RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-223ENST00000600523 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.52■□□□□ 0.56
SRRM1-223ENST00000600523 SAFB2Q14151 953 aaKnown RBP eCLIP18.5■□□□□ 0.55
SRRM1-223ENST00000600523 NBPF1Q3BBV0 1214 aa18.5■□□□□ 0.55
SRRM1-223ENST00000600523 NALCNQ8IZF0 1738 aa18.49■□□□□ 0.55
SRRM1-223ENST00000600523 EIF3AQ14152 1382 aaKnown RBP18.48■□□□□ 0.55
SRRM1-223ENST00000600523 PLEKHH1Q9ULM0 1364 aa18.48■□□□□ 0.55
SRRM1-223ENST00000600523 TRPM1Q7Z4N2 1603 aa18.46■□□□□ 0.55
SRRM1-223ENST00000600523 NBPF8Q3BBV2 869 aa18.46■□□□□ 0.55
SRRM1-223ENST00000600523 CARD11Q9BXL7 1154 aa18.46■□□□□ 0.55
SRRM1-223ENST00000600523 CDC42BPGQ6DT37 1551 aa18.46■□□□□ 0.55
SRRM1-223ENST00000600523 MST1RQ04912 1400 aa18.44■□□□□ 0.54
SRRM1-223ENST00000600523 MINK1Q8N4C8 1332 aaPredicted RBP18.44■□□□□ 0.54
SRRM1-223ENST00000600523 CENPJQ9HC77 1338 aaPredicted RBP18.44■□□□□ 0.54
SRRM1-223ENST00000600523 RALGAPBQ86X10 1494 aa18.43■□□□□ 0.54
SRRM1-223ENST00000600523 ROBO1Q9Y6N7 1651 aa18.43■□□□□ 0.54
SRRM1-223ENST00000600523 HSPA1LP34931 641 aa18.42■□□□□ 0.54
SRRM1-223ENST00000600523 C1orf167Q5SNV9 1468 aa18.41■□□□□ 0.54
SRRM1-223ENST00000600523 ARHGEF28Q8N1W1 1705 aaKnown RBP18.41■□□□□ 0.54
SRRM1-223ENST00000600523 BRINP3Q76B58 766 aa18.41■□□□□ 0.54
SRRM1-223ENST00000600523 HIRIP3Q9BW71 556 aaPredicted RBP18.41■□□□□ 0.54
SRRM1-223ENST00000600523 GPRASP1Q5JY77 1395 aa18.41■□□□□ 0.54
SRRM1-223ENST00000600523 ESCO1Q5FWF5 840 aa18.4■□□□□ 0.54
SRRM1-223ENST00000600523 NUTM2FA1L443 756 aa18.39■□□□□ 0.53
SRRM1-223ENST00000600523 WASLO00401 505 aaPredicted RBP18.39■□□□□ 0.53
SRRM1-223ENST00000600523 ADGRB2O60241 1585 aa18.38■□□□□ 0.53
SRRM1-223ENST00000600523 SLC24A1O60721 1099 aa18.36■□□□□ 0.53
SRRM1-223ENST00000600523 FMN2Q9NZ56 1722 aa18.35■□□□□ 0.53
SRRM1-223ENST00000600523 ANKARQ7Z5J8 1434 aa18.35■□□□□ 0.53
SRRM1-223ENST00000600523 ORAI2Q96SN7 254 aa18.35■□□□□ 0.53
SRRM1-223ENST00000600523 NPHP3Q7Z494 1330 aa18.34■□□□□ 0.53
SRRM1-223ENST00000600523 EVC2Q86UK5 1308 aa18.34■□□□□ 0.53
SRRM1-223ENST00000600523 SRPK2P78362 688 aaKnown RBP18.34■□□□□ 0.53
SRRM1-223ENST00000600523 CDK19Q9BWU1 502 aa18.34■□□□□ 0.53
SRRM1-223ENST00000600523 PHLPP1O60346 1717 aa18.32■□□□□ 0.52
SRRM1-223ENST00000600523 PHF8Q9UPP1 1060 aa18.32■□□□□ 0.52
SRRM1-223ENST00000600523 TULP4Q9NRJ4 1543 aa18.32■□□□□ 0.52
SRRM1-223ENST00000600523 QRICH2Q9H0J4 1663 aa18.31■□□□□ 0.52
SRRM1-223ENST00000600523 AHDC1Q5TGY3 1603 aaPredicted RBP18.31■□□□□ 0.52
SRRM1-223ENST00000600523 LRRC59Q96AG4 307 aaKnown RBP18.31■□□□□ 0.52
SRRM1-223ENST00000600523 NUDT16Q96DE0 195 aaKnown RBP18.3■□□□□ 0.52
SRRM1-223ENST00000600523 KIF1AQ12756 1690 aa18.29■□□□□ 0.52
SRRM1-223ENST00000600523 FOXO3O43524 673 aa18.29■□□□□ 0.52
SRRM1-223ENST00000600523 PSME1Q06323 249 aa18.29■□□□□ 0.52
SRRM1-223ENST00000600523 JCADQ9P266 1359 aa18.29■□□□□ 0.52
SRRM1-223ENST00000600523 SBNO2Q9Y2G9 1366 aa18.29■□□□□ 0.52
SRRM1-223ENST00000600523 NGDNQ8NEJ9 315 aaKnown RBP18.28■□□□□ 0.52
SRRM1-223ENST00000600523 CCDC61Q9Y6R9 512 aa18.28■□□□□ 0.52
SRRM1-223ENST00000600523 USP47Q96K76 1375 aa18.28■□□□□ 0.52
SRRM1-223ENST00000600523 NHSL1Q5SYE7 1610 aa18.27■□□□□ 0.51
SRRM1-223ENST00000600523 PMFBP1Q8TBY8 1022 aa18.26■□□□□ 0.51
SRRM1-223ENST00000600523 ST20-MTHFSA0A0A6YYL1 179 aa18.25■□□□□ 0.51
SRRM1-223ENST00000600523 DDX17Q92841 729 aaKnown RBP18.25■□□□□ 0.51
SRRM1-223ENST00000600523 CABP2Q9NPB3 220 aa18.25■□□□□ 0.51
SRRM1-223ENST00000600523 ITSN1Q15811 1721 aa18.25■□□□□ 0.51
SRRM1-223ENST00000600523 SOS2Q07890 1332 aaPredicted RBP18.24■□□□□ 0.51
SRRM1-223ENST00000600523 COL16A1Q07092 1604 aaPredicted RBP18.24■□□□□ 0.51
SRRM1-223ENST00000600523 KRT28Q7Z3Y7 464 aa18.24■□□□□ 0.51
SRRM1-223ENST00000600523 PRR36Q9H6K5 1346 aa18.23■□□□□ 0.51
SRRM1-223ENST00000600523 ATP7BP35670 1465 aa18.23■□□□□ 0.51
SRRM1-223ENST00000600523 ATAD2Q6PL18 1390 aa18.23■□□□□ 0.51
SRRM1-223ENST00000600523 SPATA31A6Q5VVP1 1343 aa18.23■□□□□ 0.51
SRRM1-223ENST00000600523 EIF4G2P78344 907 aaKnown RBP eCLIP18.22■□□□□ 0.51
SRRM1-223ENST00000600523 TMF1P82094 1093 aa18.22■□□□□ 0.51
SRRM1-223ENST00000600523 XPCQ01831 940 aaPredicted RBP18.22■□□□□ 0.51
SRRM1-223ENST00000600523 CDCA8Q53HL2 280 aa18.22■□□□□ 0.51
SRRM1-223ENST00000600523 USP32Q8NFA0 1604 aa18.22■□□□□ 0.51
SRRM1-223ENST00000600523 RGPD8O14715 1765 aaPredicted RBP18.21■□□□□ 0.51
SRRM1-223ENST00000600523 PPIP5K1Q6PFW1 1433 aa18.21■□□□□ 0.51
SRRM1-223ENST00000600523 PLEKHG3A1L390 1219 aa18.19■□□□□ 0.5
SRRM1-223ENST00000600523 LMOD2Q6P5Q4 547 aa18.19■□□□□ 0.5
SRRM1-223ENST00000600523 PUS7Q96PZ0 661 aaKnown RBP18.19■□□□□ 0.5
SRRM1-223ENST00000600523 PXDNQ92626 1479 aa18.19■□□□□ 0.5
SRRM1-223ENST00000600523 MEX3CQ5U5Q3 659 aaKnown RBP18.18■□□□□ 0.5
SRRM1-223ENST00000600523 ACEP12821 1306 aa18.18■□□□□ 0.5
SRRM1-223ENST00000600523 SBNO1A3KN83 1393 aa18.17■□□□□ 0.5
SRRM1-223ENST00000600523 PAK3O75914 559 aaPredicted RBP18.17■□□□□ 0.5
SRRM1-223ENST00000600523 PHF23Q9BUL5 403 aaPredicted RBP18.17■□□□□ 0.5
SRRM1-223ENST00000600523 CABP1Q9NZU7 370 aa18.17■□□□□ 0.5
SRRM1-223ENST00000600523 ARHGEF10O15013 1369 aa18.17■□□□□ 0.5
SRRM1-223ENST00000600523 SHPRHQ149N8 1683 aa18.16■□□□□ 0.5
SRRM1-223ENST00000600523 HAP1P54257 671 aaPredicted RBP18.16■□□□□ 0.5
SRRM1-223ENST00000600523 TMC1Q8TDI8 760 aa18.16■□□□□ 0.5
SRRM1-223ENST00000600523 TESK2Q96S53 571 aa18.16■□□□□ 0.5
SRRM1-223ENST00000600523 SPATA31A3Q5VYP0 1347 aa18.16■□□□□ 0.5
SRRM1-223ENST00000600523 POLR3AO14802 1390 aaPredicted RBP18.16■□□□□ 0.5
SRRM1-223ENST00000600523 PNPLA6Q8IY17 1366 aa18.16■□□□□ 0.5
SRRM1-223ENST00000600523 NUTM2BA6NNL0 878 aaPredicted RBP18.15■□□□□ 0.5
SRRM1-223ENST00000600523 NUTM2EB1AL46 878 aaPredicted RBP18.15■□□□□ 0.5
SRRM1-223ENST00000600523 NUTM2AQ8IVF1 878 aaPredicted RBP18.15■□□□□ 0.5
SRRM1-223ENST00000600523 ZNF692Q9BU19 519 aaPredicted RBP18.15■□□□□ 0.5
SRRM1-223ENST00000600523 TNS3Q68CZ2 1445 aa18.15■□□□□ 0.5
SRRM1-223ENST00000600523 TOPAZ1Q8N9V7 1692 aa18.14■□□□□ 0.49
SRRM1-223ENST00000600523 BRD4O60885 1362 aaPredicted RBP18.14■□□□□ 0.49
SRRM1-223ENST00000600523 HDGFL2Q7Z4V5 671 aaPredicted RBP18.13■□□□□ 0.49
SRRM1-223ENST00000600523 TERF2IPQ9NYB0 399 aa18.13■□□□□ 0.49
SRRM1-223ENST00000600523 NINLQ9Y2I6 1382 aa18.13■□□□□ 0.49
SRRM1-223ENST00000600523 DISP3Q9P2K9 1392 aa18.12■□□□□ 0.49
SRRM1-223ENST00000600523 MED1Q15648 1581 aaPredicted RBP18.12■□□□□ 0.49
SRRM1-223ENST00000600523 HSPA5P11021 654 aaKnown RBP18.11■□□□□ 0.49
SRRM1-223ENST00000600523 KTN1Q86UP2 1357 aaKnown RBP18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 133.3 ms