RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 PLEKHH1Q9ULM0 1364 aa31.2■■■□□ 2.59
IRF3-228ENST00000601291 TULP4Q9NRJ4 1543 aa31.2■■■□□ 2.59
IRF3-228ENST00000601291 MINK1Q8N4C8 1332 aaPredicted RBP31.19■■■□□ 2.58
IRF3-228ENST00000601291 PUS7Q96PZ0 661 aaKnown RBP31.17■■■□□ 2.58
IRF3-228ENST00000601291 CHD2O14647 1828 aaKnown RBP31.15■■■□□ 2.58
IRF3-228ENST00000601291 KCNA6P17658 529 aa31.11■■■□□ 2.57
IRF3-228ENST00000601291 MYOM1P52179 1685 aa31.11■■■□□ 2.57
IRF3-228ENST00000601291 SRPK2P78362 688 aaKnown RBP31.09■■■□□ 2.57
IRF3-228ENST00000601291 ADGRB2O60241 1585 aa31.08■■■□□ 2.57
IRF3-228ENST00000601291 NWD1Q149M9 1564 aa31.08■■■□□ 2.57
IRF3-228ENST00000601291 ATAD2Q6PL18 1390 aa31.07■■■□□ 2.56
IRF3-228ENST00000601291 STRCQ7RTU9 1775 aa31.07■■■□□ 2.56
IRF3-228ENST00000601291 ANP32CO43423 234 aa31.06■■■□□ 2.56
IRF3-228ENST00000601291 MIER1Q8N108 512 aa31.05■■■□□ 2.56
IRF3-228ENST00000601291 CDK19Q9BWU1 502 aa31.05■■■□□ 2.56
IRF3-228ENST00000601291 CABP2Q9NPB3 220 aa31.05■■■□□ 2.56
IRF3-228ENST00000601291 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.04■■■□□ 2.56
IRF3-228ENST00000601291 NINLQ9Y2I6 1382 aa31.03■■■□□ 2.56
IRF3-228ENST00000601291 WASLO00401 505 aaPredicted RBP31.03■■■□□ 2.56
IRF3-228ENST00000601291 PANK3Q9H999 370 aa31.02■■■□□ 2.56
IRF3-228ENST00000601291 NKTRP30414 1462 aaKnown RBP31■■■□□ 2.55
IRF3-228ENST00000601291 TMC1Q8TDI8 760 aa31■■■□□ 2.55
IRF3-228ENST00000601291 SLC12A5Q9H2X9 1139 aa30.93■■■□□ 2.54
IRF3-228ENST00000601291 PER1O15534 1290 aaPredicted RBP30.92■■■□□ 2.54
IRF3-228ENST00000601291 DMRT2Q9Y5R5 561 aa30.92■■■□□ 2.54
IRF3-228ENST00000601291 KNSTRNQ9Y448 316 aa30.91■■■□□ 2.54
IRF3-228ENST00000601291 NALCNQ8IZF0 1738 aa30.9■■■□□ 2.54
IRF3-228ENST00000601291 ANKRD36BQ8N2N9 1353 aa30.9■■■□□ 2.54
IRF3-228ENST00000601291 ADGRL3Q9HAR2 1447 aa30.89■■■□□ 2.54
IRF3-228ENST00000601291 ATP7BP35670 1465 aa30.89■■■□□ 2.54
IRF3-228ENST00000601291 CDC42BPGQ6DT37 1551 aa30.89■■■□□ 2.53
IRF3-228ENST00000601291 PROSER2Q86WR7 435 aaPredicted RBP30.88■■■□□ 2.53
IRF3-228ENST00000601291 NUDT16Q96DE0 195 aaKnown RBP30.88■■■□□ 2.53
IRF3-228ENST00000601291 PRKRIP1Q9H875 184 aaPredicted RBP30.88■■■□□ 2.53
IRF3-228ENST00000601291 TERF2IPQ9NYB0 399 aa30.87■■■□□ 2.53
IRF3-228ENST00000601291 PPIP5K1Q6PFW1 1433 aa30.86■■■□□ 2.53
IRF3-228ENST00000601291 C14orf37Q86TY3 774 aa30.85■■■□□ 2.53
IRF3-228ENST00000601291 CCDC61Q9Y6R9 512 aa30.85■■■□□ 2.53
IRF3-228ENST00000601291 STRCP1A6NGW2 1772 aa30.85■■■□□ 2.53
IRF3-228ENST00000601291 KTN1Q86UP2 1357 aaKnown RBP30.84■■■□□ 2.53
IRF3-228ENST00000601291 CABP1Q9NZU7 370 aa30.84■■■□□ 2.53
IRF3-228ENST00000601291 HDGFL2Q7Z4V5 671 aaPredicted RBP30.83■■■□□ 2.53
IRF3-228ENST00000601291 PRR36Q9H6K5 1346 aa30.82■■■□□ 2.52
IRF3-228ENST00000601291 A0A1W2PP64 1363 aa30.82■■■□□ 2.52
IRF3-228ENST00000601291 FMN2Q9NZ56 1722 aa30.82■■■□□ 2.52
IRF3-228ENST00000601291 ANKARQ7Z5J8 1434 aa30.82■■■□□ 2.52
IRF3-228ENST00000601291 NSD3Q9BZ95 1437 aa30.82■■■□□ 2.52
IRF3-228ENST00000601291 RBM33Q96EV2 1170 aaKnown RBP30.82■■■□□ 2.52
IRF3-228ENST00000601291 TOPAZ1Q8N9V7 1692 aa30.82■■■□□ 2.52
IRF3-228ENST00000601291 NCOA3Q9Y6Q9 1424 aa30.81■■■□□ 2.52
IRF3-228ENST00000601291 CARD14Q9BXL6 1004 aa30.8■■■□□ 2.52
IRF3-228ENST00000601291 ITSN1Q15811 1721 aa30.8■■■□□ 2.52
IRF3-228ENST00000601291 CD163L1Q9NR16 1453 aa30.8■■■□□ 2.52
IRF3-228ENST00000601291 CNGB1Q14028 1251 aaPredicted RBP30.79■■■□□ 2.52
IRF3-228ENST00000601291 NPC1L1Q9UHC9 1359 aa30.79■■■□□ 2.52
IRF3-228ENST00000601291 USP32Q8NFA0 1604 aa30.79■■■□□ 2.52
IRF3-228ENST00000601291 CCER2I3L3R5 266 aa30.79■■■□□ 2.52
IRF3-228ENST00000601291 RALBP1Q15311 655 aa30.79■■■□□ 2.52
IRF3-228ENST00000601291 TMEM94Q12767 1356 aa30.78■■■□□ 2.52
IRF3-228ENST00000601291 NUTM2FA1L443 756 aa30.77■■■□□ 2.52
IRF3-228ENST00000601291 AMER1Q5JTC6 1135 aaPredicted RBP30.77■■■□□ 2.52
IRF3-228ENST00000601291 CC2D1BQ5T0F9 858 aaKnown RBP30.76■■■□□ 2.52
IRF3-228ENST00000601291 PARD3Q8TEW0 1356 aa30.75■■■□□ 2.51
IRF3-228ENST00000601291 ZNF335Q9H4Z2 1342 aaPredicted RBP30.75■■■□□ 2.51
IRF3-228ENST00000601291 CPSF1Q10570 1443 aaKnown RBP30.73■■■□□ 2.51
IRF3-228ENST00000601291 CGNL1Q0VF96 1302 aa30.73■■■□□ 2.51
IRF3-228ENST00000601291 C19orf44Q9H6X5 657 aa30.73■■■□□ 2.51
IRF3-228ENST00000601291 PLEKHG3A1L390 1219 aa30.72■■■□□ 2.51
IRF3-228ENST00000601291 DCCP43146 1447 aa30.7■■■□□ 2.51
IRF3-228ENST00000601291 ZNF692Q9BU19 519 aaPredicted RBP30.69■■■□□ 2.5
IRF3-228ENST00000601291 LRRC7Q96NW7 1537 aa30.69■■■□□ 2.5
IRF3-228ENST00000601291 NSD2O96028 1365 aa30.69■■■□□ 2.5
IRF3-228ENST00000601291 MYBBP1AQ9BQG0 1328 aaKnown RBP30.68■■■□□ 2.5
IRF3-228ENST00000601291 AEBP2Q6ZN18 517 aaPredicted RBP30.68■■■□□ 2.5
IRF3-228ENST00000601291 AKAP12Q02952 1782 aa30.68■■■□□ 2.5
IRF3-228ENST00000601291 EDC4Q6P2E9 1401 aaKnown RBP30.67■■■□□ 2.5
IRF3-228ENST00000601291 MON2Q7Z3U7 1717 aa30.67■■■□□ 2.5
IRF3-228ENST00000601291 RGPD8O14715 1765 aaPredicted RBP30.66■■■□□ 2.5
IRF3-228ENST00000601291 MSH6P52701 1360 aa30.66■■■□□ 2.5
IRF3-228ENST00000601291 ACEP12821 1306 aa30.65■■■□□ 2.5
IRF3-228ENST00000601291 ATF3P18847 181 aa30.64■■■□□ 2.5
IRF3-228ENST00000601291 POLR3AO14802 1390 aaPredicted RBP30.63■■■□□ 2.49
IRF3-228ENST00000601291 NGDNQ8NEJ9 315 aaKnown RBP30.62■■■□□ 2.49
IRF3-228ENST00000601291 XIRP1Q702N8 1843 aaKnown RBP30.61■■■□□ 2.49
IRF3-228ENST00000601291 PMFBP1Q8TBY8 1022 aa30.61■■■□□ 2.49
IRF3-228ENST00000601291 CADPS2Q86UW7 1296 aa30.6■■■□□ 2.49
IRF3-228ENST00000601291 USP6P35125 1406 aa30.59■■■□□ 2.49
IRF3-228ENST00000601291 KIF20BQ96Q89 1820 aa30.59■■■□□ 2.49
IRF3-228ENST00000601291 NLRP13Q86W25 1043 aa30.58■■■□□ 2.49
IRF3-228ENST00000601291 PHF8Q9UPP1 1060 aa30.58■■■□□ 2.49
IRF3-228ENST00000601291 MORC1Q86VD1 984 aa30.58■■■□□ 2.49
IRF3-228ENST00000601291 NRKQ7Z2Y5 1582 aa30.57■■■□□ 2.48
IRF3-228ENST00000601291 ESCO1Q5FWF5 840 aa30.57■■■□□ 2.48
IRF3-228ENST00000601291 MRS2Q9HD23 443 aa30.57■■■□□ 2.48
IRF3-228ENST00000601291 C1orf167Q5SNV9 1468 aa30.57■■■□□ 2.48
IRF3-228ENST00000601291 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.56■■■□□ 2.48
IRF3-228ENST00000601291 BRD4O60885 1362 aaPredicted RBP30.56■■■□□ 2.48
IRF3-228ENST00000601291 MST1RQ04912 1400 aa30.56■■■□□ 2.48
IRF3-228ENST00000601291 ANKRD26Q9UPS8 1709 aa30.55■■■□□ 2.48
IRF3-228ENST00000601291 FYB1O15117 783 aa30.54■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms