RNA–Protein interactions for RNA: ENST00000600343.5

NFKB1-212, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2 BASIC

Gene NFKB1, Length 4,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-212ENST00000600343 SNX21Q969T3 373 aa12.08□□□□□ -0.48
NFKB1-212ENST00000600343 CUX1P39880 1505 aa12.08□□□□□ -0.48
NFKB1-212ENST00000600343 MCTP1Q6DN14 999 aa12.08□□□□□ -0.48
NFKB1-212ENST00000600343 MPHOSPH9Q99550 1183 aa12.08□□□□□ -0.48
NFKB1-212ENST00000600343 CTNNA3Q9UI47 895 aa12.08□□□□□ -0.48
NFKB1-212ENST00000600343 MYCBPQ99417 103 aaPredicted RBP12.07□□□□□ -0.48
NFKB1-212ENST00000600343 DDX41Q9UJV9 622 aaKnown RBP12.07□□□□□ -0.48
NFKB1-212ENST00000600343 PDZRN3Q9UPQ7 1066 aa12.07□□□□□ -0.48
NFKB1-212ENST00000600343 PRDM2Q13029 1718 aa12.07□□□□□ -0.48
NFKB1-212ENST00000600343 HECW1Q76N89 1606 aa12.07□□□□□ -0.48
NFKB1-212ENST00000600343 C17orf53Q8N3J3 647 aaPredicted RBP12.07□□□□□ -0.48
NFKB1-212ENST00000600343 RNF214Q8ND24 703 aa12.07□□□□□ -0.48
NFKB1-212ENST00000600343 TEX14Q8IWB6 1497 aa12.06□□□□□ -0.48
NFKB1-212ENST00000600343 MPNDQ8N594 471 aa12.06□□□□□ -0.48
NFKB1-212ENST00000600343 RRP7BPQ9NSQ0 103 aa12.06□□□□□ -0.48
NFKB1-212ENST00000600343 GOLGA2Q08379 1002 aa12.06□□□□□ -0.48
NFKB1-212ENST00000600343 PMFBP1Q8TBY8 1022 aa12.06□□□□□ -0.48
NFKB1-212ENST00000600343 INSRP06213 1382 aa12.06□□□□□ -0.48
NFKB1-212ENST00000600343 TMX1Q9H3N1 280 aa12.06□□□□□ -0.48
NFKB1-212ENST00000600343 TMED8Q6PL24 325 aaPredicted RBP12.05□□□□□ -0.48
NFKB1-212ENST00000600343 LRSAM1Q6UWE0 723 aa12.05□□□□□ -0.48
NFKB1-212ENST00000600343 KRT222Q8N1A0 295 aa12.05□□□□□ -0.48
NFKB1-212ENST00000600343 BCAR3O75815 825 aa12.05□□□□□ -0.48
NFKB1-212ENST00000600343 CLEC17AQ6ZS10 378 aa12.05□□□□□ -0.48
NFKB1-212ENST00000600343 SIRT1Q96EB6 747 aa12.05□□□□□ -0.48
NFKB1-212ENST00000600343 MORC2Q9Y6X9 1032 aaPredicted RBP12.05□□□□□ -0.48
NFKB1-212ENST00000600343 CTIFO43310 598 aaKnown RBP12.04□□□□□ -0.48
NFKB1-212ENST00000600343 RAD51AP2Q09MP3 1159 aa12.04□□□□□ -0.48
NFKB1-212ENST00000600343 CARD10Q9BWT7 1032 aa12.04□□□□□ -0.48
NFKB1-212ENST00000600343 RBM27Q9P2N5 1060 aaKnown RBP12.04□□□□□ -0.48
NFKB1-212ENST00000600343 RPRD2Q5VT52 1461 aaKnown RBP12.04□□□□□ -0.48
NFKB1-212ENST00000600343 KIF21AQ7Z4S6 1674 aa12.04□□□□□ -0.48
NFKB1-212ENST00000600343 COG6Q9Y2V7 657 aa12.04□□□□□ -0.48
NFKB1-212ENST00000600343 MTUS2Q5JR59 1369 aa12.04□□□□□ -0.48
NFKB1-212ENST00000600343 PARD3Q8TEW0 1356 aa12.04□□□□□ -0.48
NFKB1-212ENST00000600343 C14orf37Q86TY3 774 aa12.04□□□□□ -0.48
NFKB1-212ENST00000600343 SMC4Q9NTJ3 1288 aa12.04□□□□□ -0.48
NFKB1-212ENST00000600343 SYCE3A1L190 88 aa12.03□□□□□ -0.48
NFKB1-212ENST00000600343 NOP2P46087 812 aaKnown RBP12.03□□□□□ -0.48
NFKB1-212ENST00000600343 RASSF4Q9H2L5 321 aa12.03□□□□□ -0.48
NFKB1-212ENST00000600343 SPTLC3Q9NUV7 552 aa12.03□□□□□ -0.48
NFKB1-212ENST00000600343 THOC2Q8NI27 1593 aaKnown RBP12.03□□□□□ -0.48
NFKB1-212ENST00000600343 DHX16O60231 1041 aaKnown RBP12.03□□□□□ -0.48
NFKB1-212ENST00000600343 HNRNPH2P55795 449 aaKnown RBP12.03□□□□□ -0.48
NFKB1-212ENST00000600343 NCBP1Q09161 790 aaKnown RBP12.03□□□□□ -0.48
NFKB1-212ENST00000600343 NCAPGQ9BPX3 1015 aa12.03□□□□□ -0.48
NFKB1-212ENST00000600343 KIAA1107Q9UPP5 1409 aa12.03□□□□□ -0.48
NFKB1-212ENST00000600343 GRIPAP1Q4V328 841 aa12.02□□□□□ -0.48
NFKB1-212ENST00000600343 TTC12Q9H892 705 aaPredicted RBP12.02□□□□□ -0.48
NFKB1-212ENST00000600343 CTR9Q6PD62 1173 aa12.02□□□□□ -0.49
NFKB1-212ENST00000600343 LMBRD1Q9NUN5 540 aa12.02□□□□□ -0.49
NFKB1-212ENST00000600343 PLEKHH1Q9ULM0 1364 aa12.02□□□□□ -0.49
NFKB1-212ENST00000600343 SMARCA4P51532 1647 aa12.01□□□□□ -0.49
NFKB1-212ENST00000600343 BRPF1P55201 1214 aaPredicted RBP12.01□□□□□ -0.49
NFKB1-212ENST00000600343 PDE3AQ14432 1141 aa12.01□□□□□ -0.49
NFKB1-212ENST00000600343 CT47A1Q5JQC4 288 aaPredicted RBP12.01□□□□□ -0.49
NFKB1-212ENST00000600343 KIF18AQ8NI77 898 aa12.01□□□□□ -0.49
NFKB1-212ENST00000600343 ICE2Q659A1 982 aa12.01□□□□□ -0.49
NFKB1-212ENST00000600343 CREBRFQ8IUR6 639 aa12.01□□□□□ -0.49
NFKB1-212ENST00000600343 PANK1Q8TE04 598 aa12.01□□□□□ -0.49
NFKB1-212ENST00000600343 CEP83Q9Y592 693 aa12.01□□□□□ -0.49
NFKB1-212ENST00000600343 K7ELQ4 463 aaPredicted RBP12□□□□□ -0.49
NFKB1-212ENST00000600343 CHIC2Q9UKJ5 165 aa12□□□□□ -0.49
NFKB1-212ENST00000600343 GPATCH11Q8N954 259 aa12□□□□□ -0.49
NFKB1-212ENST00000600343 PCF11O94913 1555 aaKnown RBP12□□□□□ -0.49
NFKB1-212ENST00000600343 ARHGAP31Q2M1Z3 1444 aa12□□□□□ -0.49
NFKB1-212ENST00000600343 NPC1L1Q9UHC9 1359 aa12□□□□□ -0.49
NFKB1-212ENST00000600343 TOP2BQ02880 1626 aa11.99□□□□□ -0.49
NFKB1-212ENST00000600343 SLFN5Q08AF3 891 aa11.99□□□□□ -0.49
NFKB1-212ENST00000600343 PRPF40AO75400 957 aaKnown RBP11.99□□□□□ -0.49
NFKB1-212ENST00000600343 PHF14O94880 888 aa11.99□□□□□ -0.49
NFKB1-212ENST00000600343 SPINK5Q9NQ38 1064 aaPredicted RBP11.99□□□□□ -0.49
NFKB1-212ENST00000600343 SYCP1Q15431 976 aa11.99□□□□□ -0.49
NFKB1-212ENST00000600343 SLC26A8Q96RN1 970 aa11.99□□□□□ -0.49
NFKB1-212ENST00000600343 ADAMTS8Q9UP79 889 aa11.99□□□□□ -0.49
NFKB1-212ENST00000600343 ANKRD30BQ9BXX2 1392 aa11.98□□□□□ -0.49
NFKB1-212ENST00000600343 CCDC172P0C7W6 258 aa11.98□□□□□ -0.49
NFKB1-212ENST00000600343 EGFL6Q8IUX8 553 aa11.98□□□□□ -0.49
NFKB1-212ENST00000600343 GPT2Q8TD30 523 aa11.98□□□□□ -0.49
NFKB1-212ENST00000600343 TOMM22Q9NS69 142 aa11.98□□□□□ -0.49
NFKB1-212ENST00000600343 GOLGA6L6A8MZA4 724 aa11.98□□□□□ -0.49
NFKB1-212ENST00000600343 RWDD1Q9H446 243 aaPredicted RBP11.98□□□□□ -0.49
NFKB1-212ENST00000600343 TMEM63CQ9P1W3 806 aa11.98□□□□□ -0.49
NFKB1-212ENST00000600343 KDM5CP41229 1560 aa11.98□□□□□ -0.49
NFKB1-212ENST00000600343 CYP2C19P33261 490 aa11.97□□□□□ -0.49
NFKB1-212ENST00000600343 GAS2L2Q8NHY3 880 aa11.97□□□□□ -0.49
NFKB1-212ENST00000600343 TSPY26PQ9H489 355 aa11.97□□□□□ -0.49
NFKB1-212ENST00000600343 WDR43Q15061 677 aaKnown RBP eCLIP11.97□□□□□ -0.49
NFKB1-212ENST00000600343 BRMS1Q9HCU9 246 aa11.97□□□□□ -0.49
NFKB1-212ENST00000600343 PCDHB15Q9Y5E8 787 aa11.97□□□□□ -0.49
NFKB1-212ENST00000600343 NKTRP30414 1462 aaKnown RBP11.96□□□□□ -0.49
NFKB1-212ENST00000600343 CD2BP2O95400 341 aaKnown RBP11.96□□□□□ -0.49
NFKB1-212ENST00000600343 NUCB2P80303 420 aa11.96□□□□□ -0.49
NFKB1-212ENST00000600343 GUCY2CP25092 1073 aa11.96□□□□□ -0.5
NFKB1-212ENST00000600343 SRPK2P78362 688 aaKnown RBP11.96□□□□□ -0.5
NFKB1-212ENST00000600343 NOL10Q9BSC4 688 aaKnown RBP11.96□□□□□ -0.5
NFKB1-212ENST00000600343 ZNF521Q96K83 1311 aa11.96□□□□□ -0.5
NFKB1-212ENST00000600343 GYS2P54840 703 aa11.95□□□□□ -0.5
NFKB1-212ENST00000600343 KIF27Q86VH2 1401 aa11.95□□□□□ -0.5
NFKB1-212ENST00000600343 C10orf67Q8IYJ2 551 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms