RNA–Protein interactions for RNA: ENST00000600396.1

VAV1-208, Transcript of vav guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene VAV1, Length 689 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAV1-208ENST00000600396 VGFO15240 615 aaPredicted RBP22.41■■□□□ 1.18
VAV1-208ENST00000600396 DEFB132Q7Z7B7 95 aa22.41■■□□□ 1.18
VAV1-208ENST00000600396 MYOM2P54296 1465 aa22.4■■□□□ 1.18
VAV1-208ENST00000600396 COL22A1Q8NFW1 1626 aaPredicted RBP22.39■■□□□ 1.18
VAV1-208ENST00000600396 FOXO3O43524 673 aa22.39■■□□□ 1.17
VAV1-208ENST00000600396 XPCQ01831 940 aaPredicted RBP22.39■■□□□ 1.17
VAV1-208ENST00000600396 UNC5CLQ8IV45 518 aa22.39■■□□□ 1.17
VAV1-208ENST00000600396 SPHKAPQ2M3C7 1700 aa22.37■■□□□ 1.17
VAV1-208ENST00000600396 LRPPRCP42704 1394 aaKnown RBP22.37■■□□□ 1.17
VAV1-208ENST00000600396 NEXMIFQ5QGS0 1516 aa22.36■■□□□ 1.17
VAV1-208ENST00000600396 HFM1A2PYH4 1435 aa22.35■■□□□ 1.17
VAV1-208ENST00000600396 RALGAPBQ86X10 1494 aa22.33■■□□□ 1.16
VAV1-208ENST00000600396 SEPT12Q8IYM1 358 aa22.32■■□□□ 1.16
VAV1-208ENST00000600396 HAP1P54257 671 aaPredicted RBP22.31■■□□□ 1.16
VAV1-208ENST00000600396 MARF1Q9Y4F3 1742 aaKnown RBP22.31■■□□□ 1.16
VAV1-208ENST00000600396 PXDNQ92626 1479 aa22.3■■□□□ 1.16
VAV1-208ENST00000600396 NUTM2FA1L443 756 aa22.3■■□□□ 1.16
VAV1-208ENST00000600396 CCDC9Q9Y3X0 531 aaKnown RBP22.3■■□□□ 1.16
VAV1-208ENST00000600396 CLTCL1P53675 1640 aa22.28■■□□□ 1.16
VAV1-208ENST00000600396 PSDA5PKW4 1024 aaPredicted RBP22.28■■□□□ 1.16
VAV1-208ENST00000600396 BAG6P46379 1132 aa22.27■■□□□ 1.16
VAV1-208ENST00000600396 KRT27Q7Z3Y8 459 aa22.27■■□□□ 1.16
VAV1-208ENST00000600396 RPGRIP1LQ68CZ1 1315 aa22.27■■□□□ 1.16
VAV1-208ENST00000600396 KIF1BO60333 1816 aa22.27■■□□□ 1.15
VAV1-208ENST00000600396 SLIT2O94813 1529 aa22.26■■□□□ 1.15
VAV1-208ENST00000600396 GLI3P10071 1580 aa22.26■■□□□ 1.15
VAV1-208ENST00000600396 PRAG1Q86YV5 1406 aa22.25■■□□□ 1.15
VAV1-208ENST00000600396 LRP5O75197 1615 aa22.25■■□□□ 1.15
VAV1-208ENST00000600396 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.25■■□□□ 1.15
VAV1-208ENST00000600396 A0A0G2JS52 829 aa22.24■■□□□ 1.15
VAV1-208ENST00000600396 HRCP23327 699 aa22.24■■□□□ 1.15
VAV1-208ENST00000600396 MYT1Q01538 1121 aa22.24■■□□□ 1.15
VAV1-208ENST00000600396 VPS72Q15906 364 aa22.24■■□□□ 1.15
VAV1-208ENST00000600396 SPATA31A3Q5VYP0 1347 aa22.24■■□□□ 1.15
VAV1-208ENST00000600396 STK26Q9P289 416 aa22.23■■□□□ 1.15
VAV1-208ENST00000600396 CDC42BPGQ6DT37 1551 aa22.22■■□□□ 1.15
VAV1-208ENST00000600396 PLEKHG5O94827 1062 aa22.22■■□□□ 1.15
VAV1-208ENST00000600396 KRT28Q7Z3Y7 464 aa22.22■■□□□ 1.15
VAV1-208ENST00000600396 BRWD3Q6RI45 1802 aa22.22■■□□□ 1.15
VAV1-208ENST00000600396 NAIPQ13075 1403 aa22.22■■□□□ 1.15
VAV1-208ENST00000600396 ONECUT3O60422 494 aaPredicted RBP22.21■■□□□ 1.15
VAV1-208ENST00000600396 WAPLQ7Z5K2 1190 aa22.2■■□□□ 1.14
VAV1-208ENST00000600396 PSME1Q06323 249 aa22.19■■□□□ 1.14
VAV1-208ENST00000600396 CCDC144AA2RUR9 1427 aa22.18■■□□□ 1.14
VAV1-208ENST00000600396 LMOD2Q6P5Q4 547 aa22.18■■□□□ 1.14
VAV1-208ENST00000600396 CABLES1Q8TDN4 633 aa22.17■■□□□ 1.14
VAV1-208ENST00000600396 USP32Q8NFA0 1604 aa22.14■■□□□ 1.14
VAV1-208ENST00000600396 EN1Q05925 392 aaPredicted RBP22.14■■□□□ 1.13
VAV1-208ENST00000600396 R3HDM1Q15032 1099 aaKnown RBP22.13■■□□□ 1.13
VAV1-208ENST00000600396 FAM98CQ17RN3 349 aaKnown RBP22.12■■□□□ 1.13
VAV1-208ENST00000600396 PHF8Q9UPP1 1060 aa22.11■■□□□ 1.13
VAV1-208ENST00000600396 FAM83GA6ND36 823 aa22.1■■□□□ 1.13
VAV1-208ENST00000600396 TNS3Q68CZ2 1445 aa22.1■■□□□ 1.13
VAV1-208ENST00000600396 ADGRF5Q8IZF2 1346 aa22.09■■□□□ 1.13
VAV1-208ENST00000600396 TMEM132EQ6IEE7 984 aa22.09■■□□□ 1.13
VAV1-208ENST00000600396 SLC4A1APQ9BWU0 796 aaKnown RBP22.09■■□□□ 1.13
VAV1-208ENST00000600396 KIF1AQ12756 1690 aa22.08■■□□□ 1.13
VAV1-208ENST00000600396 ABCC11Q96J66 1382 aa22.08■■□□□ 1.12
VAV1-208ENST00000600396 PPLO60437 1756 aa22.07■■□□□ 1.12
VAV1-208ENST00000600396 RGL3Q3MIN7 710 aa22.07■■□□□ 1.12
VAV1-208ENST00000600396 PLEKHH1Q9ULM0 1364 aa22.07■■□□□ 1.12
VAV1-208ENST00000600396 TECPR2O15040 1411 aa22.06■■□□□ 1.12
VAV1-208ENST00000600396 NWD2Q9ULI1 1742 aa22.06■■□□□ 1.12
VAV1-208ENST00000600396 PPARGC1BQ86YN6 1023 aaKnown RBP22.06■■□□□ 1.12
VAV1-208ENST00000600396 ARHGEF10O15013 1369 aa22.06■■□□□ 1.12
VAV1-208ENST00000600396 SBNO1A3KN83 1393 aa22.05■■□□□ 1.12
VAV1-208ENST00000600396 YY1P25490 414 aa22.05■■□□□ 1.12
VAV1-208ENST00000600396 FAM182BQ5T319 152 aa22.05■■□□□ 1.12
VAV1-208ENST00000600396 BTG4Q9NY30 223 aa22.05■■□□□ 1.12
VAV1-208ENST00000600396 PLCH1Q4KWH8 1693 aa22.04■■□□□ 1.12
VAV1-208ENST00000600396 RRBP1Q9P2E9 1410 aaKnown RBP22.03■■□□□ 1.12
VAV1-208ENST00000600396 FMN2Q9NZ56 1722 aa22.03■■□□□ 1.12
VAV1-208ENST00000600396 EZH2Q15910 746 aaKnown RBP22.01■■□□□ 1.11
VAV1-208ENST00000600396 SIRT1Q96EB6 747 aa22■■□□□ 1.11
VAV1-208ENST00000600396 ANKRD30BQ9BXX2 1392 aa21.99■■□□□ 1.11
VAV1-208ENST00000600396 PMFBP1Q8TBY8 1022 aa21.98■■□□□ 1.11
VAV1-208ENST00000600396 YTHDC2Q9H6S0 1430 aaKnown RBP21.97■■□□□ 1.11
VAV1-208ENST00000600396 RGPD1P0DJD0 1748 aa21.97■■□□□ 1.11
VAV1-208ENST00000600396 DCAF8L1A6NGE4 600 aa21.97■■□□□ 1.11
VAV1-208ENST00000600396 SAFB2Q14151 953 aaKnown RBP eCLIP21.96■■□□□ 1.11
VAV1-208ENST00000600396 NRXN1Q9ULB1 1477 aa21.96■■□□□ 1.11
VAV1-208ENST00000600396 TRIM37O94972 964 aa21.95■■□□□ 1.1
VAV1-208ENST00000600396 SPATA31A5Q5VU36 1347 aa21.95■■□□□ 1.1
VAV1-208ENST00000600396 SPATA31A7Q8IWB4 1347 aa21.95■■□□□ 1.1
VAV1-208ENST00000600396 DISP2A7MBM2 1401 aa21.95■■□□□ 1.1
VAV1-208ENST00000600396 RGPD8O14715 1765 aaPredicted RBP21.94■■□□□ 1.1
VAV1-208ENST00000600396 APBA3O96018 575 aa21.94■■□□□ 1.1
VAV1-208ENST00000600396 FAM196AQ6ZSG2 479 aa21.94■■□□□ 1.1
VAV1-208ENST00000600396 CAMKK2Q96RR4 588 aa21.94■■□□□ 1.1
VAV1-208ENST00000600396 KNDC1Q76NI1 1749 aa21.94■■□□□ 1.1
VAV1-208ENST00000600396 NBPF8Q3BBV2 869 aa21.92■■□□□ 1.1
VAV1-208ENST00000600396 NBPF14Q5TI25 921 aa21.92■■□□□ 1.1
VAV1-208ENST00000600396 POGKQ9P215 609 aa21.92■■□□□ 1.1
VAV1-208ENST00000600396 PPP1R1BQ9UD71 204 aaPredicted RBP21.92■■□□□ 1.1
VAV1-208ENST00000600396 GPRASP1Q5JY77 1395 aa21.91■■□□□ 1.1
VAV1-208ENST00000600396 DHX57Q6P158 1386 aaKnown RBP21.91■■□□□ 1.1
VAV1-208ENST00000600396 PRAM1Q96QH2 718 aa21.91■■□□□ 1.1
VAV1-208ENST00000600396 ABCA3Q99758 1704 aa21.91■■□□□ 1.1
VAV1-208ENST00000600396 IFT172Q9UG01 1749 aa21.9■■□□□ 1.1
VAV1-208ENST00000600396 PRDM11Q9NQV5 511 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms