RNA–Protein interactions for RNA: ENST00000601471.1

LINC00649-212, long intergenic non-protein coding RNA 649, humanhuman

TSL 5 BASIC

Gene LINC00649, Length 538 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-212ENST00000601471 BRINP3Q76B58 766 aa13.92□□□□□ -0.18
LINC00649-212ENST00000601471 MED1Q15648 1581 aaPredicted RBP13.92□□□□□ -0.18
LINC00649-212ENST00000601471 TRPM1Q7Z4N2 1603 aa13.91□□□□□ -0.18
LINC00649-212ENST00000601471 SIN3AQ96ST3 1273 aa13.9□□□□□ -0.18
LINC00649-212ENST00000601471 STK26Q9P289 416 aa13.9□□□□□ -0.18
LINC00649-212ENST00000601471 KDM2AQ9Y2K7 1162 aa13.9□□□□□ -0.18
LINC00649-212ENST00000601471 SHPRHQ149N8 1683 aa13.9□□□□□ -0.18
LINC00649-212ENST00000601471 WAPLQ7Z5K2 1190 aa13.89□□□□□ -0.19
LINC00649-212ENST00000601471 L3MBTL2Q969R5 705 aa13.89□□□□□ -0.19
LINC00649-212ENST00000601471 USP32Q8NFA0 1604 aa13.87□□□□□ -0.19
LINC00649-212ENST00000601471 KIF1AQ12756 1690 aa13.87□□□□□ -0.19
LINC00649-212ENST00000601471 PRAM1Q96QH2 718 aa13.86□□□□□ -0.19
LINC00649-212ENST00000601471 JCADQ9P266 1359 aa13.84□□□□□ -0.19
LINC00649-212ENST00000601471 ANKARQ7Z5J8 1434 aa13.84□□□□□ -0.19
LINC00649-212ENST00000601471 PXDNQ92626 1479 aa13.83□□□□□ -0.2
LINC00649-212ENST00000601471 TRAK1Q9UPV9 953 aa13.83□□□□□ -0.2
LINC00649-212ENST00000601471 TULP4Q9NRJ4 1543 aa13.83□□□□□ -0.2
LINC00649-212ENST00000601471 RGPD8O14715 1765 aaPredicted RBP13.83□□□□□ -0.2
LINC00649-212ENST00000601471 GPRASP1Q5JY77 1395 aa13.83□□□□□ -0.2
LINC00649-212ENST00000601471 NEUROD1Q13562 356 aa13.82□□□□□ -0.2
LINC00649-212ENST00000601471 NBPF1Q3BBV0 1214 aa13.82□□□□□ -0.2
LINC00649-212ENST00000601471 ORAI2Q96SN7 254 aa13.82□□□□□ -0.2
LINC00649-212ENST00000601471 SOS2Q07890 1332 aaPredicted RBP13.82□□□□□ -0.2
LINC00649-212ENST00000601471 COL22A1Q8NFW1 1626 aaPredicted RBP13.82□□□□□ -0.2
LINC00649-212ENST00000601471 TOPAZ1Q8N9V7 1692 aa13.81□□□□□ -0.2
LINC00649-212ENST00000601471 RALGAPBQ86X10 1494 aa13.8□□□□□ -0.2
LINC00649-212ENST00000601471 LRP6O75581 1613 aa13.8□□□□□ -0.2
LINC00649-212ENST00000601471 QRICH2Q9H0J4 1663 aa13.8□□□□□ -0.2
LINC00649-212ENST00000601471 CLSPNQ9HAW4 1339 aa13.8□□□□□ -0.2
LINC00649-212ENST00000601471 TONSLQ96HA7 1378 aa13.8□□□□□ -0.2
LINC00649-212ENST00000601471 DISP3Q9P2K9 1392 aa13.8□□□□□ -0.2
LINC00649-212ENST00000601471 ATP7BP35670 1465 aa13.8□□□□□ -0.2
LINC00649-212ENST00000601471 ITSN1Q15811 1721 aa13.79□□□□□ -0.2
LINC00649-212ENST00000601471 PCGF6Q9BYE7 350 aa13.79□□□□□ -0.2
LINC00649-212ENST00000601471 POGKQ9P215 609 aa13.79□□□□□ -0.2
LINC00649-212ENST00000601471 SPATA31A6Q5VVP1 1343 aa13.79□□□□□ -0.2
LINC00649-212ENST00000601471 EIF3AQ14152 1382 aaKnown RBP13.79□□□□□ -0.2
LINC00649-212ENST00000601471 NBPF8Q3BBV2 869 aa13.78□□□□□ -0.2
LINC00649-212ENST00000601471 PNPLA6Q8IY17 1366 aa13.78□□□□□ -0.2
LINC00649-212ENST00000601471 SAFB2Q14151 953 aaKnown RBP eCLIP13.77□□□□□ -0.21
LINC00649-212ENST00000601471 NPHP3Q7Z494 1330 aa13.77□□□□□ -0.21
LINC00649-212ENST00000601471 DDX17Q92841 729 aaKnown RBP13.77□□□□□ -0.21
LINC00649-212ENST00000601471 ROCK2O75116 1388 aaKnown RBP13.76□□□□□ -0.21
LINC00649-212ENST00000601471 PRR36Q9H6K5 1346 aa13.76□□□□□ -0.21
LINC00649-212ENST00000601471 WASLO00401 505 aaPredicted RBP13.76□□□□□ -0.21
LINC00649-212ENST00000601471 ESCO1Q5FWF5 840 aa13.76□□□□□ -0.21
LINC00649-212ENST00000601471 LRRC59Q96AG4 307 aaKnown RBP13.76□□□□□ -0.21
LINC00649-212ENST00000601471 TRPM3Q9HCF6 1732 aaPredicted RBP13.76□□□□□ -0.21
LINC00649-212ENST00000601471 MINK1Q8N4C8 1332 aaPredicted RBP13.75□□□□□ -0.21
LINC00649-212ENST00000601471 CENPJQ9HC77 1338 aaPredicted RBP13.74□□□□□ -0.21
LINC00649-212ENST00000601471 HIRIP3Q9BW71 556 aaPredicted RBP13.74□□□□□ -0.21
LINC00649-212ENST00000601471 SBNO2Q9Y2G9 1366 aa13.73□□□□□ -0.21
LINC00649-212ENST00000601471 NUTM2FA1L443 756 aa13.73□□□□□ -0.21
LINC00649-212ENST00000601471 PHF8Q9UPP1 1060 aa13.73□□□□□ -0.21
LINC00649-212ENST00000601471 FOXO3O43524 673 aa13.72□□□□□ -0.21
LINC00649-212ENST00000601471 ALS2Q96Q42 1657 aa13.72□□□□□ -0.21
LINC00649-212ENST00000601471 ABCA3Q99758 1704 aa13.71□□□□□ -0.21
LINC00649-212ENST00000601471 RGS17Q9UGC6 210 aaPredicted RBP13.71□□□□□ -0.21
LINC00649-212ENST00000601471 TIMELESSQ9UNS1 1208 aa13.71□□□□□ -0.21
LINC00649-212ENST00000601471 TNS3Q68CZ2 1445 aa13.71□□□□□ -0.22
LINC00649-212ENST00000601471 SBNO1A3KN83 1393 aa13.71□□□□□ -0.22
LINC00649-212ENST00000601471 MARF1Q9Y4F3 1742 aaKnown RBP13.7□□□□□ -0.22
LINC00649-212ENST00000601471 POLR3AO14802 1390 aaPredicted RBP13.7□□□□□ -0.22
LINC00649-212ENST00000601471 SPATA31A3Q5VYP0 1347 aa13.69□□□□□ -0.22
LINC00649-212ENST00000601471 CRYBG1Q9Y4K1 1723 aa13.69□□□□□ -0.22
LINC00649-212ENST00000601471 ILDR2Q71H61 639 aa13.68□□□□□ -0.22
LINC00649-212ENST00000601471 CDK19Q9BWU1 502 aa13.68□□□□□ -0.22
LINC00649-212ENST00000601471 XPCQ01831 940 aaPredicted RBP13.67□□□□□ -0.22
LINC00649-212ENST00000601471 NUDT16Q96DE0 195 aaKnown RBP13.67□□□□□ -0.22
LINC00649-212ENST00000601471 PHF23Q9BUL5 403 aaPredicted RBP13.67□□□□□ -0.22
LINC00649-212ENST00000601471 KRT28Q7Z3Y7 464 aa13.66□□□□□ -0.22
LINC00649-212ENST00000601471 CARD11Q9BXL7 1154 aa13.66□□□□□ -0.22
LINC00649-212ENST00000601471 PLEKHG3A1L390 1219 aa13.65□□□□□ -0.22
LINC00649-212ENST00000601471 PMFBP1Q8TBY8 1022 aa13.65□□□□□ -0.22
LINC00649-212ENST00000601471 CCDC61Q9Y6R9 512 aa13.65□□□□□ -0.22
LINC00649-212ENST00000601471 ARHGEF10O15013 1369 aa13.65□□□□□ -0.22
LINC00649-212ENST00000601471 PPIP5K1Q6PFW1 1433 aa13.64□□□□□ -0.23
LINC00649-212ENST00000601471 EP400Q96L91 3159 aa13.64□□□□□ -0.23
LINC00649-212ENST00000601471 NRKQ7Z2Y5 1582 aa13.63□□□□□ -0.23
LINC00649-212ENST00000601471 PSME1Q06323 249 aa13.63□□□□□ -0.23
LINC00649-212ENST00000601471 AKAP12Q02952 1782 aa13.63□□□□□ -0.23
LINC00649-212ENST00000601471 EVC2Q86UK5 1308 aa13.63□□□□□ -0.23
LINC00649-212ENST00000601471 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.62□□□□□ -0.23
LINC00649-212ENST00000601471 PHRF1Q9P1Y6 1649 aaKnown RBP13.61□□□□□ -0.23
LINC00649-212ENST00000601471 BRD4O60885 1362 aaPredicted RBP13.61□□□□□ -0.23
LINC00649-212ENST00000601471 NUTM2BA6NNL0 878 aaPredicted RBP13.61□□□□□ -0.23
LINC00649-212ENST00000601471 NUTM2EB1AL46 878 aaPredicted RBP13.61□□□□□ -0.23
LINC00649-212ENST00000601471 NUTM2AQ8IVF1 878 aaPredicted RBP13.61□□□□□ -0.23
LINC00649-212ENST00000601471 CABP2Q9NPB3 220 aa13.61□□□□□ -0.23
LINC00649-212ENST00000601471 SSH2Q76I76 1423 aa13.61□□□□□ -0.23
LINC00649-212ENST00000601471 ACEP12821 1306 aa13.61□□□□□ -0.23
LINC00649-212ENST00000601471 ATAD2Q6PL18 1390 aa13.6□□□□□ -0.23
LINC00649-212ENST00000601471 SRPK2P78362 688 aaKnown RBP13.6□□□□□ -0.23
LINC00649-212ENST00000601471 MEX3CQ5U5Q3 659 aaKnown RBP13.6□□□□□ -0.23
LINC00649-212ENST00000601471 POTEAQ6S8J7 498 aa13.6□□□□□ -0.23
LINC00649-212ENST00000601471 MON2Q7Z3U7 1717 aa13.6□□□□□ -0.23
LINC00649-212ENST00000601471 CCER1Q8TC90 406 aaPredicted RBP13.6□□□□□ -0.23
LINC00649-212ENST00000601471 TESK2Q96S53 571 aa13.6□□□□□ -0.23
LINC00649-212ENST00000601471 PLCH1Q4KWH8 1693 aa13.59□□□□□ -0.23
LINC00649-212ENST00000601471 NWD2Q9ULI1 1742 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms