RNA–Protein interactions for RNA: ENST00000600528.1

COPE-210, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 3

Gene COPE, Length 261 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-210ENST00000600528 EP400Q96L91 3159 aa14.26□□□□□ -0.13
COPE-210ENST00000600528 CLTCL1P53675 1640 aa14.26□□□□□ -0.13
COPE-210ENST00000600528 HFM1A2PYH4 1435 aa14.25□□□□□ -0.13
COPE-210ENST00000600528 NPHP3Q7Z494 1330 aa14.24□□□□□ -0.13
COPE-210ENST00000600528 RPGRIP1LQ68CZ1 1315 aa14.23□□□□□ -0.13
COPE-210ENST00000600528 ITGAEP38570 1179 aa14.23□□□□□ -0.13
COPE-210ENST00000600528 PXDNQ92626 1479 aa14.23□□□□□ -0.13
COPE-210ENST00000600528 ESCO1Q5FWF5 840 aa14.22□□□□□ -0.13
COPE-210ENST00000600528 FOXO3O43524 673 aa14.2□□□□□ -0.14
COPE-210ENST00000600528 UNC5CLQ8IV45 518 aa14.2□□□□□ -0.14
COPE-210ENST00000600528 BLMP54132 1417 aaPredicted RBP14.2□□□□□ -0.14
COPE-210ENST00000600528 KIF1BO60333 1816 aa14.2□□□□□ -0.14
COPE-210ENST00000600528 CDC42BPGQ6DT37 1551 aa14.19□□□□□ -0.14
COPE-210ENST00000600528 SLIT2O94813 1529 aa14.19□□□□□ -0.14
COPE-210ENST00000600528 LRPPRCP42704 1394 aaKnown RBP14.19□□□□□ -0.14
COPE-210ENST00000600528 MARF1Q9Y4F3 1742 aaKnown RBP14.18□□□□□ -0.14
COPE-210ENST00000600528 RALGAPBQ86X10 1494 aa14.18□□□□□ -0.14
COPE-210ENST00000600528 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.17□□□□□ -0.14
COPE-210ENST00000600528 ONECUT3O60422 494 aaPredicted RBP14.16□□□□□ -0.14
COPE-210ENST00000600528 XPCQ01831 940 aaPredicted RBP14.16□□□□□ -0.14
COPE-210ENST00000600528 GLI3P10071 1580 aa14.16□□□□□ -0.14
COPE-210ENST00000600528 SPATA31A3Q5VYP0 1347 aa14.15□□□□□ -0.14
COPE-210ENST00000600528 TECPR2O15040 1411 aa14.15□□□□□ -0.14
COPE-210ENST00000600528 DEFB132Q7Z7B7 95 aa14.15□□□□□ -0.14
COPE-210ENST00000600528 NAIPQ13075 1403 aa14.15□□□□□ -0.14
COPE-210ENST00000600528 VPS72Q15906 364 aa14.13□□□□□ -0.15
COPE-210ENST00000600528 WAPLQ7Z5K2 1190 aa14.13□□□□□ -0.15
COPE-210ENST00000600528 ABCC11Q96J66 1382 aa14.12□□□□□ -0.15
COPE-210ENST00000600528 PPLO60437 1756 aa14.12□□□□□ -0.15
COPE-210ENST00000600528 SEPT12Q8IYM1 358 aa14.12□□□□□ -0.15
COPE-210ENST00000600528 NUTM2FA1L443 756 aa14.11□□□□□ -0.15
COPE-210ENST00000600528 KRT28Q7Z3Y7 464 aa14.11□□□□□ -0.15
COPE-210ENST00000600528 ADGRF5Q8IZF2 1346 aa14.11□□□□□ -0.15
COPE-210ENST00000600528 CCDC144AA2RUR9 1427 aa14.1□□□□□ -0.15
COPE-210ENST00000600528 SF3B2Q13435 895 aaKnown RBP14.1□□□□□ -0.15
COPE-210ENST00000600528 PLEKHH1Q9ULM0 1364 aa14.09□□□□□ -0.15
COPE-210ENST00000600528 LRP5O75197 1615 aa14.09□□□□□ -0.15
COPE-210ENST00000600528 USP32Q8NFA0 1604 aa14.09□□□□□ -0.15
COPE-210ENST00000600528 SIRT1Q96EB6 747 aa14.09□□□□□ -0.15
COPE-210ENST00000600528 SLC4A1APQ9BWU0 796 aaKnown RBP14.09□□□□□ -0.15
COPE-210ENST00000600528 STK26Q9P289 416 aa14.09□□□□□ -0.15
COPE-210ENST00000600528 BRWD3Q6RI45 1802 aa14.08□□□□□ -0.15
COPE-210ENST00000600528 RRBP1Q9P2E9 1410 aaKnown RBP14.08□□□□□ -0.15
COPE-210ENST00000600528 KRT27Q7Z3Y8 459 aa14.08□□□□□ -0.16
COPE-210ENST00000600528 FMN2Q9NZ56 1722 aa14.07□□□□□ -0.16
COPE-210ENST00000600528 PSME1Q06323 249 aa14.06□□□□□ -0.16
COPE-210ENST00000600528 TMEM132EQ6IEE7 984 aa14.06□□□□□ -0.16
COPE-210ENST00000600528 PPARGC1BQ86YN6 1023 aaKnown RBP14.06□□□□□ -0.16
COPE-210ENST00000600528 KIF1AQ12756 1690 aa14.06□□□□□ -0.16
COPE-210ENST00000600528 SBNO1A3KN83 1393 aa14.06□□□□□ -0.16
COPE-210ENST00000600528 ANKRD30BQ9BXX2 1392 aa14.06□□□□□ -0.16
COPE-210ENST00000600528 TNS3Q68CZ2 1445 aa14.06□□□□□ -0.16
COPE-210ENST00000600528 SPATA31E1Q6ZUB1 1445 aa14.06□□□□□ -0.16
COPE-210ENST00000600528 HRCP23327 699 aa14.05□□□□□ -0.16
COPE-210ENST00000600528 CABLES1Q8TDN4 633 aa14.05□□□□□ -0.16
COPE-210ENST00000600528 PHF8Q9UPP1 1060 aa14.05□□□□□ -0.16
COPE-210ENST00000600528 KNDC1Q76NI1 1749 aa14.04□□□□□ -0.16
COPE-210ENST00000600528 NWD2Q9ULI1 1742 aa14.04□□□□□ -0.16
COPE-210ENST00000600528 FAM83GA6ND36 823 aa14.04□□□□□ -0.16
COPE-210ENST00000600528 BAG6P46379 1132 aa14.04□□□□□ -0.16
COPE-210ENST00000600528 YTHDC2Q9H6S0 1430 aaKnown RBP14.04□□□□□ -0.16
COPE-210ENST00000600528 PIK3C2GO75747 1445 aa14.03□□□□□ -0.16
COPE-210ENST00000600528 NRXN1Q9ULB1 1477 aa14.02□□□□□ -0.16
COPE-210ENST00000600528 ARHGEF10O15013 1369 aa14.02□□□□□ -0.17
COPE-210ENST00000600528 PSDA5PKW4 1024 aaPredicted RBP14.02□□□□□ -0.17
COPE-210ENST00000600528 HAP1P54257 671 aaPredicted RBP14.02□□□□□ -0.17
COPE-210ENST00000600528 RGL3Q3MIN7 710 aa14.02□□□□□ -0.17
COPE-210ENST00000600528 PLCH1Q4KWH8 1693 aa14.01□□□□□ -0.17
COPE-210ENST00000600528 C14orf93Q9H972 538 aaKnown RBP14.01□□□□□ -0.17
COPE-210ENST00000600528 CCDC9Q9Y3X0 531 aaKnown RBP14.01□□□□□ -0.17
COPE-210ENST00000600528 IFT172Q9UG01 1749 aa13.99□□□□□ -0.17
COPE-210ENST00000600528 DISP2A7MBM2 1401 aa13.98□□□□□ -0.17
COPE-210ENST00000600528 EN1Q05925 392 aaPredicted RBP13.98□□□□□ -0.17
COPE-210ENST00000600528 FAM98CQ17RN3 349 aaKnown RBP13.98□□□□□ -0.17
COPE-210ENST00000600528 ABCA3Q99758 1704 aa13.98□□□□□ -0.17
COPE-210ENST00000600528 RGPD8O14715 1765 aaPredicted RBP13.97□□□□□ -0.17
COPE-210ENST00000600528 BTG4Q9NY30 223 aa13.97□□□□□ -0.17
COPE-210ENST00000600528 NRAPQ86VF7 1730 aa13.96□□□□□ -0.17
COPE-210ENST00000600528 LMOD2Q6P5Q4 547 aa13.96□□□□□ -0.17
COPE-210ENST00000600528 ANKARQ7Z5J8 1434 aa13.96□□□□□ -0.18
COPE-210ENST00000600528 DHX57Q6P158 1386 aaKnown RBP13.96□□□□□ -0.18
COPE-210ENST00000600528 SPATA31A5Q5VU36 1347 aa13.95□□□□□ -0.18
COPE-210ENST00000600528 SPATA31A7Q8IWB4 1347 aa13.95□□□□□ -0.18
COPE-210ENST00000600528 PLEKHG5O94827 1062 aa13.95□□□□□ -0.18
COPE-210ENST00000600528 PMFBP1Q8TBY8 1022 aa13.95□□□□□ -0.18
COPE-210ENST00000600528 PRAM1Q96QH2 718 aa13.95□□□□□ -0.18
COPE-210ENST00000600528 MPHOSPH9Q99550 1183 aa13.95□□□□□ -0.18
COPE-210ENST00000600528 A0A0G2JS52 829 aa13.94□□□□□ -0.18
COPE-210ENST00000600528 MYT1Q01538 1121 aa13.94□□□□□ -0.18
COPE-210ENST00000600528 R3HDM1Q15032 1099 aaKnown RBP13.94□□□□□ -0.18
COPE-210ENST00000600528 CFAP70Q5T0N1 1121 aa13.94□□□□□ -0.18
COPE-210ENST00000600528 FAM182BQ5T319 152 aa13.93□□□□□ -0.18
COPE-210ENST00000600528 CAMKK2Q96RR4 588 aa13.93□□□□□ -0.18
COPE-210ENST00000600528 RGPD1P0DJD0 1748 aa13.93□□□□□ -0.18
COPE-210ENST00000600528 COL14A1Q05707 1796 aaKnown RBP13.92□□□□□ -0.18
COPE-210ENST00000600528 DLC1Q96QB1 1528 aa13.92□□□□□ -0.18
COPE-210ENST00000600528 EZH2Q15910 746 aaKnown RBP13.92□□□□□ -0.18
COPE-210ENST00000600528 TRPM3Q9HCF6 1732 aaPredicted RBP13.92□□□□□ -0.18
COPE-210ENST00000600528 THSD7AQ9UPZ6 1657 aa13.91□□□□□ -0.18
COPE-210ENST00000600528 ACIN1Q9UKV3 1341 aaKnown RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms