RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 ATRNO75882 1429 aa25.41■■□□□ 1.66
USE1-208ENST00000600970 RRBP1Q9P2E9 1410 aaKnown RBP25.41■■□□□ 1.66
USE1-208ENST00000600970 MARF1Q9Y4F3 1742 aaKnown RBP25.39■■□□□ 1.65
USE1-208ENST00000600970 MYOM2P54296 1465 aa25.39■■□□□ 1.65
USE1-208ENST00000600970 CDC42BPGQ6DT37 1551 aa25.39■■□□□ 1.65
USE1-208ENST00000600970 NPHP3Q7Z494 1330 aa25.37■■□□□ 1.65
USE1-208ENST00000600970 PXDNQ92626 1479 aa25.36■■□□□ 1.65
USE1-208ENST00000600970 ESCO1Q5FWF5 840 aa25.36■■□□□ 1.65
USE1-208ENST00000600970 SLC4A1APQ9BWU0 796 aaKnown RBP25.34■■□□□ 1.65
USE1-208ENST00000600970 BCL9LQ86UU0 1499 aa25.34■■□□□ 1.65
USE1-208ENST00000600970 FOXO3O43524 673 aa25.3■■□□□ 1.64
USE1-208ENST00000600970 XPCQ01831 940 aaPredicted RBP25.3■■□□□ 1.64
USE1-208ENST00000600970 ADGRF5Q8IZF2 1346 aa25.29■■□□□ 1.64
USE1-208ENST00000600970 EP400Q96L91 3159 aa25.29■■□□□ 1.64
USE1-208ENST00000600970 SRCAPQ6ZRS2 3230 aa25.27■■□□□ 1.64
USE1-208ENST00000600970 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.27■■□□□ 1.64
USE1-208ENST00000600970 ZRANB1Q9UGI0 708 aa25.27■■□□□ 1.64
USE1-208ENST00000600970 LRPPRCP42704 1394 aaKnown RBP25.27■■□□□ 1.64
USE1-208ENST00000600970 NUTM2FA1L443 756 aa25.26■■□□□ 1.63
USE1-208ENST00000600970 FOXD1Q16676 465 aa25.26■■□□□ 1.63
USE1-208ENST00000600970 WAPLQ7Z5K2 1190 aa25.26■■□□□ 1.63
USE1-208ENST00000600970 GJD4Q96KN9 370 aaPredicted RBP25.26■■□□□ 1.63
USE1-208ENST00000600970 STK26Q9P289 416 aa25.26■■□□□ 1.63
USE1-208ENST00000600970 TECPR2O15040 1411 aa25.26■■□□□ 1.63
USE1-208ENST00000600970 IFT172Q9UG01 1749 aa25.26■■□□□ 1.63
USE1-208ENST00000600970 CCDC125Q86Z20 511 aa25.25■■□□□ 1.63
USE1-208ENST00000600970 KNDC1Q76NI1 1749 aa25.25■■□□□ 1.63
USE1-208ENST00000600970 FMN2Q9NZ56 1722 aa25.23■■□□□ 1.63
USE1-208ENST00000600970 PLEKHH1Q9ULM0 1364 aa25.21■■□□□ 1.63
USE1-208ENST00000600970 RGL3Q3MIN7 710 aa25.21■■□□□ 1.63
USE1-208ENST00000600970 GLI3P10071 1580 aa25.21■■□□□ 1.63
USE1-208ENST00000600970 ABCC11Q96J66 1382 aa25.2■■□□□ 1.63
USE1-208ENST00000600970 KIF1AQ12756 1690 aa25.2■■□□□ 1.63
USE1-208ENST00000600970 TMEM132EQ6IEE7 984 aa25.2■■□□□ 1.62
USE1-208ENST00000600970 SLIT2O94813 1529 aa25.2■■□□□ 1.62
USE1-208ENST00000600970 CCDC144AA2RUR9 1427 aa25.2■■□□□ 1.62
USE1-208ENST00000600970 SPATA31E1Q6ZUB1 1445 aa25.2■■□□□ 1.62
USE1-208ENST00000600970 SPATA31A3Q5VYP0 1347 aa25.19■■□□□ 1.62
USE1-208ENST00000600970 UNC5CLQ8IV45 518 aa25.19■■□□□ 1.62
USE1-208ENST00000600970 ANKRD30BQ9BXX2 1392 aa25.18■■□□□ 1.62
USE1-208ENST00000600970 RALGAPBQ86X10 1494 aa25.18■■□□□ 1.62
USE1-208ENST00000600970 BRWD3Q6RI45 1802 aa25.17■■□□□ 1.62
USE1-208ENST00000600970 USP32Q8NFA0 1604 aa25.17■■□□□ 1.62
USE1-208ENST00000600970 RGPD8O14715 1765 aaPredicted RBP25.16■■□□□ 1.62
USE1-208ENST00000600970 PIK3C2GO75747 1445 aa25.15■■□□□ 1.62
USE1-208ENST00000600970 YTHDC2Q9H6S0 1430 aaKnown RBP25.14■■□□□ 1.62
USE1-208ENST00000600970 KRT28Q7Z3Y7 464 aa25.14■■□□□ 1.62
USE1-208ENST00000600970 BLMP54132 1417 aaPredicted RBP25.12■■□□□ 1.61
USE1-208ENST00000600970 MPHOSPH9Q99550 1183 aa25.1■■□□□ 1.61
USE1-208ENST00000600970 SIRT1Q96EB6 747 aa25.09■■□□□ 1.61
USE1-208ENST00000600970 PLCH1Q4KWH8 1693 aa25.09■■□□□ 1.61
USE1-208ENST00000600970 TNS3Q68CZ2 1445 aa25.09■■□□□ 1.61
USE1-208ENST00000600970 PHF8Q9UPP1 1060 aa25.08■■□□□ 1.61
USE1-208ENST00000600970 ABCA3Q99758 1704 aa25.08■■□□□ 1.61
USE1-208ENST00000600970 NWD2Q9ULI1 1742 aa25.08■■□□□ 1.61
USE1-208ENST00000600970 HAP1P54257 671 aaPredicted RBP25.06■■□□□ 1.6
USE1-208ENST00000600970 PSME1Q06323 249 aa25.06■■□□□ 1.6
USE1-208ENST00000600970 DEFB132Q7Z7B7 95 aa25.06■■□□□ 1.6
USE1-208ENST00000600970 SEPT12Q8IYM1 358 aa25.06■■□□□ 1.6
USE1-208ENST00000600970 CABLES1Q8TDN4 633 aa25.06■■□□□ 1.6
USE1-208ENST00000600970 VPS72Q15906 364 aa25.05■■□□□ 1.6
USE1-208ENST00000600970 C14orf93Q9H972 538 aaKnown RBP25.05■■□□□ 1.6
USE1-208ENST00000600970 NRXN1Q9ULB1 1477 aa25.04■■□□□ 1.6
USE1-208ENST00000600970 PLEKHG5O94827 1062 aa25.03■■□□□ 1.6
USE1-208ENST00000600970 SBNO1A3KN83 1393 aa25.03■■□□□ 1.6
USE1-208ENST00000600970 ONECUT3O60422 494 aaPredicted RBP25.02■■□□□ 1.6
USE1-208ENST00000600970 SF3B2Q13435 895 aaKnown RBP25.01■■□□□ 1.59
USE1-208ENST00000600970 CCDC9Q9Y3X0 531 aaKnown RBP25.01■■□□□ 1.59
USE1-208ENST00000600970 DHX57Q6P158 1386 aaKnown RBP25.01■■□□□ 1.59
USE1-208ENST00000600970 CFAP70Q5T0N1 1121 aa25■■□□□ 1.59
USE1-208ENST00000600970 ARHGEF10O15013 1369 aa24.99■■□□□ 1.59
USE1-208ENST00000600970 LMOD2Q6P5Q4 547 aa24.99■■□□□ 1.59
USE1-208ENST00000600970 SAFB2Q14151 953 aaKnown RBP eCLIP24.98■■□□□ 1.59
USE1-208ENST00000600970 KRT27Q7Z3Y8 459 aa24.98■■□□□ 1.59
USE1-208ENST00000600970 PRAM1Q96QH2 718 aa24.98■■□□□ 1.59
USE1-208ENST00000600970 NRAPQ86VF7 1730 aa24.97■■□□□ 1.59
USE1-208ENST00000600970 FAM83GA6ND36 823 aa24.96■■□□□ 1.59
USE1-208ENST00000600970 PMFBP1Q8TBY8 1022 aa24.95■■□□□ 1.58
USE1-208ENST00000600970 TRPM3Q9HCF6 1732 aaPredicted RBP24.95■■□□□ 1.58
USE1-208ENST00000600970 LRP5O75197 1615 aa24.94■■□□□ 1.58
USE1-208ENST00000600970 ANKARQ7Z5J8 1434 aa24.94■■□□□ 1.58
USE1-208ENST00000600970 ADGRB2O60241 1585 aa24.93■■□□□ 1.58
USE1-208ENST00000600970 DLC1Q96QB1 1528 aa24.93■■□□□ 1.58
USE1-208ENST00000600970 ALS2Q96Q42 1657 aa24.91■■□□□ 1.58
USE1-208ENST00000600970 POGKQ9P215 609 aa24.91■■□□□ 1.58
USE1-208ENST00000600970 A0A0G2JS52 829 aa24.89■■□□□ 1.58
USE1-208ENST00000600970 MYT1Q01538 1121 aa24.89■■□□□ 1.58
USE1-208ENST00000600970 FAM98CQ17RN3 349 aaKnown RBP24.89■■□□□ 1.58
USE1-208ENST00000600970 COL14A1Q05707 1796 aaKnown RBP24.89■■□□□ 1.57
USE1-208ENST00000600970 BAG6P46379 1132 aa24.88■■□□□ 1.57
USE1-208ENST00000600970 BTG4Q9NY30 223 aa24.88■■□□□ 1.57
USE1-208ENST00000600970 ADGRB1O14514 1584 aa24.87■■□□□ 1.57
USE1-208ENST00000600970 PSDA5PKW4 1024 aaPredicted RBP24.85■■□□□ 1.57
USE1-208ENST00000600970 HIRIP3Q9BW71 556 aaPredicted RBP24.85■■□□□ 1.57
USE1-208ENST00000600970 RGPD1P0DJD0 1748 aa24.85■■□□□ 1.57
USE1-208ENST00000600970 CRYBG1Q9Y4K1 1723 aa24.85■■□□□ 1.57
USE1-208ENST00000600970 GPRASP1Q5JY77 1395 aa24.84■■□□□ 1.57
USE1-208ENST00000600970 PRR36Q9H6K5 1346 aa24.84■■□□□ 1.57
USE1-208ENST00000600970 ACIN1Q9UKV3 1341 aaKnown RBP24.84■■□□□ 1.57
USE1-208ENST00000600970 TRAK1Q9UPV9 953 aa24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms