF544-219ENST00000602260 NPHP3Q7Z494 1330 aa16.9■□□□□ 0.3
ZNF544-219ENST00000602260 LRPPRCP42704 1394 aaKnown RBP16.89■□□□□ 0.3
ZNF544-219ENST00000602260 RBM6P78332 1123 aaKnown RBP16.89■□□□□ 0.29
ZNF544-219ENST00000602260 ORAI2Q96SN7 254 aa16.89■□□□□ 0.29
ZNF544-219ENST00000602260 ABCC11Q96J66 1382 aa16.89■□□□□ 0.29
ZNF544-219ENST00000602260 RGS12O14924 1447 aa16.88■□□□□ 0.29
ZNF544-219ENST00000602260 KIF1AQ12756 1690 aa16.88■□□□□ 0.29
ZNF544-219ENST00000602260 CFAP70Q5T0N1 1121 aa16.88■□□□□ 0.29
ZNF544-219ENST00000602260 MARF1Q9Y4F3 1742 aaKnown RBP16.87■□□□□ 0.29
ZNF544-219ENST00000602260 PXDNQ92626 1479 aa16.87■□□□□ 0.29
ZNF544-219ENST00000602260 NRXN1Q9ULB1 1477 aa16.87■□□□□ 0.29
ZNF544-219ENST00000602260 WAPLQ7Z5K2 1190 aa16.87■□□□□ 0.29
ZNF544-219ENST00000602260 FMN2Q9NZ56 1722 aa16.87■□□□□ 0.29
ZNF544-219ENST00000602260 MYOM2P54296 1465 aa16.86■□□□□ 0.29
ZNF544-219ENST00000602260 DCAF11Q8TEB1 546 aa16.86■□□□□ 0.29
ZNF544-219ENST00000602260 NGLY1Q96IV0 654 aa16.86■□□□□ 0.29
ZNF544-219ENST00000602260 QTRT2Q9H974 415 aaKnown RBP16.86■□□□□ 0.29
ZNF544-219ENST00000602260 KDM2AQ9Y2K7 1162 aa16.86■□□□□ 0.29
ZNF544-219ENST00000602260 ADAMTS2O95450 1211 aa16.85■□□□□ 0.29
ZNF544-219ENST00000602260 SIRT1Q96EB6 747 aa16.85■□□□□ 0.29
ZNF544-219ENST00000602260 STAC3Q96MF2 364 aa16.85■□□□□ 0.29
ZNF544-219ENST00000602260 YTHDC2Q9H6S0 1430 aaKnown RBP16.85■□□□□ 0.29
ZNF544-219ENST00000602260 ESCO1Q5FWF5 840 aa16.84■□□□□ 0.29
ZNF544-219ENST00000602260 DHX57Q6P158 1386 aaKnown RBP16.83■□□□□ 0.28
ZNF544-219ENST00000602260 PLEKHH1Q9ULM0 1364 aa16.82■□□□□ 0.28
ZNF544-219ENST00000602260 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.82■□□□□ 0.28
ZNF544-219ENST00000602260 FNBP4Q8N3X1 1017 aaPredicted RBP16.81■□□□□ 0.28
ZNF544-219ENST00000602260 USP21Q9UK80 565 aa16.81■□□□□ 0.28
ZNF544-219ENST00000602260 TRPC5Q9UL62 973 aaPredicted RBP16.81■□□□□ 0.28
ZNF544-219ENST00000602260 ATRNO75882 1429 aa16.8■□□□□ 0.28
ZNF544-219ENST00000602260 ATAD2Q6PL18 1390 aa16.8■□□□□ 0.28
ZNF544-219ENST00000602260 PRAM1Q96QH2 718 aa16.78■□□□□ 0.28
ZNF544-219ENST00000602260 DLC1Q96QB1 1528 aa16.77■□□□□ 0.28
ZNF544-219ENST00000602260 FOXO3O43524 673 aa16.77■□□□□ 0.28
ZNF544-219ENST00000602260 EP400Q96L91 3159 aa16.77■□□□□ 0.27
ZNF544-219ENST00000602260 NUTM2FA1L443 756 aa16.76■□□□□ 0.27
ZNF544-219ENST00000602260 POGKQ9P215 609 aa16.76■□□□□ 0.27
ZNF544-219ENST00000602260 USP32Q8NFA0 1604 aa16.76■□□□□ 0.27
ZNF544-219ENST00000602260 ADGRB2O60241 1585 aa16.76■□□□□ 0.27
ZNF544-219ENST00000602260 SAFB2Q14151 953 aaKnown RBP eCLIP16.75■□□□□ 0.27
ZNF544-219ENST00000602260 TRAK1Q9UPV9 953 aa16.75■□□□□ 0.27
ZNF544-219ENST00000602260 BCL9LQ86UU0 1499 aa16.74■□□□□ 0.27
ZNF544-219ENST00000602260 SPATA31A3Q5VYP0 1347 aa16.73■□□□□ 0.27
ZNF544-219ENST00000602260 ADGRB1O14514 1584 aa16.73■□□□□ 0.27
ZNF544-219ENST00000602260 TNS3Q68CZ2 1445 aa16.73■□□□□ 0.27
ZNF544-219ENST00000602260 XPCQ01831 940 aaPredicted RBP16.73■□□□□ 0.27
ZNF544-219ENST00000602260 RGPD8O14715 1765 aaPredicted RBP16.73■□□□□ 0.27
ZNF544-219ENST00000602260 ANKARQ7Z5J8 1434 aa16.72■□□□□ 0.27
ZNF544-219ENST00000602260 SLIT2O94813 1529 aa16.71■□□□□ 0.27
ZNF544-219ENST00000602260 ABCA3Q99758 1704 aa16.71■□□□□ 0.27
ZNF544-219ENST00000602260 NWD2Q9ULI1 1742 aa16.7■□□□□ 0.26
ZNF544-219ENST00000602260 SBNO1A3KN83 1393 aa16.7■□□□□ 0.26
ZNF544-219ENST00000602260 EIF3AQ14152 1382 aaKnown RBP16.7■□□□□ 0.26
ZNF544-219ENST00000602260 PSME1Q06323 249 aa16.7■□□□□ 0.26
ZNF544-219ENST00000602260 SIN3AQ96ST3 1273 aa16.7■□□□□ 0.26
ZNF544-219ENST00000602260 ARHGEF10O15013 1369 aa16.69■□□□□ 0.26
ZNF544-219ENST00000602260 TRIM26Q12899 539 aaPredicted RBP16.69■□□□□ 0.26
ZNF544-219ENST00000602260 KRT28Q7Z3Y7 464 aa16.69■□□□□ 0.26
ZNF544-219ENST00000602260 PHF8Q9UPP1 1060 aa16.69■□□□□ 0.26
ZNF544-219ENST00000602260 PLCH1Q4KWH8 1693 aa16.69■□□□□ 0.26
ZNF544-219ENST00000602260 GJD4Q96KN9 370 aaPredicted RBP16.68■□□□□ 0.26
ZNF544-219ENST00000602260 GLI3P10071 1580 aa16.68■□□□□ 0.26
ZNF544-219ENST00000602260 CCDC125Q86Z20 511 aa16.67■□□□□ 0.26
ZNF544-219ENST00000602260 UNC5CLQ8IV45 518 aa16.67■□□□□ 0.26
ZNF544-219ENST00000602260 L3MBTL2Q969R5 705 aa16.67■□□□□ 0.26
ZNF544-219ENST00000602260 HIRIP3Q9BW71 556 aaPredicted RBP16.67■□□□□ 0.26
ZNF544-219ENST00000602260 MINK1Q8N4C8 1332 aaPredicted RBP16.67■□□□□ 0.26
ZNF544-219ENST00000602260 RALGAPBQ86X10 1494 aa16.67■□□□□ 0.26
ZNF544-219ENST00000602260 HAP1P54257 671 aaPredicted RBP16.66■□□□□ 0.26
ZNF544-219ENST00000602260 NEUROD1Q13562 356 aa16.66■□□□□ 0.26
ZNF544-219ENST00000602260 SRCAPQ6ZRS2 3230 aa16.66■□□□□ 0.26
ZNF544-219ENST00000602260 TRPM3Q9HCF6 1732 aaPredicted RBP16.65■□□□□ 0.26
ZNF544-219ENST00000602260 NBPF1Q3BBV0 1214 aa16.65■□□□□ 0.26
ZNF544-219ENST00000602260 TULP4Q9NRJ4 1543 aa16.65■□□□□ 0.26
ZNF544-219ENST00000602260 ITSN1Q15811 1721 aa16.64■□□□□ 0.25
ZNF544-219ENST00000602260 WASLO00401 505 aaPredicted RBP16.63■□□□□ 0.25
ZNF544-219ENST00000602260 ALS2Q96Q42 1657 aa16.62■□□□□ 0.25
ZNF544-219ENST00000602260 ARHGEF28Q8N1W1 1705 aaKnown RBP16.62■□□□□ 0.25
ZNF544-219ENST00000602260 PMFBP1Q8TBY8 1022 aa16.61■□□□□ 0.25
ZNF544-219ENST00000602260 GPRASP1Q5JY77 1395 aa16.61■□□□□ 0.25
ZNF544-219ENST00000602260 BRWD3Q6RI45 1802 aa16.61■□□□□ 0.25
ZNF544-219ENST00000602260 NRAPQ86VF7 1730 aa16.6■□□□□ 0.25
ZNF544-219ENST00000602260 VPS72Q15906 364 aa16.6■□□□□ 0.25
ZNF544-219ENST00000602260 PRR36Q9H6K5 1346 aa16.6■□□□□ 0.25
ZNF544-219ENST00000602260 BLMP54132 1417 aaPredicted RBP16.6■□□□□ 0.25
ZNF544-219ENST00000602260 COL14A1Q05707 1796 aaKnown RBP16.59■□□□□ 0.25
ZNF544-219ENST00000602260 LMOD2Q6P5Q4 547 aa16.58■□□□□ 0.24
ZNF544-219ENST00000602260 ZRANB1Q9UGI0 708 aa16.58■□□□□ 0.24
ZNF544-219ENST00000602260 KIAA1210Q9ULL0 1709 aa16.58■□□□□ 0.24
ZNF544-219ENST00000602260 CRYBG1Q9Y4K1 1723 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 1623.3 ms