RNA–Protein interactions for RNA: ENST00000601253.5

SNRPA-209, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 519 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-209ENST00000601253 NBPF1Q3BBV0 1214 aa19.76■□□□□ 0.75
SNRPA-209ENST00000601253 PRAM1Q96QH2 718 aa19.76■□□□□ 0.75
SNRPA-209ENST00000601253 TRPM1Q7Z4N2 1603 aa19.76■□□□□ 0.75
SNRPA-209ENST00000601253 CDC42BPGQ6DT37 1551 aa19.75■□□□□ 0.75
SNRPA-209ENST00000601253 POGKQ9P215 609 aa19.75■□□□□ 0.75
SNRPA-209ENST00000601253 NBPF8Q3BBV2 869 aa19.74■□□□□ 0.75
SNRPA-209ENST00000601253 ROCK2O75116 1388 aaKnown RBP19.73■□□□□ 0.75
SNRPA-209ENST00000601253 GPRASP1Q5JY77 1395 aa19.72■□□□□ 0.75
SNRPA-209ENST00000601253 MST1RQ04912 1400 aa19.72■□□□□ 0.75
SNRPA-209ENST00000601253 RALGAPBQ86X10 1494 aa19.72■□□□□ 0.75
SNRPA-209ENST00000601253 ARHGEF28Q8N1W1 1705 aaKnown RBP19.7■□□□□ 0.74
SNRPA-209ENST00000601253 ROBO1Q9Y6N7 1651 aa19.68■□□□□ 0.74
SNRPA-209ENST00000601253 SAFB2Q14151 953 aaKnown RBP eCLIP19.68■□□□□ 0.74
SNRPA-209ENST00000601253 ADGRB2O60241 1585 aa19.68■□□□□ 0.74
SNRPA-209ENST00000601253 C1orf167Q5SNV9 1468 aa19.67■□□□□ 0.74
SNRPA-209ENST00000601253 EIF3AQ14152 1382 aaKnown RBP19.66■□□□□ 0.74
SNRPA-209ENST00000601253 HSPA1LP34931 641 aa19.65■□□□□ 0.74
SNRPA-209ENST00000601253 BRINP3Q76B58 766 aa19.65■□□□□ 0.74
SNRPA-209ENST00000601253 CENPJQ9HC77 1338 aaPredicted RBP19.65■□□□□ 0.74
SNRPA-209ENST00000601253 CARD11Q9BXL7 1154 aa19.64■□□□□ 0.73
SNRPA-209ENST00000601253 MINK1Q8N4C8 1332 aaPredicted RBP19.64■□□□□ 0.73
SNRPA-209ENST00000601253 FMN2Q9NZ56 1722 aa19.62■□□□□ 0.73
SNRPA-209ENST00000601253 ANKARQ7Z5J8 1434 aa19.61■□□□□ 0.73
SNRPA-209ENST00000601253 WASLO00401 505 aaPredicted RBP19.61■□□□□ 0.73
SNRPA-209ENST00000601253 HIRIP3Q9BW71 556 aaPredicted RBP19.6■□□□□ 0.73
SNRPA-209ENST00000601253 AHDC1Q5TGY3 1603 aaPredicted RBP19.6■□□□□ 0.73
SNRPA-209ENST00000601253 ESCO1Q5FWF5 840 aa19.58■□□□□ 0.72
SNRPA-209ENST00000601253 ORAI2Q96SN7 254 aa19.58■□□□□ 0.72
SNRPA-209ENST00000601253 TULP4Q9NRJ4 1543 aa19.57■□□□□ 0.72
SNRPA-209ENST00000601253 SBNO2Q9Y2G9 1366 aa19.57■□□□□ 0.72
SNRPA-209ENST00000601253 QRICH2Q9H0J4 1663 aa19.56■□□□□ 0.72
SNRPA-209ENST00000601253 NUTM2FA1L443 756 aa19.56■□□□□ 0.72
SNRPA-209ENST00000601253 PHLPP1O60346 1717 aa19.55■□□□□ 0.72
SNRPA-209ENST00000601253 NHSL1Q5SYE7 1610 aa19.54■□□□□ 0.72
SNRPA-209ENST00000601253 CDK19Q9BWU1 502 aa19.54■□□□□ 0.72
SNRPA-209ENST00000601253 NPHP3Q7Z494 1330 aa19.53■□□□□ 0.72
SNRPA-209ENST00000601253 KIF1AQ12756 1690 aa19.53■□□□□ 0.72
SNRPA-209ENST00000601253 COL16A1Q07092 1604 aaPredicted RBP19.53■□□□□ 0.72
SNRPA-209ENST00000601253 USP32Q8NFA0 1604 aa19.53■□□□□ 0.72
SNRPA-209ENST00000601253 PHF8Q9UPP1 1060 aa19.52■□□□□ 0.72
SNRPA-209ENST00000601253 EVC2Q86UK5 1308 aa19.51■□□□□ 0.71
SNRPA-209ENST00000601253 PRR36Q9H6K5 1346 aa19.51■□□□□ 0.71
SNRPA-209ENST00000601253 ATP7BP35670 1465 aa19.51■□□□□ 0.71
SNRPA-209ENST00000601253 USP47Q96K76 1375 aa19.5■□□□□ 0.71
SNRPA-209ENST00000601253 SLC24A1O60721 1099 aa19.5■□□□□ 0.71
SNRPA-209ENST00000601253 NUDT16Q96DE0 195 aaKnown RBP19.5■□□□□ 0.71
SNRPA-209ENST00000601253 SOS2Q07890 1332 aaPredicted RBP19.5■□□□□ 0.71
SNRPA-209ENST00000601253 JCADQ9P266 1359 aa19.49■□□□□ 0.71
SNRPA-209ENST00000601253 FOXO3O43524 673 aa19.49■□□□□ 0.71
SNRPA-209ENST00000601253 SRPK2P78362 688 aaKnown RBP19.49■□□□□ 0.71
SNRPA-209ENST00000601253 LRRC59Q96AG4 307 aaKnown RBP19.49■□□□□ 0.71
SNRPA-209ENST00000601253 DDX17Q92841 729 aaKnown RBP19.48■□□□□ 0.71
SNRPA-209ENST00000601253 CCDC61Q9Y6R9 512 aa19.48■□□□□ 0.71
SNRPA-209ENST00000601253 PXDNQ92626 1479 aa19.47■□□□□ 0.71
SNRPA-209ENST00000601253 ITSN1Q15811 1721 aa19.46■□□□□ 0.71
SNRPA-209ENST00000601253 ST20-MTHFSA0A0A6YYL1 179 aa19.46■□□□□ 0.71
SNRPA-209ENST00000601253 RGPD8O14715 1765 aaPredicted RBP19.46■□□□□ 0.71
SNRPA-209ENST00000601253 CABP2Q9NPB3 220 aa19.45■□□□□ 0.7
SNRPA-209ENST00000601253 TOPAZ1Q8N9V7 1692 aa19.44■□□□□ 0.7
SNRPA-209ENST00000601253 PLEKHG3A1L390 1219 aa19.44■□□□□ 0.7
SNRPA-209ENST00000601253 PMFBP1Q8TBY8 1022 aa19.44■□□□□ 0.7
SNRPA-209ENST00000601253 TESK2Q96S53 571 aa19.44■□□□□ 0.7
SNRPA-209ENST00000601253 PSME1Q06323 249 aa19.43■□□□□ 0.7
SNRPA-209ENST00000601253 PUS7Q96PZ0 661 aaKnown RBP19.43■□□□□ 0.7
SNRPA-209ENST00000601253 SPATA31A6Q5VVP1 1343 aa19.43■□□□□ 0.7
SNRPA-209ENST00000601253 ATAD2Q6PL18 1390 aa19.43■□□□□ 0.7
SNRPA-209ENST00000601253 SHPRHQ149N8 1683 aa19.43■□□□□ 0.7
SNRPA-209ENST00000601253 KRT28Q7Z3Y7 464 aa19.42■□□□□ 0.7
SNRPA-209ENST00000601253 NGDNQ8NEJ9 315 aaKnown RBP19.42■□□□□ 0.7
SNRPA-209ENST00000601253 PPIP5K1Q6PFW1 1433 aa19.42■□□□□ 0.7
SNRPA-209ENST00000601253 SBNO1A3KN83 1393 aa19.41■□□□□ 0.7
SNRPA-209ENST00000601253 POLR3AO14802 1390 aaPredicted RBP19.41■□□□□ 0.7
SNRPA-209ENST00000601253 PNPLA6Q8IY17 1366 aa19.41■□□□□ 0.7
SNRPA-209ENST00000601253 XPCQ01831 940 aaPredicted RBP19.4■□□□□ 0.7
SNRPA-209ENST00000601253 EIF4G2P78344 907 aaKnown RBP eCLIP19.39■□□□□ 0.69
SNRPA-209ENST00000601253 SPATA31A3Q5VYP0 1347 aa19.39■□□□□ 0.69
SNRPA-209ENST00000601253 ACEP12821 1306 aa19.38■□□□□ 0.69
SNRPA-209ENST00000601253 TMF1P82094 1093 aa19.38■□□□□ 0.69
SNRPA-209ENST00000601253 TNS3Q68CZ2 1445 aa19.37■□□□□ 0.69
SNRPA-209ENST00000601253 CABP1Q9NZU7 370 aa19.37■□□□□ 0.69
SNRPA-209ENST00000601253 MED1Q15648 1581 aaPredicted RBP19.36■□□□□ 0.69
SNRPA-209ENST00000601253 CDCA8Q53HL2 280 aa19.36■□□□□ 0.69
SNRPA-209ENST00000601253 ARHGEF10O15013 1369 aa19.35■□□□□ 0.69
SNRPA-209ENST00000601253 BRD4O60885 1362 aaPredicted RBP19.35■□□□□ 0.69
SNRPA-209ENST00000601253 COL22A1Q8NFW1 1626 aaPredicted RBP19.35■□□□□ 0.69
SNRPA-209ENST00000601253 DISP3Q9P2K9 1392 aa19.33■□□□□ 0.69
SNRPA-209ENST00000601253 NINLQ9Y2I6 1382 aa19.33■□□□□ 0.69
SNRPA-209ENST00000601253 TRPM3Q9HCF6 1732 aaPredicted RBP19.33■□□□□ 0.68
SNRPA-209ENST00000601253 HSPA5P11021 654 aaKnown RBP19.32■□□□□ 0.68
SNRPA-209ENST00000601253 ZNF692Q9BU19 519 aaPredicted RBP19.32■□□□□ 0.68
SNRPA-209ENST00000601253 LRP6O75581 1613 aa19.31■□□□□ 0.68
SNRPA-209ENST00000601253 USP6P35125 1406 aa19.3■□□□□ 0.68
SNRPA-209ENST00000601253 CPSF1Q10570 1443 aaKnown RBP19.29■□□□□ 0.68
SNRPA-209ENST00000601253 PAK3O75914 559 aaPredicted RBP19.29■□□□□ 0.68
SNRPA-209ENST00000601253 ALS2Q96Q42 1657 aa19.28■□□□□ 0.68
SNRPA-209ENST00000601253 NUTM2BA6NNL0 878 aaPredicted RBP19.28■□□□□ 0.68
SNRPA-209ENST00000601253 NUTM2EB1AL46 878 aaPredicted RBP19.28■□□□□ 0.68
SNRPA-209ENST00000601253 LMOD2Q6P5Q4 547 aa19.28■□□□□ 0.68
SNRPA-209ENST00000601253 NUTM2AQ8IVF1 878 aaPredicted RBP19.28■□□□□ 0.68
SNRPA-209ENST00000601253 TMC1Q8TDI8 760 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms