RNA–Protein interactions for RNA: ENST00000601194.1

PSMC4-205, Transcript of proteasome 26S subunit, ATPase 4, humanhuman

TSL 3

Gene PSMC4, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC4-205ENST00000601194 PRAM1Q96QH2 718 aa20.6■□□□□ 0.89
PSMC4-205ENST00000601194 C1orf167Q5SNV9 1468 aa20.6■□□□□ 0.89
PSMC4-205ENST00000601194 TRAK1Q9UPV9 953 aa20.59■□□□□ 0.89
PSMC4-205ENST00000601194 AHDC1Q5TGY3 1603 aaPredicted RBP20.58■□□□□ 0.89
PSMC4-205ENST00000601194 NBPF1Q3BBV0 1214 aa20.56■□□□□ 0.88
PSMC4-205ENST00000601194 POGKQ9P215 609 aa20.56■□□□□ 0.88
PSMC4-205ENST00000601194 PHLPP1O60346 1717 aa20.56■□□□□ 0.88
PSMC4-205ENST00000601194 SAFB2Q14151 953 aaKnown RBP eCLIP20.55■□□□□ 0.88
PSMC4-205ENST00000601194 COL16A1Q07092 1604 aaPredicted RBP20.55■□□□□ 0.88
PSMC4-205ENST00000601194 TONSLQ96HA7 1378 aa20.55■□□□□ 0.88
PSMC4-205ENST00000601194 ARHGEF28Q8N1W1 1705 aaKnown RBP20.53■□□□□ 0.88
PSMC4-205ENST00000601194 ADGRB2O60241 1585 aa20.52■□□□□ 0.88
PSMC4-205ENST00000601194 ORAI2Q96SN7 254 aa20.52■□□□□ 0.88
PSMC4-205ENST00000601194 FMN2Q9NZ56 1722 aa20.52■□□□□ 0.88
PSMC4-205ENST00000601194 NHSL1Q5SYE7 1610 aa20.52■□□□□ 0.88
PSMC4-205ENST00000601194 TRPM1Q7Z4N2 1603 aa20.52■□□□□ 0.88
PSMC4-205ENST00000601194 NUTM2FA1L443 756 aa20.49■□□□□ 0.87
PSMC4-205ENST00000601194 NBPF8Q3BBV2 869 aa20.49■□□□□ 0.87
PSMC4-205ENST00000601194 CLSPNQ9HAW4 1339 aa20.49■□□□□ 0.87
PSMC4-205ENST00000601194 MED1Q15648 1581 aaPredicted RBP20.48■□□□□ 0.87
PSMC4-205ENST00000601194 DDX17Q92841 729 aaKnown RBP20.48■□□□□ 0.87
PSMC4-205ENST00000601194 MINK1Q8N4C8 1332 aaPredicted RBP20.48■□□□□ 0.87
PSMC4-205ENST00000601194 JCADQ9P266 1359 aa20.47■□□□□ 0.87
PSMC4-205ENST00000601194 ESCO1Q5FWF5 840 aa20.47■□□□□ 0.87
PSMC4-205ENST00000601194 HIRIP3Q9BW71 556 aaPredicted RBP20.47■□□□□ 0.87
PSMC4-205ENST00000601194 ROCK2O75116 1388 aaKnown RBP20.46■□□□□ 0.87
PSMC4-205ENST00000601194 GPRASP1Q5JY77 1395 aa20.45■□□□□ 0.86
PSMC4-205ENST00000601194 DISP3Q9P2K9 1392 aa20.45■□□□□ 0.86
PSMC4-205ENST00000601194 ANKARQ7Z5J8 1434 aa20.44■□□□□ 0.86
PSMC4-205ENST00000601194 WASLO00401 505 aaPredicted RBP20.43■□□□□ 0.86
PSMC4-205ENST00000601194 SOS2Q07890 1332 aaPredicted RBP20.43■□□□□ 0.86
PSMC4-205ENST00000601194 RALGAPBQ86X10 1494 aa20.43■□□□□ 0.86
PSMC4-205ENST00000601194 USP32Q8NFA0 1604 aa20.42■□□□□ 0.86
PSMC4-205ENST00000601194 EIF3AQ14152 1382 aaKnown RBP20.42■□□□□ 0.86
PSMC4-205ENST00000601194 TULP4Q9NRJ4 1543 aa20.42■□□□□ 0.86
PSMC4-205ENST00000601194 NPHP3Q7Z494 1330 aa20.41■□□□□ 0.86
PSMC4-205ENST00000601194 CENPJQ9HC77 1338 aaPredicted RBP20.41■□□□□ 0.86
PSMC4-205ENST00000601194 SHPRHQ149N8 1683 aa20.41■□□□□ 0.86
PSMC4-205ENST00000601194 FOXO3O43524 673 aa20.4■□□□□ 0.86
PSMC4-205ENST00000601194 KIF1AQ12756 1690 aa20.4■□□□□ 0.86
PSMC4-205ENST00000601194 PXDNQ92626 1479 aa20.4■□□□□ 0.86
PSMC4-205ENST00000601194 LRRC59Q96AG4 307 aaKnown RBP20.4■□□□□ 0.86
PSMC4-205ENST00000601194 PRR36Q9H6K5 1346 aa20.39■□□□□ 0.85
PSMC4-205ENST00000601194 SPATA31A6Q5VVP1 1343 aa20.38■□□□□ 0.85
PSMC4-205ENST00000601194 PHF8Q9UPP1 1060 aa20.38■□□□□ 0.85
PSMC4-205ENST00000601194 RGPD8O14715 1765 aaPredicted RBP20.38■□□□□ 0.85
PSMC4-205ENST00000601194 PNPLA6Q8IY17 1366 aa20.37■□□□□ 0.85
PSMC4-205ENST00000601194 CCER1Q8TC90 406 aaPredicted RBP20.37■□□□□ 0.85
PSMC4-205ENST00000601194 ATP7BP35670 1465 aa20.37■□□□□ 0.85
PSMC4-205ENST00000601194 QRICH2Q9H0J4 1663 aa20.36■□□□□ 0.85
PSMC4-205ENST00000601194 LRP6O75581 1613 aa20.35■□□□□ 0.85
PSMC4-205ENST00000601194 XPCQ01831 940 aaPredicted RBP20.35■□□□□ 0.85
PSMC4-205ENST00000601194 CDK19Q9BWU1 502 aa20.35■□□□□ 0.85
PSMC4-205ENST00000601194 CARD11Q9BXL7 1154 aa20.35■□□□□ 0.85
PSMC4-205ENST00000601194 TIMELESSQ9UNS1 1208 aa20.35■□□□□ 0.85
PSMC4-205ENST00000601194 PMFBP1Q8TBY8 1022 aa20.32■□□□□ 0.84
PSMC4-205ENST00000601194 NUDT16Q96DE0 195 aaKnown RBP20.32■□□□□ 0.84
PSMC4-205ENST00000601194 PHF23Q9BUL5 403 aaPredicted RBP20.31■□□□□ 0.84
PSMC4-205ENST00000601194 KRT28Q7Z3Y7 464 aa20.3■□□□□ 0.84
PSMC4-205ENST00000601194 TOPAZ1Q8N9V7 1692 aa20.29■□□□□ 0.84
PSMC4-205ENST00000601194 SPATA31A3Q5VYP0 1347 aa20.28■□□□□ 0.84
PSMC4-205ENST00000601194 COL22A1Q8NFW1 1626 aaPredicted RBP20.28■□□□□ 0.84
PSMC4-205ENST00000601194 ITSN1Q15811 1721 aa20.28■□□□□ 0.84
PSMC4-205ENST00000601194 NUTM2BA6NNL0 878 aaPredicted RBP20.28■□□□□ 0.84
PSMC4-205ENST00000601194 NUTM2EB1AL46 878 aaPredicted RBP20.28■□□□□ 0.84
PSMC4-205ENST00000601194 NUTM2AQ8IVF1 878 aaPredicted RBP20.28■□□□□ 0.84
PSMC4-205ENST00000601194 SBNO2Q9Y2G9 1366 aa20.28■□□□□ 0.84
PSMC4-205ENST00000601194 SBNO1A3KN83 1393 aa20.27■□□□□ 0.84
PSMC4-205ENST00000601194 SRPK2P78362 688 aaKnown RBP20.27■□□□□ 0.84
PSMC4-205ENST00000601194 PSME1Q06323 249 aa20.27■□□□□ 0.84
PSMC4-205ENST00000601194 RGS17Q9UGC6 210 aaPredicted RBP20.27■□□□□ 0.84
PSMC4-205ENST00000601194 CCDC61Q9Y6R9 512 aa20.27■□□□□ 0.84
PSMC4-205ENST00000601194 TNS3Q68CZ2 1445 aa20.27■□□□□ 0.83
PSMC4-205ENST00000601194 EVC2Q86UK5 1308 aa20.27■□□□□ 0.83
PSMC4-205ENST00000601194 CABP2Q9NPB3 220 aa20.26■□□□□ 0.83
PSMC4-205ENST00000601194 NGDNQ8NEJ9 315 aaKnown RBP20.25■□□□□ 0.83
PSMC4-205ENST00000601194 POLR3AO14802 1390 aaPredicted RBP20.24■□□□□ 0.83
PSMC4-205ENST00000601194 MEX3CQ5U5Q3 659 aaKnown RBP20.24■□□□□ 0.83
PSMC4-205ENST00000601194 ILDR2Q71H61 639 aa20.24■□□□□ 0.83
PSMC4-205ENST00000601194 PLEKHG3A1L390 1219 aa20.23■□□□□ 0.83
PSMC4-205ENST00000601194 TRPM3Q9HCF6 1732 aaPredicted RBP20.23■□□□□ 0.83
PSMC4-205ENST00000601194 PPIP5K1Q6PFW1 1433 aa20.22■□□□□ 0.83
PSMC4-205ENST00000601194 ACEP12821 1306 aa20.21■□□□□ 0.83
PSMC4-205ENST00000601194 ARHGEF10O15013 1369 aa20.21■□□□□ 0.83
PSMC4-205ENST00000601194 ADAMTS2O95450 1211 aa20.19■□□□□ 0.82
PSMC4-205ENST00000601194 TESK2Q96S53 571 aa20.19■□□□□ 0.82
PSMC4-205ENST00000601194 USP47Q96K76 1375 aa20.19■□□□□ 0.82
PSMC4-205ENST00000601194 ST20-MTHFSA0A0A6YYL1 179 aa20.18■□□□□ 0.82
PSMC4-205ENST00000601194 ALS2Q96Q42 1657 aa20.18■□□□□ 0.82
PSMC4-205ENST00000601194 LMOD2Q6P5Q4 547 aa20.17■□□□□ 0.82
PSMC4-205ENST00000601194 C8orf37Q96NL8 207 aa20.17■□□□□ 0.82
PSMC4-205ENST00000601194 CABP1Q9NZU7 370 aa20.17■□□□□ 0.82
PSMC4-205ENST00000601194 ATAD2Q6PL18 1390 aa20.17■□□□□ 0.82
PSMC4-205ENST00000601194 POTEAQ6S8J7 498 aa20.16■□□□□ 0.82
PSMC4-205ENST00000601194 AFF2P51816 1311 aa20.14■□□□□ 0.81
PSMC4-205ENST00000601194 PAK3O75914 559 aaPredicted RBP20.14■□□□□ 0.81
PSMC4-205ENST00000601194 CABLES1Q8TDN4 633 aa20.14■□□□□ 0.81
PSMC4-205ENST00000601194 ZNF772Q68DY9 489 aaPredicted RBP20.13■□□□□ 0.81
PSMC4-205ENST00000601194 NGLY1Q96IV0 654 aa20.12■□□□□ 0.81
PSMC4-205ENST00000601194 ABCA3Q99758 1704 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms