RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 CDK12Q9NYV4 1490 aaPredicted RBP26.85■■□□□ 1.89
CHMP2A-208ENST00000601220 ABCC11Q96J66 1382 aa26.84■■□□□ 1.89
CHMP2A-208ENST00000601220 WAPLQ7Z5K2 1190 aa26.84■■□□□ 1.89
CHMP2A-208ENST00000601220 PIK3C2GO75747 1445 aa26.83■■□□□ 1.89
CHMP2A-208ENST00000601220 TMEM132EQ6IEE7 984 aa26.83■■□□□ 1.89
CHMP2A-208ENST00000601220 STK26Q9P289 416 aa26.83■■□□□ 1.89
CHMP2A-208ENST00000601220 CDC42BPGQ6DT37 1551 aa26.82■■□□□ 1.88
CHMP2A-208ENST00000601220 IFT172Q9UG01 1749 aa26.82■■□□□ 1.88
CHMP2A-208ENST00000601220 QTRT2Q9H974 415 aaKnown RBP26.81■■□□□ 1.88
CHMP2A-208ENST00000601220 ADAMTS2O95450 1211 aa26.8■■□□□ 1.88
CHMP2A-208ENST00000601220 PLEKHH1Q9ULM0 1364 aa26.8■■□□□ 1.88
CHMP2A-208ENST00000601220 ESCO1Q5FWF5 840 aa26.79■■□□□ 1.88
CHMP2A-208ENST00000601220 ACIN1Q9UKV3 1341 aaKnown RBP26.78■■□□□ 1.88
CHMP2A-208ENST00000601220 RBM6P78332 1123 aaKnown RBP26.77■■□□□ 1.88
CHMP2A-208ENST00000601220 NGLY1Q96IV0 654 aa26.77■■□□□ 1.88
CHMP2A-208ENST00000601220 C14orf93Q9H972 538 aaKnown RBP26.77■■□□□ 1.88
CHMP2A-208ENST00000601220 PXDNQ92626 1479 aa26.75■■□□□ 1.87
CHMP2A-208ENST00000601220 YTHDC2Q9H6S0 1430 aaKnown RBP26.75■■□□□ 1.87
CHMP2A-208ENST00000601220 NPHP3Q7Z494 1330 aa26.75■■□□□ 1.87
CHMP2A-208ENST00000601220 SIRT1Q96EB6 747 aa26.75■■□□□ 1.87
CHMP2A-208ENST00000601220 NRXN1Q9ULB1 1477 aa26.74■■□□□ 1.87
CHMP2A-208ENST00000601220 FOXO3O43524 673 aa26.74■■□□□ 1.87
CHMP2A-208ENST00000601220 FNBP4Q8N3X1 1017 aaPredicted RBP26.74■■□□□ 1.87
CHMP2A-208ENST00000601220 RGS12O14924 1447 aa26.73■■□□□ 1.87
CHMP2A-208ENST00000601220 COL22A1Q8NFW1 1626 aaPredicted RBP26.72■■□□□ 1.87
CHMP2A-208ENST00000601220 MYOM2P54296 1465 aa26.72■■□□□ 1.87
CHMP2A-208ENST00000601220 NUTM2FA1L443 756 aa26.71■■□□□ 1.87
CHMP2A-208ENST00000601220 KNDC1Q76NI1 1749 aa26.7■■□□□ 1.87
CHMP2A-208ENST00000601220 XPCQ01831 940 aaPredicted RBP26.7■■□□□ 1.86
CHMP2A-208ENST00000601220 CFAP70Q5T0N1 1121 aa26.7■■□□□ 1.86
CHMP2A-208ENST00000601220 RAB3GAP2Q9H2M9 1393 aa26.7■■□□□ 1.86
CHMP2A-208ENST00000601220 USP21Q9UK80 565 aa26.69■■□□□ 1.86
CHMP2A-208ENST00000601220 TRPC5Q9UL62 973 aaPredicted RBP26.65■■□□□ 1.86
CHMP2A-208ENST00000601220 ATRNO75882 1429 aa26.64■■□□□ 1.85
CHMP2A-208ENST00000601220 DHX57Q6P158 1386 aaKnown RBP26.63■■□□□ 1.85
CHMP2A-208ENST00000601220 FMN2Q9NZ56 1722 aa26.63■■□□□ 1.85
CHMP2A-208ENST00000601220 BCL9LQ86UU0 1499 aa26.62■■□□□ 1.85
CHMP2A-208ENST00000601220 SPATA31A3Q5VYP0 1347 aa26.62■■□□□ 1.85
CHMP2A-208ENST00000601220 PRAM1Q96QH2 718 aa26.59■■□□□ 1.85
CHMP2A-208ENST00000601220 KRT28Q7Z3Y7 464 aa26.58■■□□□ 1.85
CHMP2A-208ENST00000601220 PHF8Q9UPP1 1060 aa26.56■■□□□ 1.84
CHMP2A-208ENST00000601220 DLC1Q96QB1 1528 aa26.55■■□□□ 1.84
CHMP2A-208ENST00000601220 ADGRB1O14514 1584 aa26.55■■□□□ 1.84
CHMP2A-208ENST00000601220 SAFB2Q14151 953 aaKnown RBP eCLIP26.55■■□□□ 1.84
CHMP2A-208ENST00000601220 KIF1AQ12756 1690 aa26.54■■□□□ 1.84
CHMP2A-208ENST00000601220 HRCP23327 699 aa26.53■■□□□ 1.84
CHMP2A-208ENST00000601220 SLIT2O94813 1529 aa26.5■■□□□ 1.83
CHMP2A-208ENST00000601220 ATAD2Q6PL18 1390 aa26.5■■□□□ 1.83
CHMP2A-208ENST00000601220 GJD4Q96KN9 370 aaPredicted RBP26.5■■□□□ 1.83
CHMP2A-208ENST00000601220 POGKQ9P215 609 aa26.5■■□□□ 1.83
CHMP2A-208ENST00000601220 MARF1Q9Y4F3 1742 aaKnown RBP26.5■■□□□ 1.83
CHMP2A-208ENST00000601220 PSME1Q06323 249 aa26.49■■□□□ 1.83
CHMP2A-208ENST00000601220 TNS3Q68CZ2 1445 aa26.48■■□□□ 1.83
CHMP2A-208ENST00000601220 SBNO1A3KN83 1393 aa26.48■■□□□ 1.83
CHMP2A-208ENST00000601220 UNC5CLQ8IV45 518 aa26.48■■□□□ 1.83
CHMP2A-208ENST00000601220 DCAF11Q8TEB1 546 aa26.48■■□□□ 1.83
CHMP2A-208ENST00000601220 KDM2AQ9Y2K7 1162 aa26.48■■□□□ 1.83
CHMP2A-208ENST00000601220 TRAK1Q9UPV9 953 aa26.47■■□□□ 1.83
CHMP2A-208ENST00000601220 RGPD8O14715 1765 aaPredicted RBP26.47■■□□□ 1.83
CHMP2A-208ENST00000601220 ANKARQ7Z5J8 1434 aa26.47■■□□□ 1.83
CHMP2A-208ENST00000601220 CABLES1Q8TDN4 633 aa26.46■■□□□ 1.83
CHMP2A-208ENST00000601220 USP32Q8NFA0 1604 aa26.46■■□□□ 1.83
CHMP2A-208ENST00000601220 STAC3Q96MF2 364 aa26.45■■□□□ 1.82
CHMP2A-208ENST00000601220 ADGRB2O60241 1585 aa26.45■■□□□ 1.82
CHMP2A-208ENST00000601220 PMFBP1Q8TBY8 1022 aa26.44■■□□□ 1.82
CHMP2A-208ENST00000601220 HIRIP3Q9BW71 556 aaPredicted RBP26.43■■□□□ 1.82
CHMP2A-208ENST00000601220 PRR36Q9H6K5 1346 aa26.42■■□□□ 1.82
CHMP2A-208ENST00000601220 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.42■■□□□ 1.82
CHMP2A-208ENST00000601220 RALGAPBQ86X10 1494 aa26.42■■□□□ 1.82
CHMP2A-208ENST00000601220 GLI3P10071 1580 aa26.41■■□□□ 1.82
CHMP2A-208ENST00000601220 MINK1Q8N4C8 1332 aaPredicted RBP26.4■■□□□ 1.82
CHMP2A-208ENST00000601220 ARHGEF10O15013 1369 aa26.4■■□□□ 1.82
CHMP2A-208ENST00000601220 WASLO00401 505 aaPredicted RBP26.38■■□□□ 1.81
CHMP2A-208ENST00000601220 FAM83GA6ND36 823 aa26.36■■□□□ 1.81
CHMP2A-208ENST00000601220 VPS72Q15906 364 aa26.36■■□□□ 1.81
CHMP2A-208ENST00000601220 LMOD2Q6P5Q4 547 aa26.36■■□□□ 1.81
CHMP2A-208ENST00000601220 PLEKHG5O94827 1062 aa26.35■■□□□ 1.81
CHMP2A-208ENST00000601220 HAP1P54257 671 aaPredicted RBP26.35■■□□□ 1.81
CHMP2A-208ENST00000601220 TULP4Q9NRJ4 1543 aa26.34■■□□□ 1.81
CHMP2A-208ENST00000601220 ONECUT3O60422 494 aaPredicted RBP26.34■■□□□ 1.81
CHMP2A-208ENST00000601220 CCDC125Q86Z20 511 aa26.34■■□□□ 1.81
CHMP2A-208ENST00000601220 EP400Q96L91 3159 aa26.33■■□□□ 1.81
CHMP2A-208ENST00000601220 EIF3AQ14152 1382 aaKnown RBP26.33■■□□□ 1.8
CHMP2A-208ENST00000601220 TRPM3Q9HCF6 1732 aaPredicted RBP26.32■■□□□ 1.8
CHMP2A-208ENST00000601220 ABCA3Q99758 1704 aa26.31■■□□□ 1.8
CHMP2A-208ENST00000601220 SEPT12Q8IYM1 358 aa26.3■■□□□ 1.8
CHMP2A-208ENST00000601220 GPRASP1Q5JY77 1395 aa26.3■■□□□ 1.8
CHMP2A-208ENST00000601220 PLCH1Q4KWH8 1693 aa26.27■■□□□ 1.8
CHMP2A-208ENST00000601220 ALS2Q96Q42 1657 aa26.27■■□□□ 1.8
CHMP2A-208ENST00000601220 NWD2Q9ULI1 1742 aa26.27■■□□□ 1.8
CHMP2A-208ENST00000601220 NUDT16Q96DE0 195 aaKnown RBP26.26■■□□□ 1.79
CHMP2A-208ENST00000601220 ATP7BP35670 1465 aa26.25■■□□□ 1.79
CHMP2A-208ENST00000601220 NGDNQ8NEJ9 315 aaKnown RBP26.25■■□□□ 1.79
CHMP2A-208ENST00000601220 ARHGEF28Q8N1W1 1705 aaKnown RBP26.25■■□□□ 1.79
CHMP2A-208ENST00000601220 BTG4Q9NY30 223 aa26.23■■□□□ 1.79
CHMP2A-208ENST00000601220 BLMP54132 1417 aaPredicted RBP26.22■■□□□ 1.79
CHMP2A-208ENST00000601220 CDK19Q9BWU1 502 aa26.22■■□□□ 1.79
CHMP2A-208ENST00000601220 CCDC9Q9Y3X0 531 aaKnown RBP26.22■■□□□ 1.79
CHMP2A-208ENST00000601220 NBPF1Q3BBV0 1214 aa26.21■■□□□ 1.79
CHMP2A-208ENST00000601220 ZRANB1Q9UGI0 708 aa26.21■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms