RNA–Protein interactions for RNA: ENST00000600296.5

U2AF1L4-220, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, humanhuman

TSL 3

Gene U2AF1L4, Length 525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4-220ENST00000600296 TMF1P82094 1093 aa22.92■■□□□ 1.26
U2AF1L4-220ENST00000600296 BCANQ96GW7 911 aa22.92■■□□□ 1.26
U2AF1L4-220ENST00000600296 STK26Q9P289 416 aa22.9■■□□□ 1.26
U2AF1L4-220ENST00000600296 ROBO2Q9HCK4 1378 aa22.89■■□□□ 1.26
U2AF1L4-220ENST00000600296 PLEKHH1Q9ULM0 1364 aa22.89■■□□□ 1.25
U2AF1L4-220ENST00000600296 STRCP1A6NGW2 1772 aa22.88■■□□□ 1.25
U2AF1L4-220ENST00000600296 DIEXFQ68CQ4 756 aaKnown RBP22.87■■□□□ 1.25
U2AF1L4-220ENST00000600296 PRAM1Q96QH2 718 aa22.87■■□□□ 1.25
U2AF1L4-220ENST00000600296 NALCNQ8IZF0 1738 aa22.85■■□□□ 1.25
U2AF1L4-220ENST00000600296 NKTRP30414 1462 aaKnown RBP22.85■■□□□ 1.25
U2AF1L4-220ENST00000600296 CDCA8Q53HL2 280 aa22.84■■□□□ 1.25
U2AF1L4-220ENST00000600296 PUS7Q96PZ0 661 aaKnown RBP22.84■■□□□ 1.25
U2AF1L4-220ENST00000600296 AMOTL2Q9Y2J4 779 aa22.83■■□□□ 1.25
U2AF1L4-220ENST00000600296 DDX10Q13206 875 aaKnown RBP22.82■■□□□ 1.24
U2AF1L4-220ENST00000600296 POGKQ9P215 609 aa22.82■■□□□ 1.24
U2AF1L4-220ENST00000600296 TOPAZ1Q8N9V7 1692 aa22.81■■□□□ 1.24
U2AF1L4-220ENST00000600296 WAPLQ7Z5K2 1190 aa22.8■■□□□ 1.24
U2AF1L4-220ENST00000600296 EVC2Q86UK5 1308 aa22.8■■□□□ 1.24
U2AF1L4-220ENST00000600296 CDC42BPGQ6DT37 1551 aa22.78■■□□□ 1.24
U2AF1L4-220ENST00000600296 FMN2Q9NZ56 1722 aa22.78■■□□□ 1.24
U2AF1L4-220ENST00000600296 KCNA6P17658 529 aa22.77■■□□□ 1.24
U2AF1L4-220ENST00000600296 ITSN1Q15811 1721 aa22.77■■□□□ 1.23
U2AF1L4-220ENST00000600296 SAFB2Q14151 953 aaKnown RBP eCLIP22.76■■□□□ 1.23
U2AF1L4-220ENST00000600296 MINK1Q8N4C8 1332 aaPredicted RBP22.76■■□□□ 1.23
U2AF1L4-220ENST00000600296 XIRP1Q702N8 1843 aaKnown RBP22.75■■□□□ 1.23
U2AF1L4-220ENST00000600296 USP32Q8NFA0 1604 aa22.75■■□□□ 1.23
U2AF1L4-220ENST00000600296 UBAP1LF5GYI3 381 aa22.74■■□□□ 1.23
U2AF1L4-220ENST00000600296 ATAD2Q6PL18 1390 aa22.74■■□□□ 1.23
U2AF1L4-220ENST00000600296 NINLQ9Y2I6 1382 aa22.74■■□□□ 1.23
U2AF1L4-220ENST00000600296 IQSEC2Q5JU85 1478 aa22.73■■□□□ 1.23
U2AF1L4-220ENST00000600296 ATP7BP35670 1465 aa22.73■■□□□ 1.23
U2AF1L4-220ENST00000600296 ADGRL3Q9HAR2 1447 aa22.72■■□□□ 1.23
U2AF1L4-220ENST00000600296 AKAP12Q02952 1782 aa22.71■■□□□ 1.23
U2AF1L4-220ENST00000600296 POLR3GLQ9BT43 218 aa22.71■■□□□ 1.23
U2AF1L4-220ENST00000600296 RGPD8O14715 1765 aaPredicted RBP22.7■■□□□ 1.22
U2AF1L4-220ENST00000600296 WASLO00401 505 aaPredicted RBP22.69■■□□□ 1.22
U2AF1L4-220ENST00000600296 CDK19Q9BWU1 502 aa22.68■■□□□ 1.22
U2AF1L4-220ENST00000600296 MON2Q7Z3U7 1717 aa22.68■■□□□ 1.22
U2AF1L4-220ENST00000600296 NCOA3Q9Y6Q9 1424 aa22.67■■□□□ 1.22
U2AF1L4-220ENST00000600296 CD163L1Q9NR16 1453 aa22.66■■□□□ 1.22
U2AF1L4-220ENST00000600296 CABP2Q9NPB3 220 aa22.66■■□□□ 1.22
U2AF1L4-220ENST00000600296 ANKARQ7Z5J8 1434 aa22.65■■□□□ 1.22
U2AF1L4-220ENST00000600296 SRPK2P78362 688 aaKnown RBP22.64■■□□□ 1.21
U2AF1L4-220ENST00000600296 ANKRD36BQ8N2N9 1353 aa22.63■■□□□ 1.21
U2AF1L4-220ENST00000600296 LRRC7Q96NW7 1537 aa22.63■■□□□ 1.21
U2AF1L4-220ENST00000600296 PER1O15534 1290 aaPredicted RBP22.63■■□□□ 1.21
U2AF1L4-220ENST00000600296 PIP4K2BP78356 416 aa22.62■■□□□ 1.21
U2AF1L4-220ENST00000600296 ANKRD26Q9UPS8 1709 aa22.62■■□□□ 1.21
U2AF1L4-220ENST00000600296 DCCP43146 1447 aa22.61■■□□□ 1.21
U2AF1L4-220ENST00000600296 NRKQ7Z2Y5 1582 aa22.61■■□□□ 1.21
U2AF1L4-220ENST00000600296 PANK3Q9H999 370 aa22.61■■□□□ 1.21
U2AF1L4-220ENST00000600296 PRR36Q9H6K5 1346 aa22.6■■□□□ 1.21
U2AF1L4-220ENST00000600296 KIF20BQ96Q89 1820 aa22.6■■□□□ 1.21
U2AF1L4-220ENST00000600296 RBM33Q96EV2 1170 aaKnown RBP22.6■■□□□ 1.21
U2AF1L4-220ENST00000600296 TOM1O60784 492 aa22.59■■□□□ 1.21
U2AF1L4-220ENST00000600296 NPC1L1Q9UHC9 1359 aa22.59■■□□□ 1.21
U2AF1L4-220ENST00000600296 SCAF1Q9H7N4 1312 aaKnown RBP22.58■■□□□ 1.21
U2AF1L4-220ENST00000600296 PPIP5K1Q6PFW1 1433 aa22.58■■□□□ 1.21
U2AF1L4-220ENST00000600296 A0A1W2PP64 1363 aa22.58■■□□□ 1.21
U2AF1L4-220ENST00000600296 CPSF1Q10570 1443 aaKnown RBP22.57■■□□□ 1.2
U2AF1L4-220ENST00000600296 SLC12A5Q9H2X9 1139 aa22.57■■□□□ 1.2
U2AF1L4-220ENST00000600296 TMEM94Q12767 1356 aa22.56■■□□□ 1.2
U2AF1L4-220ENST00000600296 MIER1Q8N108 512 aa22.56■■□□□ 1.2
U2AF1L4-220ENST00000600296 NUDT16Q96DE0 195 aaKnown RBP22.56■■□□□ 1.2
U2AF1L4-220ENST00000600296 KTN1Q86UP2 1357 aaKnown RBP22.55■■□□□ 1.2
U2AF1L4-220ENST00000600296 PROSER2Q86WR7 435 aaPredicted RBP22.55■■□□□ 1.2
U2AF1L4-220ENST00000600296 NSD3Q9BZ95 1437 aa22.55■■□□□ 1.2
U2AF1L4-220ENST00000600296 ANP32CO43423 234 aa22.54■■□□□ 1.2
U2AF1L4-220ENST00000600296 CCDC61Q9Y6R9 512 aa22.54■■□□□ 1.2
U2AF1L4-220ENST00000600296 KIF1AQ12756 1690 aa22.53■■□□□ 1.2
U2AF1L4-220ENST00000600296 TMC1Q8TDI8 760 aa22.53■■□□□ 1.2
U2AF1L4-220ENST00000600296 PARD3Q8TEW0 1356 aa22.52■■□□□ 1.2
U2AF1L4-220ENST00000600296 HSPA1LP34931 641 aa22.52■■□□□ 1.2
U2AF1L4-220ENST00000600296 CARD14Q9BXL6 1004 aa22.52■■□□□ 1.2
U2AF1L4-220ENST00000600296 PRKRIP1Q9H875 184 aaPredicted RBP22.52■■□□□ 1.2
U2AF1L4-220ENST00000600296 AMER1Q5JTC6 1135 aaPredicted RBP22.51■■□□□ 1.19
U2AF1L4-220ENST00000600296 PLEKHG3A1L390 1219 aa22.5■■□□□ 1.19
U2AF1L4-220ENST00000600296 CABP1Q9NZU7 370 aa22.5■■□□□ 1.19
U2AF1L4-220ENST00000600296 POLR3AO14802 1390 aaPredicted RBP22.5■■□□□ 1.19
U2AF1L4-220ENST00000600296 TERF2IPQ9NYB0 399 aa22.49■■□□□ 1.19
U2AF1L4-220ENST00000600296 KNSTRNQ9Y448 316 aa22.49■■□□□ 1.19
U2AF1L4-220ENST00000600296 USP54Q70EL1 1684 aa22.49■■□□□ 1.19
U2AF1L4-220ENST00000600296 EDC4Q6P2E9 1401 aaKnown RBP22.48■■□□□ 1.19
U2AF1L4-220ENST00000600296 C19orf44Q9H6X5 657 aa22.48■■□□□ 1.19
U2AF1L4-220ENST00000600296 NSD2O96028 1365 aa22.48■■□□□ 1.19
U2AF1L4-220ENST00000600296 MST1RQ04912 1400 aa22.48■■□□□ 1.19
U2AF1L4-220ENST00000600296 HDGFL2Q7Z4V5 671 aaPredicted RBP22.46■■□□□ 1.19
U2AF1L4-220ENST00000600296 MSH6P52701 1360 aa22.45■■□□□ 1.18
U2AF1L4-220ENST00000600296 C1orf167Q5SNV9 1468 aa22.45■■□□□ 1.18
U2AF1L4-220ENST00000600296 CCER2I3L3R5 266 aa22.44■■□□□ 1.18
U2AF1L4-220ENST00000600296 USP6P35125 1406 aa22.44■■□□□ 1.18
U2AF1L4-220ENST00000600296 RALBP1Q15311 655 aa22.44■■□□□ 1.18
U2AF1L4-220ENST00000600296 SSH2Q76I76 1423 aa22.44■■□□□ 1.18
U2AF1L4-220ENST00000600296 CGNL1Q0VF96 1302 aa22.42■■□□□ 1.18
U2AF1L4-220ENST00000600296 C14orf37Q86TY3 774 aa22.42■■□□□ 1.18
U2AF1L4-220ENST00000600296 TRPM3Q9HCF6 1732 aaPredicted RBP22.42■■□□□ 1.18
U2AF1L4-220ENST00000600296 ACEP12821 1306 aa22.41■■□□□ 1.18
U2AF1L4-220ENST00000600296 MARF1Q9Y4F3 1742 aaKnown RBP22.41■■□□□ 1.18
U2AF1L4-220ENST00000600296 NUTM2FA1L443 756 aa22.41■■□□□ 1.18
U2AF1L4-220ENST00000600296 ZNF692Q9BU19 519 aaPredicted RBP22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms