RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.67■■■□□ 2.18
PNKP-215ENST00000600910 TMEM94Q12767 1356 aa28.64■■■□□ 2.18
PNKP-215ENST00000600910 LRRC7Q96NW7 1537 aa28.64■■■□□ 2.18
PNKP-215ENST00000600910 LTBP4Q8N2S1 1624 aa28.63■■■□□ 2.17
PNKP-215ENST00000600910 NALCNQ8IZF0 1738 aa28.62■■■□□ 2.17
PNKP-215ENST00000600910 SLC24A1O60721 1099 aa28.61■■■□□ 2.17
PNKP-215ENST00000600910 ADGRB2O60241 1585 aa28.6■■■□□ 2.17
PNKP-215ENST00000600910 TMF1P82094 1093 aa28.6■■■□□ 2.17
PNKP-215ENST00000600910 C14orf37Q86TY3 774 aa28.6■■■□□ 2.17
PNKP-215ENST00000600910 TULP4Q9NRJ4 1543 aa28.59■■■□□ 2.17
PNKP-215ENST00000600910 ADGRL3Q9HAR2 1447 aa28.59■■■□□ 2.17
PNKP-215ENST00000600910 NCOA3Q9Y6Q9 1424 aa28.59■■■□□ 2.17
PNKP-215ENST00000600910 DISP3Q9P2K9 1392 aa28.59■■■□□ 2.17
PNKP-215ENST00000600910 XIRP1Q702N8 1843 aaKnown RBP28.58■■■□□ 2.17
PNKP-215ENST00000600910 EVC2Q86UK5 1308 aa28.58■■■□□ 2.17
PNKP-215ENST00000600910 C11orf95C9JLR9 678 aaPredicted RBP28.57■■■□□ 2.16
PNKP-215ENST00000600910 ZNF316A6NFI3 1004 aaPredicted RBP28.56■■■□□ 2.16
PNKP-215ENST00000600910 WASLO00401 505 aaPredicted RBP28.54■■■□□ 2.16
PNKP-215ENST00000600910 CDK19Q9BWU1 502 aa28.54■■■□□ 2.16
PNKP-215ENST00000600910 CDC42BPGQ6DT37 1551 aa28.53■■■□□ 2.16
PNKP-215ENST00000600910 C19orf44Q9H6X5 657 aa28.52■■■□□ 2.16
PNKP-215ENST00000600910 SRPK2P78362 688 aaKnown RBP28.51■■■□□ 2.15
PNKP-215ENST00000600910 CABP2Q9NPB3 220 aa28.51■■■□□ 2.15
PNKP-215ENST00000600910 KIF7Q2M1P5 1343 aa28.5■■■□□ 2.15
PNKP-215ENST00000600910 MSH6P52701 1360 aa28.5■■■□□ 2.15
PNKP-215ENST00000600910 CDCA8Q53HL2 280 aa28.5■■■□□ 2.15
PNKP-215ENST00000600910 WASHC2AQ641Q2 1341 aa28.49■■■□□ 2.15
PNKP-215ENST00000600910 POLR3GLQ9BT43 218 aa28.48■■■□□ 2.15
PNKP-215ENST00000600910 CCDC7Q96M83 1385 aa28.48■■■□□ 2.15
PNKP-215ENST00000600910 DCCP43146 1447 aa28.47■■■□□ 2.15
PNKP-215ENST00000600910 FMN2Q9NZ56 1722 aa28.46■■■□□ 2.15
PNKP-215ENST00000600910 NUTM2FA1L443 756 aa28.45■■■□□ 2.14
PNKP-215ENST00000600910 PUS7Q96PZ0 661 aaKnown RBP28.44■■■□□ 2.14
PNKP-215ENST00000600910 ATF3P18847 181 aa28.43■■■□□ 2.14
PNKP-215ENST00000600910 ATP7BP35670 1465 aa28.42■■■□□ 2.14
PNKP-215ENST00000600910 ATAD2Q6PL18 1390 aa28.41■■■□□ 2.14
PNKP-215ENST00000600910 CADPS2Q86UW7 1296 aa28.41■■■□□ 2.14
PNKP-215ENST00000600910 USP32Q8NFA0 1604 aa28.41■■■□□ 2.14
PNKP-215ENST00000600910 NUDT16Q96DE0 195 aaKnown RBP28.41■■■□□ 2.14
PNKP-215ENST00000600910 PRR36Q9H6K5 1346 aa28.41■■■□□ 2.14
PNKP-215ENST00000600910 ANKARQ7Z5J8 1434 aa28.39■■■□□ 2.14
PNKP-215ENST00000600910 RGPD8O14715 1765 aaPredicted RBP28.37■■■□□ 2.13
PNKP-215ENST00000600910 CCDC61Q9Y6R9 512 aa28.36■■■□□ 2.13
PNKP-215ENST00000600910 MST1RQ04912 1400 aa28.36■■■□□ 2.13
PNKP-215ENST00000600910 MYOM1P52179 1685 aa28.36■■■□□ 2.13
PNKP-215ENST00000600910 TMC1Q8TDI8 760 aa28.35■■■□□ 2.13
PNKP-215ENST00000600910 TOPAZ1Q8N9V7 1692 aa28.35■■■□□ 2.13
PNKP-215ENST00000600910 C1orf167Q5SNV9 1468 aa28.34■■■□□ 2.13
PNKP-215ENST00000600910 PPIP5K1Q6PFW1 1433 aa28.33■■■□□ 2.13
PNKP-215ENST00000600910 ITSN1Q15811 1721 aa28.33■■■□□ 2.13
PNKP-215ENST00000600910 CERKQ8TCT0 537 aa28.32■■■□□ 2.12
PNKP-215ENST00000600910 SLC12A5Q9H2X9 1139 aa28.32■■■□□ 2.12
PNKP-215ENST00000600910 CABP1Q9NZU7 370 aa28.32■■■□□ 2.12
PNKP-215ENST00000600910 IQSEC2Q5JU85 1478 aa28.32■■■□□ 2.12
PNKP-215ENST00000600910 NINLQ9Y2I6 1382 aa28.31■■■□□ 2.12
PNKP-215ENST00000600910 ESCO1Q5FWF5 840 aa28.29■■■□□ 2.12
PNKP-215ENST00000600910 SLAIN2Q9P270 581 aa28.29■■■□□ 2.12
PNKP-215ENST00000600910 DDX10Q13206 875 aaKnown RBP28.28■■■□□ 2.12
PNKP-215ENST00000600910 ORAI2Q96SN7 254 aa28.28■■■□□ 2.12
PNKP-215ENST00000600910 PMFBP1Q8TBY8 1022 aa28.26■■■□□ 2.11
PNKP-215ENST00000600910 PLEKHG3A1L390 1219 aa28.25■■■□□ 2.11
PNKP-215ENST00000600910 PHF8Q9UPP1 1060 aa28.25■■■□□ 2.11
PNKP-215ENST00000600910 CD163L1Q9NR16 1453 aa28.23■■■□□ 2.11
PNKP-215ENST00000600910 PANK3Q9H999 370 aa28.22■■■□□ 2.11
PNKP-215ENST00000600910 ANKRD36BQ8N2N9 1353 aa28.22■■■□□ 2.11
PNKP-215ENST00000600910 TERF2IPQ9NYB0 399 aa28.21■■■□□ 2.11
PNKP-215ENST00000600910 ACEP12821 1306 aa28.21■■■□□ 2.11
PNKP-215ENST00000600910 A0A1W2PP64 1363 aa28.21■■■□□ 2.11
PNKP-215ENST00000600910 TOM1O60784 492 aa28.21■■■□□ 2.11
PNKP-215ENST00000600910 KIF1AQ12756 1690 aa28.2■■■□□ 2.11
PNKP-215ENST00000600910 POLR3AO14802 1390 aaPredicted RBP28.2■■■□□ 2.1
PNKP-215ENST00000600910 HDGFL2Q7Z4V5 671 aaPredicted RBP28.2■■■□□ 2.1
PNKP-215ENST00000600910 NGDNQ8NEJ9 315 aaKnown RBP28.2■■■□□ 2.1
PNKP-215ENST00000600910 CPSF1Q10570 1443 aaKnown RBP28.19■■■□□ 2.1
PNKP-215ENST00000600910 BRINP3Q76B58 766 aa28.19■■■□□ 2.1
PNKP-215ENST00000600910 UBAP1LF5GYI3 381 aa28.18■■■□□ 2.1
PNKP-215ENST00000600910 AKAP12Q02952 1782 aa28.17■■■□□ 2.1
PNKP-215ENST00000600910 FOXO3O43524 673 aa28.15■■■□□ 2.1
PNKP-215ENST00000600910 ZNF692Q9BU19 519 aaPredicted RBP28.15■■■□□ 2.1
PNKP-215ENST00000600910 CARD14Q9BXL6 1004 aa28.15■■■□□ 2.1
PNKP-215ENST00000600910 KTN1Q86UP2 1357 aaKnown RBP28.15■■■□□ 2.1
PNKP-215ENST00000600910 ROBO1Q9Y6N7 1651 aa28.14■■■□□ 2.09
PNKP-215ENST00000600910 MON2Q7Z3U7 1717 aa28.13■■■□□ 2.09
PNKP-215ENST00000600910 USP6P35125 1406 aa28.12■■■□□ 2.09
PNKP-215ENST00000600910 PIP4K2BP78356 416 aa28.11■■■□□ 2.09
PNKP-215ENST00000600910 NSD3Q9BZ95 1437 aa28.11■■■□□ 2.09
PNKP-215ENST00000600910 PSME1Q06323 249 aa28.1■■■□□ 2.09
PNKP-215ENST00000600910 DDX17Q92841 729 aaKnown RBP28.1■■■□□ 2.09
PNKP-215ENST00000600910 PER1O15534 1290 aaPredicted RBP28.1■■■□□ 2.09
PNKP-215ENST00000600910 EDC4Q6P2E9 1401 aaKnown RBP28.09■■■□□ 2.09
PNKP-215ENST00000600910 NPHP3Q7Z494 1330 aa28.09■■■□□ 2.09
PNKP-215ENST00000600910 XPCQ01831 940 aaPredicted RBP28.08■■■□□ 2.09
PNKP-215ENST00000600910 SCAF1Q9H7N4 1312 aaKnown RBP28.08■■■□□ 2.09
PNKP-215ENST00000600910 NRKQ7Z2Y5 1582 aa28.07■■■□□ 2.08
PNKP-215ENST00000600910 KNSTRNQ9Y448 316 aa28.07■■■□□ 2.08
PNKP-215ENST00000600910 SSH2Q76I76 1423 aa28.06■■■□□ 2.08
PNKP-215ENST00000600910 KRT28Q7Z3Y7 464 aa28.06■■■□□ 2.08
PNKP-215ENST00000600910 NHSL1Q5SYE7 1610 aa28.05■■■□□ 2.08
PNKP-215ENST00000600910 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.04■■■□□ 2.08
PNKP-215ENST00000600910 TTC21BQ7Z4L5 1316 aa28.03■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms