RNA–Protein interactions for RNA: ENST00000601801.2

NEAT1-203, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 4 BASIC

Gene NEAT1, Length 487 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-203ENST00000601801 PRAG1Q86YV5 1406 aa21.2■□□□□ 0.98
NEAT1-203ENST00000601801 SRCAPQ6ZRS2 3230 aa21.19■□□□□ 0.98
NEAT1-203ENST00000601801 SOS2Q07890 1332 aaPredicted RBP21.18■□□□□ 0.98
NEAT1-203ENST00000601801 SPATA31E1Q6ZUB1 1445 aa21.18■□□□□ 0.98
NEAT1-203ENST00000601801 COL22A1Q8NFW1 1626 aaPredicted RBP21.18■□□□□ 0.98
NEAT1-203ENST00000601801 USP21Q9UK80 565 aa21.17■□□□□ 0.98
NEAT1-203ENST00000601801 ADGRF5Q8IZF2 1346 aa21.17■□□□□ 0.98
NEAT1-203ENST00000601801 ANKRD30BQ9BXX2 1392 aa21.17■□□□□ 0.98
NEAT1-203ENST00000601801 TRPC5Q9UL62 973 aaPredicted RBP21.16■□□□□ 0.98
NEAT1-203ENST00000601801 IFT172Q9UG01 1749 aa21.15■□□□□ 0.98
NEAT1-203ENST00000601801 FNBP4Q8N3X1 1017 aaPredicted RBP21.15■□□□□ 0.98
NEAT1-203ENST00000601801 ATRNO75882 1429 aa21.14■□□□□ 0.98
NEAT1-203ENST00000601801 ORAI2Q96SN7 254 aa21.14■□□□□ 0.97
NEAT1-203ENST00000601801 MARF1Q9Y4F3 1742 aaKnown RBP21.14■□□□□ 0.97
NEAT1-203ENST00000601801 ZRANB1Q9UGI0 708 aa21.11■□□□□ 0.97
NEAT1-203ENST00000601801 STK26Q9P289 416 aa21.1■□□□□ 0.97
NEAT1-203ENST00000601801 EP400Q96L91 3159 aa21.09■□□□□ 0.97
NEAT1-203ENST00000601801 MYOM2P54296 1465 aa21.09■□□□□ 0.97
NEAT1-203ENST00000601801 PIK3C2GO75747 1445 aa21.09■□□□□ 0.97
NEAT1-203ENST00000601801 RAB3GAP2Q9H2M9 1393 aa21.09■□□□□ 0.97
NEAT1-203ENST00000601801 LRPPRCP42704 1394 aaKnown RBP21.08■□□□□ 0.96
NEAT1-203ENST00000601801 CDC42BPGQ6DT37 1551 aa21.07■□□□□ 0.96
NEAT1-203ENST00000601801 TECPR2O15040 1411 aa21.07■□□□□ 0.96
NEAT1-203ENST00000601801 TRIM26Q12899 539 aaPredicted RBP21.07■□□□□ 0.96
NEAT1-203ENST00000601801 BCL9LQ86UU0 1499 aa21.07■□□□□ 0.96
NEAT1-203ENST00000601801 TMEM132EQ6IEE7 984 aa21.06■□□□□ 0.96
NEAT1-203ENST00000601801 CCDC125Q86Z20 511 aa21.06■□□□□ 0.96
NEAT1-203ENST00000601801 ABCC11Q96J66 1382 aa21.06■□□□□ 0.96
NEAT1-203ENST00000601801 KNDC1Q76NI1 1749 aa21.05■□□□□ 0.96
NEAT1-203ENST00000601801 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.05■□□□□ 0.96
NEAT1-203ENST00000601801 WAPLQ7Z5K2 1190 aa21.05■□□□□ 0.96
NEAT1-203ENST00000601801 PXDNQ92626 1479 aa21.04■□□□□ 0.96
NEAT1-203ENST00000601801 ESCO1Q5FWF5 840 aa21.03■□□□□ 0.96
NEAT1-203ENST00000601801 YTHDC2Q9H6S0 1430 aaKnown RBP21.03■□□□□ 0.96
NEAT1-203ENST00000601801 NPHP3Q7Z494 1330 aa21.03■□□□□ 0.96
NEAT1-203ENST00000601801 PCGF6Q9BYE7 350 aa21.02■□□□□ 0.96
NEAT1-203ENST00000601801 C14orf93Q9H972 538 aaKnown RBP21.02■□□□□ 0.96
NEAT1-203ENST00000601801 GJD4Q96KN9 370 aaPredicted RBP21■□□□□ 0.95
NEAT1-203ENST00000601801 NRXN1Q9ULB1 1477 aa21■□□□□ 0.95
NEAT1-203ENST00000601801 PLEKHH1Q9ULM0 1364 aa20.99■□□□□ 0.95
NEAT1-203ENST00000601801 DHX57Q6P158 1386 aaKnown RBP20.98■□□□□ 0.95
NEAT1-203ENST00000601801 NUTM2FA1L443 756 aa20.98■□□□□ 0.95
NEAT1-203ENST00000601801 CFAP70Q5T0N1 1121 aa20.98■□□□□ 0.95
NEAT1-203ENST00000601801 SIRT1Q96EB6 747 aa20.98■□□□□ 0.95
NEAT1-203ENST00000601801 GLI3P10071 1580 aa20.97■□□□□ 0.95
NEAT1-203ENST00000601801 BRWD3Q6RI45 1802 aa20.97■□□□□ 0.95
NEAT1-203ENST00000601801 FOXO3O43524 673 aa20.96■□□□□ 0.95
NEAT1-203ENST00000601801 FMN2Q9NZ56 1722 aa20.95■□□□□ 0.94
NEAT1-203ENST00000601801 BLMP54132 1417 aaPredicted RBP20.95■□□□□ 0.94
NEAT1-203ENST00000601801 SLIT2O94813 1529 aa20.94■□□□□ 0.94
NEAT1-203ENST00000601801 HRCP23327 699 aa20.94■□□□□ 0.94
NEAT1-203ENST00000601801 XPCQ01831 940 aaPredicted RBP20.94■□□□□ 0.94
NEAT1-203ENST00000601801 RALGAPBQ86X10 1494 aa20.94■□□□□ 0.94
NEAT1-203ENST00000601801 UNC5CLQ8IV45 518 aa20.92■□□□□ 0.94
NEAT1-203ENST00000601801 KIF1AQ12756 1690 aa20.91■□□□□ 0.94
NEAT1-203ENST00000601801 USP32Q8NFA0 1604 aa20.91■□□□□ 0.94
NEAT1-203ENST00000601801 PRAM1Q96QH2 718 aa20.9■□□□□ 0.94
NEAT1-203ENST00000601801 DCAF11Q8TEB1 546 aa20.89■□□□□ 0.93
NEAT1-203ENST00000601801 POGKQ9P215 609 aa20.89■□□□□ 0.93
NEAT1-203ENST00000601801 KDM2AQ9Y2K7 1162 aa20.89■□□□□ 0.93
NEAT1-203ENST00000601801 LRP5O75197 1615 aa20.89■□□□□ 0.93
NEAT1-203ENST00000601801 SPATA31A3Q5VYP0 1347 aa20.88■□□□□ 0.93
NEAT1-203ENST00000601801 SAFB2Q14151 953 aaKnown RBP eCLIP20.88■□□□□ 0.93
NEAT1-203ENST00000601801 STAC3Q96MF2 364 aa20.88■□□□□ 0.93
NEAT1-203ENST00000601801 DLC1Q96QB1 1528 aa20.88■□□□□ 0.93
NEAT1-203ENST00000601801 RGPD8O14715 1765 aaPredicted RBP20.87■□□□□ 0.93
NEAT1-203ENST00000601801 DEFB132Q7Z7B7 95 aa20.86■□□□□ 0.93
NEAT1-203ENST00000601801 NWD2Q9ULI1 1742 aa20.86■□□□□ 0.93
NEAT1-203ENST00000601801 PLCH1Q4KWH8 1693 aa20.86■□□□□ 0.93
NEAT1-203ENST00000601801 ADGRB1O14514 1584 aa20.85■□□□□ 0.93
NEAT1-203ENST00000601801 PHF8Q9UPP1 1060 aa20.85■□□□□ 0.93
NEAT1-203ENST00000601801 KRT28Q7Z3Y7 464 aa20.84■□□□□ 0.93
NEAT1-203ENST00000601801 TRAK1Q9UPV9 953 aa20.83■□□□□ 0.93
NEAT1-203ENST00000601801 ABCA3Q99758 1704 aa20.83■□□□□ 0.92
NEAT1-203ENST00000601801 PSME1Q06323 249 aa20.82■□□□□ 0.92
NEAT1-203ENST00000601801 SF3B2Q13435 895 aaKnown RBP20.82■□□□□ 0.92
NEAT1-203ENST00000601801 SEPT12Q8IYM1 358 aa20.82■□□□□ 0.92
NEAT1-203ENST00000601801 VPS72Q15906 364 aa20.81■□□□□ 0.92
NEAT1-203ENST00000601801 ADGRB2O60241 1585 aa20.8■□□□□ 0.92
NEAT1-203ENST00000601801 ANKARQ7Z5J8 1434 aa20.8■□□□□ 0.92
NEAT1-203ENST00000601801 ONECUT3O60422 494 aaPredicted RBP20.8■□□□□ 0.92
NEAT1-203ENST00000601801 TNS3Q68CZ2 1445 aa20.79■□□□□ 0.92
NEAT1-203ENST00000601801 HIRIP3Q9BW71 556 aaPredicted RBP20.78■□□□□ 0.92
NEAT1-203ENST00000601801 EIF3AQ14152 1382 aaKnown RBP20.77■□□□□ 0.92
NEAT1-203ENST00000601801 HAP1P54257 671 aaPredicted RBP20.77■□□□□ 0.92
NEAT1-203ENST00000601801 MINK1Q8N4C8 1332 aaPredicted RBP20.77■□□□□ 0.91
NEAT1-203ENST00000601801 SBNO1A3KN83 1393 aa20.76■□□□□ 0.91
NEAT1-203ENST00000601801 KRT27Q7Z3Y8 459 aa20.76■□□□□ 0.91
NEAT1-203ENST00000601801 PMFBP1Q8TBY8 1022 aa20.76■□□□□ 0.91
NEAT1-203ENST00000601801 CABLES1Q8TDN4 633 aa20.75■□□□□ 0.91
NEAT1-203ENST00000601801 NRAPQ86VF7 1730 aa20.75■□□□□ 0.91
NEAT1-203ENST00000601801 LMOD2Q6P5Q4 547 aa20.74■□□□□ 0.91
NEAT1-203ENST00000601801 ARHGEF10O15013 1369 aa20.73■□□□□ 0.91
NEAT1-203ENST00000601801 WASLO00401 505 aaPredicted RBP20.73■□□□□ 0.91
NEAT1-203ENST00000601801 CCDC9Q9Y3X0 531 aaKnown RBP20.73■□□□□ 0.91
NEAT1-203ENST00000601801 RGPD1P0DJD0 1748 aa20.72■□□□□ 0.91
NEAT1-203ENST00000601801 TULP4Q9NRJ4 1543 aa20.72■□□□□ 0.91
NEAT1-203ENST00000601801 ARHGEF28Q8N1W1 1705 aaKnown RBP20.71■□□□□ 0.91
NEAT1-203ENST00000601801 PLEKHG5O94827 1062 aa20.71■□□□□ 0.91
NEAT1-203ENST00000601801 BAG6P46379 1132 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms