RNA–Protein interactions for RNA: ENST00000601614.6

SSBP4-211, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 628 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-211ENST00000601614 ZRANB1Q9UGI0 708 aa24.57■■□□□ 1.52
SSBP4-211ENST00000601614 PXDNQ92626 1479 aa24.56■■□□□ 1.52
SSBP4-211ENST00000601614 PPLO60437 1756 aa24.54■■□□□ 1.52
SSBP4-211ENST00000601614 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.52■■□□□ 1.52
SSBP4-211ENST00000601614 CDC42BPGQ6DT37 1551 aa24.52■■□□□ 1.52
SSBP4-211ENST00000601614 BRWD3Q6RI45 1802 aa24.51■■□□□ 1.51
SSBP4-211ENST00000601614 HFM1A2PYH4 1435 aa24.51■■□□□ 1.51
SSBP4-211ENST00000601614 GLI3P10071 1580 aa24.5■■□□□ 1.51
SSBP4-211ENST00000601614 XPCQ01831 940 aaPredicted RBP24.49■■□□□ 1.51
SSBP4-211ENST00000601614 VGFO15240 615 aaPredicted RBP24.48■■□□□ 1.51
SSBP4-211ENST00000601614 ESCO1Q5FWF5 840 aa24.48■■□□□ 1.51
SSBP4-211ENST00000601614 NPHP3Q7Z494 1330 aa24.48■■□□□ 1.51
SSBP4-211ENST00000601614 GJD4Q96KN9 370 aaPredicted RBP24.48■■□□□ 1.51
SSBP4-211ENST00000601614 CCDC125Q86Z20 511 aa24.47■■□□□ 1.51
SSBP4-211ENST00000601614 FOXO3O43524 673 aa24.45■■□□□ 1.5
SSBP4-211ENST00000601614 FOXD1Q16676 465 aa24.45■■□□□ 1.5
SSBP4-211ENST00000601614 PPARGC1BQ86YN6 1023 aaKnown RBP24.44■■□□□ 1.5
SSBP4-211ENST00000601614 SLIT2O94813 1529 aa24.43■■□□□ 1.5
SSBP4-211ENST00000601614 RALGAPBQ86X10 1494 aa24.43■■□□□ 1.5
SSBP4-211ENST00000601614 NAIPQ13075 1403 aa24.42■■□□□ 1.5
SSBP4-211ENST00000601614 RPGRIP1LQ68CZ1 1315 aa24.4■■□□□ 1.5
SSBP4-211ENST00000601614 NUTM2FA1L443 756 aa24.4■■□□□ 1.5
SSBP4-211ENST00000601614 BLMP54132 1417 aaPredicted RBP24.4■■□□□ 1.5
SSBP4-211ENST00000601614 USP32Q8NFA0 1604 aa24.39■■□□□ 1.5
SSBP4-211ENST00000601614 DEFB132Q7Z7B7 95 aa24.39■■□□□ 1.49
SSBP4-211ENST00000601614 FMN2Q9NZ56 1722 aa24.38■■□□□ 1.49
SSBP4-211ENST00000601614 UNC5CLQ8IV45 518 aa24.38■■□□□ 1.49
SSBP4-211ENST00000601614 RGPD8O14715 1765 aaPredicted RBP24.37■■□□□ 1.49
SSBP4-211ENST00000601614 WAPLQ7Z5K2 1190 aa24.36■■□□□ 1.49
SSBP4-211ENST00000601614 KNDC1Q76NI1 1749 aa24.35■■□□□ 1.49
SSBP4-211ENST00000601614 PLEKHH1Q9ULM0 1364 aa24.35■■□□□ 1.49
SSBP4-211ENST00000601614 LRP5O75197 1615 aa24.35■■□□□ 1.49
SSBP4-211ENST00000601614 TECPR2O15040 1411 aa24.35■■□□□ 1.49
SSBP4-211ENST00000601614 SPATA31A3Q5VYP0 1347 aa24.35■■□□□ 1.49
SSBP4-211ENST00000601614 ADGRF5Q8IZF2 1346 aa24.35■■□□□ 1.49
SSBP4-211ENST00000601614 KIF1AQ12756 1690 aa24.34■■□□□ 1.49
SSBP4-211ENST00000601614 LRPPRCP42704 1394 aaKnown RBP24.34■■□□□ 1.49
SSBP4-211ENST00000601614 IFT172Q9UG01 1749 aa24.34■■□□□ 1.49
SSBP4-211ENST00000601614 PLCH1Q4KWH8 1693 aa24.34■■□□□ 1.49
SSBP4-211ENST00000601614 STK26Q9P289 416 aa24.32■■□□□ 1.48
SSBP4-211ENST00000601614 ABCA3Q99758 1704 aa24.32■■□□□ 1.48
SSBP4-211ENST00000601614 RRBP1Q9P2E9 1410 aaKnown RBP24.3■■□□□ 1.48
SSBP4-211ENST00000601614 NWD2Q9ULI1 1742 aa24.3■■□□□ 1.48
SSBP4-211ENST00000601614 SEPT12Q8IYM1 358 aa24.29■■□□□ 1.48
SSBP4-211ENST00000601614 CCDC144AA2RUR9 1427 aa24.27■■□□□ 1.48
SSBP4-211ENST00000601614 TMEM132EQ6IEE7 984 aa24.27■■□□□ 1.48
SSBP4-211ENST00000601614 SLC4A1APQ9BWU0 796 aaKnown RBP24.27■■□□□ 1.48
SSBP4-211ENST00000601614 KRT28Q7Z3Y7 464 aa24.26■■□□□ 1.47
SSBP4-211ENST00000601614 CABLES1Q8TDN4 633 aa24.26■■□□□ 1.47
SSBP4-211ENST00000601614 ABCC11Q96J66 1382 aa24.26■■□□□ 1.47
SSBP4-211ENST00000601614 TNS3Q68CZ2 1445 aa24.25■■□□□ 1.47
SSBP4-211ENST00000601614 VPS72Q15906 364 aa24.24■■□□□ 1.47
SSBP4-211ENST00000601614 SPATA31E1Q6ZUB1 1445 aa24.24■■□□□ 1.47
SSBP4-211ENST00000601614 NRAPQ86VF7 1730 aa24.22■■□□□ 1.47
SSBP4-211ENST00000601614 ONECUT3O60422 494 aaPredicted RBP24.22■■□□□ 1.47
SSBP4-211ENST00000601614 SF3B2Q13435 895 aaKnown RBP24.22■■□□□ 1.47
SSBP4-211ENST00000601614 PIK3C2GO75747 1445 aa24.21■■□□□ 1.47
SSBP4-211ENST00000601614 PLEKHG5O94827 1062 aa24.21■■□□□ 1.47
SSBP4-211ENST00000601614 RGL3Q3MIN7 710 aa24.21■■□□□ 1.47
SSBP4-211ENST00000601614 YTHDC2Q9H6S0 1430 aaKnown RBP24.2■■□□□ 1.46
SSBP4-211ENST00000601614 PSDA5PKW4 1024 aaPredicted RBP24.2■■□□□ 1.46
SSBP4-211ENST00000601614 KRT27Q7Z3Y8 459 aa24.2■■□□□ 1.46
SSBP4-211ENST00000601614 CCDC9Q9Y3X0 531 aaKnown RBP24.18■■□□□ 1.46
SSBP4-211ENST00000601614 HAP1P54257 671 aaPredicted RBP24.17■■□□□ 1.46
SSBP4-211ENST00000601614 PHF8Q9UPP1 1060 aa24.17■■□□□ 1.46
SSBP4-211ENST00000601614 NRXN1Q9ULB1 1477 aa24.17■■□□□ 1.46
SSBP4-211ENST00000601614 ANKRD30BQ9BXX2 1392 aa24.16■■□□□ 1.46
SSBP4-211ENST00000601614 HRCP23327 699 aa24.15■■□□□ 1.46
SSBP4-211ENST00000601614 SBNO1A3KN83 1393 aa24.15■■□□□ 1.46
SSBP4-211ENST00000601614 FAM83GA6ND36 823 aa24.14■■□□□ 1.45
SSBP4-211ENST00000601614 TRPM3Q9HCF6 1732 aaPredicted RBP24.13■■□□□ 1.45
SSBP4-211ENST00000601614 RGPD1P0DJD0 1748 aa24.13■■□□□ 1.45
SSBP4-211ENST00000601614 PSME1Q06323 249 aa24.12■■□□□ 1.45
SSBP4-211ENST00000601614 BAG6P46379 1132 aa24.11■■□□□ 1.45
SSBP4-211ENST00000601614 LMOD2Q6P5Q4 547 aa24.11■■□□□ 1.45
SSBP4-211ENST00000601614 TNS1Q9HBL0 1735 aaKnown RBP24.1■■□□□ 1.45
SSBP4-211ENST00000601614 FAM98CQ17RN3 349 aaKnown RBP24.1■■□□□ 1.45
SSBP4-211ENST00000601614 SIRT1Q96EB6 747 aa24.1■■□□□ 1.45
SSBP4-211ENST00000601614 ARHGEF10O15013 1369 aa24.1■■□□□ 1.45
SSBP4-211ENST00000601614 ALS2Q96Q42 1657 aa24.09■■□□□ 1.45
SSBP4-211ENST00000601614 A0A0G2JS52 829 aa24.09■■□□□ 1.45
SSBP4-211ENST00000601614 MYT1Q01538 1121 aa24.09■■□□□ 1.45
SSBP4-211ENST00000601614 CRYBG1Q9Y4K1 1723 aa24.08■■□□□ 1.45
SSBP4-211ENST00000601614 EN1Q05925 392 aaPredicted RBP24.08■■□□□ 1.45
SSBP4-211ENST00000601614 FAM182BQ5T319 152 aa24.08■■□□□ 1.45
SSBP4-211ENST00000601614 COL14A1Q05707 1796 aaKnown RBP24.08■■□□□ 1.44
SSBP4-211ENST00000601614 THSD7AQ9UPZ6 1657 aa24.06■■□□□ 1.44
SSBP4-211ENST00000601614 SAFB2Q14151 953 aaKnown RBP eCLIP24.06■■□□□ 1.441e-6■■■■□ 20.5
SSBP4-211ENST00000601614 PMFBP1Q8TBY8 1022 aa24.06■■□□□ 1.44
SSBP4-211ENST00000601614 C14orf93Q9H972 538 aaKnown RBP24.06■■□□□ 1.44
SSBP4-211ENST00000601614 BTG4Q9NY30 223 aa24.05■■□□□ 1.44
SSBP4-211ENST00000601614 CFAP70Q5T0N1 1121 aa24.04■■□□□ 1.44
SSBP4-211ENST00000601614 PRAM1Q96QH2 718 aa24.04■■□□□ 1.44
SSBP4-211ENST00000601614 ADGRB2O60241 1585 aa24.03■■□□□ 1.44
SSBP4-211ENST00000601614 ANKARQ7Z5J8 1434 aa24.02■■□□□ 1.44
SSBP4-211ENST00000601614 R3HDM1Q15032 1099 aaKnown RBP24.02■■□□□ 1.44
SSBP4-211ENST00000601614 MPHOSPH9Q99550 1183 aa24.02■■□□□ 1.44
SSBP4-211ENST00000601614 DHX57Q6P158 1386 aaKnown RBP24.01■■□□□ 1.43
SSBP4-211ENST00000601614 DISP2A7MBM2 1401 aa24.01■■□□□ 1.43
SSBP4-211ENST00000601614 DLC1Q96QB1 1528 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms