RNA–Protein interactions for RNA: ENST00000601011.1

NOTCH3-206, Transcript of notch 3, humanhuman

TSL 5

Gene NOTCH3, Length 3,858 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-206ENST00000601011 EMILIN1Q9Y6C2 1016 aa16.2■□□□□ 0.18
NOTCH3-206ENST00000601011 AMPHP49418 695 aa16.2■□□□□ 0.18
NOTCH3-206ENST00000601011 NME9Q86XW9 330 aa16.2■□□□□ 0.18
NOTCH3-206ENST00000601011 ARID3AQ99856 593 aa16.2■□□□□ 0.18
NOTCH3-206ENST00000601011 NAP1L5Q96NT1 182 aaPredicted RBP16.19■□□□□ 0.18
NOTCH3-206ENST00000601011 CDC42BPAQ5VT25 1732 aa16.19■□□□□ 0.18
NOTCH3-206ENST00000601011 RUNDC1Q96C34 613 aa16.19■□□□□ 0.18
NOTCH3-206ENST00000601011 HAP1P54257 671 aaPredicted RBP16.19■□□□□ 0.18
NOTCH3-206ENST00000601011 MIS18AQ9NYP9 233 aa16.19■□□□□ 0.18
NOTCH3-206ENST00000601011 COG3Q96JB2 828 aa16.17■□□□□ 0.18
NOTCH3-206ENST00000601011 PARD3Q8TEW0 1356 aa16.17■□□□□ 0.18
NOTCH3-206ENST00000601011 SLFN5Q08AF3 891 aa16.16■□□□□ 0.18
NOTCH3-206ENST00000601011 C14orf93Q9H972 538 aaKnown RBP16.16■□□□□ 0.18
NOTCH3-206ENST00000601011 ZNF330Q9Y3S2 320 aaPredicted RBP16.16■□□□□ 0.18
NOTCH3-206ENST00000601011 LNPKQ9C0E8 428 aa16.15■□□□□ 0.18
NOTCH3-206ENST00000601011 RTF1Q92541 710 aaKnown RBP16.15■□□□□ 0.18
NOTCH3-206ENST00000601011 DUOX2Q9NRD8 1548 aa16.14■□□□□ 0.17
NOTCH3-206ENST00000601011 FAM83GA6ND36 823 aa16.14■□□□□ 0.17
NOTCH3-206ENST00000601011 NOL8Q76FK4 1167 aaKnown RBP16.14■□□□□ 0.17
NOTCH3-206ENST00000601011 EID1Q9Y6B2 187 aa16.14■□□□□ 0.17
NOTCH3-206ENST00000601011 SCAF11Q99590 1463 aaKnown RBP16.13■□□□□ 0.17
NOTCH3-206ENST00000601011 SHANK2Q9UPX8 1470 aa16.13■□□□□ 0.17
NOTCH3-206ENST00000601011 MAGI2Q86UL8 1455 aa16.12■□□□□ 0.17
NOTCH3-206ENST00000601011 ANKRD45Q5TZF3 282 aa16.12■□□□□ 0.17
NOTCH3-206ENST00000601011 NGEFQ8N5V2 710 aa16.12■□□□□ 0.17
NOTCH3-206ENST00000601011 IGHDP01880 384 aa16.12■□□□□ 0.17
NOTCH3-206ENST00000601011 NCLP19338 710 aaKnown RBP16.11■□□□□ 0.17
NOTCH3-206ENST00000601011 EIF2S2P20042 333 aaKnown RBP16.11■□□□□ 0.17
NOTCH3-206ENST00000601011 UHRF1BP1Q6BDS2 1440 aa16.11■□□□□ 0.17
NOTCH3-206ENST00000601011 CCDC9Q9Y3X0 531 aaKnown RBP16.11■□□□□ 0.17
NOTCH3-206ENST00000601011 YEATS2Q9ULM3 1422 aa16.11■□□□□ 0.17
NOTCH3-206ENST00000601011 HDGFP51858 240 aaKnown RBP16.1■□□□□ 0.17
NOTCH3-206ENST00000601011 ZKSCAN2Q63HK3 967 aa16.1■□□□□ 0.17
NOTCH3-206ENST00000601011 DDRGK1Q96HY6 314 aa16.1■□□□□ 0.17
NOTCH3-206ENST00000601011 RLBP1P12271 317 aa16.09■□□□□ 0.17
NOTCH3-206ENST00000601011 RWDD1Q9H446 243 aaPredicted RBP16.09■□□□□ 0.17
NOTCH3-206ENST00000601011 CENPQQ7L2Z9 268 aaPredicted RBP16.09■□□□□ 0.17
NOTCH3-206ENST00000601011 FYB1O15117 783 aa16.09■□□□□ 0.17
NOTCH3-206ENST00000601011 FOXD4L5Q5VV16 416 aaPredicted RBP16.09■□□□□ 0.17
NOTCH3-206ENST00000601011 SULT6B1Q6IMI4 303 aa16.09■□□□□ 0.17
NOTCH3-206ENST00000601011 FOXD4L4Q8WXT5 416 aaPredicted RBP16.09■□□□□ 0.17
NOTCH3-206ENST00000601011 SLC52A1Q9NWF4 448 aa16.09■□□□□ 0.17
NOTCH3-206ENST00000601011 DZIP1LQ8IYY4 767 aaKnown RBP16.08■□□□□ 0.17
NOTCH3-206ENST00000601011 NOB1Q9ULX3 412 aaKnown RBP16.08■□□□□ 0.17
NOTCH3-206ENST00000601011 NLRP6P59044 892 aa16.08■□□□□ 0.16
NOTCH3-206ENST00000601011 ATP10AO60312 1499 aa16.08■□□□□ 0.16
NOTCH3-206ENST00000601011 KDM5CP41229 1560 aa16.07■□□□□ 0.16
NOTCH3-206ENST00000601011 BECN1Q14457 450 aa16.06■□□□□ 0.16
NOTCH3-206ENST00000601011 KRT24Q2M2I5 525 aa16.06■□□□□ 0.16
NOTCH3-206ENST00000601011 FOXD4L6Q3SYB3 417 aaPredicted RBP16.06■□□□□ 0.16
NOTCH3-206ENST00000601011 FOXD4L3Q6VB84 417 aaPredicted RBP16.06■□□□□ 0.16
NOTCH3-206ENST00000601011 MCM10Q7L590 875 aa16.06■□□□□ 0.16
NOTCH3-206ENST00000601011 COL17A1Q9UMD9 1497 aaPredicted RBP16.06■□□□□ 0.16
NOTCH3-206ENST00000601011 CSB-PGBD3P0DP91 1061 aa16.06■□□□□ 0.16
NOTCH3-206ENST00000601011 CDC42BPBQ9Y5S2 1711 aa16.06■□□□□ 0.16
NOTCH3-206ENST00000601011 TMPOP42166 694 aaKnown RBP16.05■□□□□ 0.16
NOTCH3-206ENST00000601011 NUDT16Q96DE0 195 aaKnown RBP16.05■□□□□ 0.16
NOTCH3-206ENST00000601011 OS9Q13438 667 aaPredicted RBP16.05■□□□□ 0.16
NOTCH3-206ENST00000601011 FAM161AQ3B820 660 aa16.05■□□□□ 0.16
NOTCH3-206ENST00000601011 USHBP1Q8N6Y0 703 aa16.05■□□□□ 0.16
NOTCH3-206ENST00000601011 BACH2Q9BYV9 841 aa16.05■□□□□ 0.16
NOTCH3-206ENST00000601011 NPATQ14207 1427 aa16.04■□□□□ 0.16
NOTCH3-206ENST00000601011 SSH1Q8WYL5 1049 aa16.04■□□□□ 0.16
NOTCH3-206ENST00000601011 AEBP1Q8IUX7 1158 aa16.04■□□□□ 0.16
NOTCH3-206ENST00000601011 IPO8O15397 1037 aaKnown RBP16.04■□□□□ 0.16
NOTCH3-206ENST00000601011 PHACTR3Q96KR7 559 aa16.04■□□□□ 0.16
NOTCH3-206ENST00000601011 LRPPRCP42704 1394 aaKnown RBP16.04■□□□□ 0.16
NOTCH3-206ENST00000601011 ATP7AQ04656 1500 aa16.04■□□□□ 0.16
NOTCH3-206ENST00000601011 ADGBQ8N7X0 1667 aa16.03■□□□□ 0.16
NOTCH3-206ENST00000601011 RARSP54136 660 aaKnown RBP16.03■□□□□ 0.16
NOTCH3-206ENST00000601011 ZCCHC11Q5TAX3 1644 aaKnown RBP16.03■□□□□ 0.16
NOTCH3-206ENST00000601011 PDZRN3Q9UPQ7 1066 aa16.02■□□□□ 0.16
NOTCH3-206ENST00000601011 HSP90AB1P08238 724 aaKnown RBP16.02■□□□□ 0.16
NOTCH3-206ENST00000601011 PNNQ9H307 717 aaKnown RBP16.01■□□□□ 0.15
NOTCH3-206ENST00000601011 PCDHB15Q9Y5E8 787 aa16.01■□□□□ 0.15
NOTCH3-206ENST00000601011 GSE1Q14687 1217 aa16■□□□□ 0.15
NOTCH3-206ENST00000601011 ZNF518AQ6AHZ1 1483 aa16■□□□□ 0.15
NOTCH3-206ENST00000601011 RTEL1-TNFRSF6BF6WH68 1400 aa16■□□□□ 0.15
NOTCH3-206ENST00000601011 ABTB2Q8N961 1025 aa16■□□□□ 0.15
NOTCH3-206ENST00000601011 TMEM57Q8N5G2 664 aa15.99■□□□□ 0.15
NOTCH3-206ENST00000601011 STAC3Q96MF2 364 aa15.99■□□□□ 0.15
NOTCH3-206ENST00000601011 KDM5DQ9BY66 1539 aa15.99■□□□□ 0.15
NOTCH3-206ENST00000601011 USP35Q9P2H5 1018 aa15.99■□□□□ 0.15
NOTCH3-206ENST00000601011 PREX2Q70Z35 1606 aa15.99■□□□□ 0.15
NOTCH3-206ENST00000601011 HSP90AB2PQ58FF8 381 aa15.99■□□□□ 0.15
NOTCH3-206ENST00000601011 MAST1Q9Y2H9 1570 aa15.99■□□□□ 0.15
NOTCH3-206ENST00000601011 ESCO1Q5FWF5 840 aa15.98■□□□□ 0.15
NOTCH3-206ENST00000601011 MYO5CQ9NQX4 1742 aa15.98■□□□□ 0.15
NOTCH3-206ENST00000601011 A0A1W2PP64 1363 aa15.98■□□□□ 0.15
NOTCH3-206ENST00000601011 TSPYL6Q8N831 410 aa15.98■□□□□ 0.15
NOTCH3-206ENST00000601011 PSME1Q06323 249 aa15.98■□□□□ 0.15
NOTCH3-206ENST00000601011 NFKBIBQ15653 356 aa15.98■□□□□ 0.15
NOTCH3-206ENST00000601011 SEC24BO95487 1268 aa15.97■□□□□ 0.15
NOTCH3-206ENST00000601011 GPRASP1Q5JY77 1395 aa15.97■□□□□ 0.15
NOTCH3-206ENST00000601011 FRAT2O75474 233 aaPredicted RBP15.97■□□□□ 0.15
NOTCH3-206ENST00000601011 TRIM6-TRIM34B2RNG4 842 aa15.97■□□□□ 0.15
NOTCH3-206ENST00000601011 ARHGEF5Q12774 1597 aa15.96■□□□□ 0.15
NOTCH3-206ENST00000601011 FOXO3O43524 673 aa15.96■□□□□ 0.15
NOTCH3-206ENST00000601011 GLIPR1L2Q4G1C9 344 aa15.96■□□□□ 0.15
NOTCH3-206ENST00000601011 TSPYL4Q9UJ04 414 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms