RNA–Protein interactions for RNA: ENST00000601009.1

FARP1-232, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-232ENST00000601009 MYOM2P54296 1465 aa13.52□□□□□ -0.25
FARP1-232ENST00000601009 PNPLA6Q8IY17 1366 aa13.51□□□□□ -0.25
FARP1-232ENST00000601009 YTHDC2Q9H6S0 1430 aaKnown RBP13.5□□□□□ -0.25
FARP1-232ENST00000601009 NPHP3Q7Z494 1330 aa13.5□□□□□ -0.25
FARP1-232ENST00000601009 DHX57Q6P158 1386 aaKnown RBP13.49□□□□□ -0.25
FARP1-232ENST00000601009 SOS2Q07890 1332 aaPredicted RBP13.49□□□□□ -0.25
FARP1-232ENST00000601009 HRCP23327 699 aa13.49□□□□□ -0.25
FARP1-232ENST00000601009 ESCO1Q5FWF5 840 aa13.49□□□□□ -0.25
FARP1-232ENST00000601009 DDX17Q92841 729 aaKnown RBP13.49□□□□□ -0.25
FARP1-232ENST00000601009 SIRT1Q96EB6 747 aa13.49□□□□□ -0.25
FARP1-232ENST00000601009 ORAI2Q96SN7 254 aa13.49□□□□□ -0.25
FARP1-232ENST00000601009 NRXN1Q9ULB1 1477 aa13.48□□□□□ -0.25
FARP1-232ENST00000601009 AFF2P51816 1311 aa13.48□□□□□ -0.25
FARP1-232ENST00000601009 TMEM132EQ6IEE7 984 aa13.48□□□□□ -0.25
FARP1-232ENST00000601009 C14orf93Q9H972 538 aaKnown RBP13.48□□□□□ -0.25
FARP1-232ENST00000601009 RXRBP28702 533 aa13.47□□□□□ -0.25
FARP1-232ENST00000601009 WAPLQ7Z5K2 1190 aa13.47□□□□□ -0.25
FARP1-232ENST00000601009 STAC3Q96MF2 364 aa13.47□□□□□ -0.25
FARP1-232ENST00000601009 C8orf37Q96NL8 207 aa13.47□□□□□ -0.25
FARP1-232ENST00000601009 CDK12Q9NYV4 1490 aaPredicted RBP13.46□□□□□ -0.25
FARP1-232ENST00000601009 KIF1AQ12756 1690 aa13.45□□□□□ -0.26
FARP1-232ENST00000601009 FMN2Q9NZ56 1722 aa13.44□□□□□ -0.26
FARP1-232ENST00000601009 COL22A1Q8NFW1 1626 aaPredicted RBP13.44□□□□□ -0.26
FARP1-232ENST00000601009 ADAMTS2O95450 1211 aa13.44□□□□□ -0.26
FARP1-232ENST00000601009 CFAP70Q5T0N1 1121 aa13.44□□□□□ -0.26
FARP1-232ENST00000601009 NGLY1Q96IV0 654 aa13.44□□□□□ -0.26
FARP1-232ENST00000601009 PLEKHH1Q9ULM0 1364 aa13.44□□□□□ -0.26
FARP1-232ENST00000601009 DLC1Q96QB1 1528 aa13.43□□□□□ -0.26
FARP1-232ENST00000601009 PXDNQ92626 1479 aa13.42□□□□□ -0.26
FARP1-232ENST00000601009 FOXO3O43524 673 aa13.42□□□□□ -0.26
FARP1-232ENST00000601009 RBM6P78332 1123 aaKnown RBP13.42□□□□□ -0.26
FARP1-232ENST00000601009 POGKQ9P215 609 aa13.42□□□□□ -0.26
FARP1-232ENST00000601009 NUTM2FA1L443 756 aa13.41□□□□□ -0.26
FARP1-232ENST00000601009 PRAM1Q96QH2 718 aa13.41□□□□□ -0.26
FARP1-232ENST00000601009 QTRT2Q9H974 415 aaKnown RBP13.41□□□□□ -0.26
FARP1-232ENST00000601009 DCAF11Q8TEB1 546 aa13.4□□□□□ -0.26
FARP1-232ENST00000601009 EIF3AQ14152 1382 aaKnown RBP13.4□□□□□ -0.26
FARP1-232ENST00000601009 PSME1Q06323 249 aa13.39□□□□□ -0.27
FARP1-232ENST00000601009 USP21Q9UK80 565 aa13.39□□□□□ -0.27
FARP1-232ENST00000601009 TRPC5Q9UL62 973 aaPredicted RBP13.39□□□□□ -0.27
FARP1-232ENST00000601009 ADGRB2O60241 1585 aa13.38□□□□□ -0.27
FARP1-232ENST00000601009 XPCQ01831 940 aaPredicted RBP13.38□□□□□ -0.27
FARP1-232ENST00000601009 SAFB2Q14151 953 aaKnown RBP eCLIP13.38□□□□□ -0.27
FARP1-232ENST00000601009 PHF8Q9UPP1 1060 aa13.38□□□□□ -0.27
FARP1-232ENST00000601009 KDM2AQ9Y2K7 1162 aa13.38□□□□□ -0.27
FARP1-232ENST00000601009 ANKARQ7Z5J8 1434 aa13.38□□□□□ -0.27
FARP1-232ENST00000601009 ADGRB1O14514 1584 aa13.37□□□□□ -0.27
FARP1-232ENST00000601009 MARF1Q9Y4F3 1742 aaKnown RBP13.37□□□□□ -0.27
FARP1-232ENST00000601009 FNBP4Q8N3X1 1017 aaPredicted RBP13.37□□□□□ -0.27
FARP1-232ENST00000601009 SPATA31A3Q5VYP0 1347 aa13.37□□□□□ -0.27
FARP1-232ENST00000601009 KRT28Q7Z3Y7 464 aa13.36□□□□□ -0.27
FARP1-232ENST00000601009 TRAK1Q9UPV9 953 aa13.36□□□□□ -0.27
FARP1-232ENST00000601009 RGPD8O14715 1765 aaPredicted RBP13.35□□□□□ -0.27
FARP1-232ENST00000601009 HAP1P54257 671 aaPredicted RBP13.35□□□□□ -0.27
FARP1-232ENST00000601009 UPF1Q92900 1129 aaKnown RBP eCLIP13.35□□□□□ -0.27
FARP1-232ENST00000601009 RGS12O14924 1447 aa13.35□□□□□ -0.27
FARP1-232ENST00000601009 TNS3Q68CZ2 1445 aa13.35□□□□□ -0.27
FARP1-232ENST00000601009 SBNO1A3KN83 1393 aa13.34□□□□□ -0.27
FARP1-232ENST00000601009 ARHGEF10O15013 1369 aa13.34□□□□□ -0.27
FARP1-232ENST00000601009 ATRNO75882 1429 aa13.33□□□□□ -0.28
FARP1-232ENST00000601009 TULP4Q9NRJ4 1543 aa13.32□□□□□ -0.28
FARP1-232ENST00000601009 MINK1Q8N4C8 1332 aaPredicted RBP13.32□□□□□ -0.28
FARP1-232ENST00000601009 GPRASP1Q5JY77 1395 aa13.32□□□□□ -0.28
FARP1-232ENST00000601009 ATAD2Q6PL18 1390 aa13.32□□□□□ -0.28
FARP1-232ENST00000601009 USP32Q8NFA0 1604 aa13.31□□□□□ -0.28
FARP1-232ENST00000601009 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.31□□□□□ -0.28
FARP1-232ENST00000601009 KIAA1210Q9ULL0 1709 aa13.31□□□□□ -0.28
FARP1-232ENST00000601009 WASLO00401 505 aaPredicted RBP13.31□□□□□ -0.28
FARP1-232ENST00000601009 LMOD2Q6P5Q4 547 aa13.31□□□□□ -0.28
FARP1-232ENST00000601009 HIRIP3Q9BW71 556 aaPredicted RBP13.31□□□□□ -0.28
FARP1-232ENST00000601009 BCL9LQ86UU0 1499 aa13.3□□□□□ -0.28
FARP1-232ENST00000601009 ITSN1Q15811 1721 aa13.3□□□□□ -0.28
FARP1-232ENST00000601009 ARHGEF28Q8N1W1 1705 aaKnown RBP13.3□□□□□ -0.28
FARP1-232ENST00000601009 UNC5CLQ8IV45 518 aa13.29□□□□□ -0.28
FARP1-232ENST00000601009 PMFBP1Q8TBY8 1022 aa13.29□□□□□ -0.28
FARP1-232ENST00000601009 NGDNQ8NEJ9 315 aaKnown RBP13.28□□□□□ -0.28
FARP1-232ENST00000601009 GJD4Q96KN9 370 aaPredicted RBP13.28□□□□□ -0.28
FARP1-232ENST00000601009 SLIT2O94813 1529 aa13.28□□□□□ -0.28
FARP1-232ENST00000601009 NWD2Q9ULI1 1742 aa13.27□□□□□ -0.29
FARP1-232ENST00000601009 EP400Q96L91 3159 aa13.26□□□□□ -0.29
FARP1-232ENST00000601009 ABCA3Q99758 1704 aa13.26□□□□□ -0.29
FARP1-232ENST00000601009 TRPM3Q9HCF6 1732 aaPredicted RBP13.25□□□□□ -0.29
FARP1-232ENST00000601009 PRR36Q9H6K5 1346 aa13.24□□□□□ -0.29
FARP1-232ENST00000601009 CABLES1Q8TDN4 633 aa13.24□□□□□ -0.29
FARP1-232ENST00000601009 NUDT16Q96DE0 195 aaKnown RBP13.24□□□□□ -0.29
FARP1-232ENST00000601009 PLCH1Q4KWH8 1693 aa13.24□□□□□ -0.29
FARP1-232ENST00000601009 ALS2Q96Q42 1657 aa13.24□□□□□ -0.29
FARP1-232ENST00000601009 ATP7BP35670 1465 aa13.23□□□□□ -0.29
FARP1-232ENST00000601009 RALGAPBQ86X10 1494 aa13.23□□□□□ -0.29
FARP1-232ENST00000601009 PAK3O75914 559 aaPredicted RBP13.23□□□□□ -0.29
FARP1-232ENST00000601009 PLEKHG5O94827 1062 aa13.23□□□□□ -0.29
FARP1-232ENST00000601009 VPS72Q15906 364 aa13.23□□□□□ -0.29
FARP1-232ENST00000601009 CCDC125Q86Z20 511 aa13.23□□□□□ -0.29
FARP1-232ENST00000601009 CCDC9Q9Y3X0 531 aaKnown RBP13.23□□□□□ -0.29
FARP1-232ENST00000601009 CDK19Q9BWU1 502 aa13.22□□□□□ -0.29
FARP1-232ENST00000601009 GLI3P10071 1580 aa13.21□□□□□ -0.29
FARP1-232ENST00000601009 CCDC61Q9Y6R9 512 aa13.21□□□□□ -0.29
FARP1-232ENST00000601009 COL14A1Q05707 1796 aaKnown RBP13.21□□□□□ -0.29
FARP1-232ENST00000601009 CENPJQ9HC77 1338 aaPredicted RBP13.2□□□□□ -0.3
FARP1-232ENST00000601009 TOPAZ1Q8N9V7 1692 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms