RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 TESK2Q96S53 571 aa17.23■□□□□ 0.35
TGFB1-204ENST00000600196 ADGRL3Q9HAR2 1447 aa17.22■□□□□ 0.35
TGFB1-204ENST00000600196 ARHGEF28Q8N1W1 1705 aaKnown RBP17.22■□□□□ 0.35
TGFB1-204ENST00000600196 EVC2Q86UK5 1308 aa17.21■□□□□ 0.35
TGFB1-204ENST00000600196 HSPA5P11021 654 aaKnown RBP17.21■□□□□ 0.35
TGFB1-204ENST00000600196 TMF1P82094 1093 aa17.21■□□□□ 0.35
TGFB1-204ENST00000600196 CADPS2Q86UW7 1296 aa17.21■□□□□ 0.35
TGFB1-204ENST00000600196 STRCP1A6NGW2 1772 aa17.2■□□□□ 0.34
TGFB1-204ENST00000600196 MSH6P52701 1360 aa17.2■□□□□ 0.34
TGFB1-204ENST00000600196 ADGRB2O60241 1585 aa17.19■□□□□ 0.34
TGFB1-204ENST00000600196 WASLO00401 505 aaPredicted RBP17.19■□□□□ 0.34
TGFB1-204ENST00000600196 PLEKHH1Q9ULM0 1364 aa17.18■□□□□ 0.34
TGFB1-204ENST00000600196 ATF3P18847 181 aa17.17■□□□□ 0.34
TGFB1-204ENST00000600196 C14orf37Q86TY3 774 aa17.17■□□□□ 0.34
TGFB1-204ENST00000600196 CDC42BPGQ6DT37 1551 aa17.16■□□□□ 0.34
TGFB1-204ENST00000600196 ANKARQ7Z5J8 1434 aa17.16■□□□□ 0.34
TGFB1-204ENST00000600196 CERKQ8TCT0 537 aa17.16■□□□□ 0.34
TGFB1-204ENST00000600196 CDK19Q9BWU1 502 aa17.14■□□□□ 0.33
TGFB1-204ENST00000600196 MINK1Q8N4C8 1332 aaPredicted RBP17.14■□□□□ 0.33
TGFB1-204ENST00000600196 ATAD2Q6PL18 1390 aa17.14■□□□□ 0.33
TGFB1-204ENST00000600196 NINLQ9Y2I6 1382 aa17.14■□□□□ 0.33
TGFB1-204ENST00000600196 QRICH2Q9H0J4 1663 aa17.13■□□□□ 0.33
TGFB1-204ENST00000600196 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.13■□□□□ 0.33
TGFB1-204ENST00000600196 TOM1O60784 492 aa17.13■□□□□ 0.33
TGFB1-204ENST00000600196 SAFB2Q14151 953 aaKnown RBP eCLIP17.12■□□□□ 0.33
TGFB1-204ENST00000600196 CCDC61Q9Y6R9 512 aa17.12■□□□□ 0.33
TGFB1-204ENST00000600196 PLEKHG3A1L390 1219 aa17.09■□□□□ 0.33
TGFB1-204ENST00000600196 SRPK2P78362 688 aaKnown RBP17.09■□□□□ 0.33
TGFB1-204ENST00000600196 SLAIN2Q9P270 581 aa17.09■□□□□ 0.33
TGFB1-204ENST00000600196 TULP4Q9NRJ4 1543 aa17.09■□□□□ 0.33
TGFB1-204ENST00000600196 XIRP1Q702N8 1843 aaKnown RBP17.09■□□□□ 0.33
TGFB1-204ENST00000600196 NALCNQ8IZF0 1738 aa17.08■□□□□ 0.32
TGFB1-204ENST00000600196 NUDT16Q96DE0 195 aaKnown RBP17.08■□□□□ 0.32
TGFB1-204ENST00000600196 HIRIP3Q9BW71 556 aaPredicted RBP17.08■□□□□ 0.32
TGFB1-204ENST00000600196 MST1RQ04912 1400 aa17.06■□□□□ 0.32
TGFB1-204ENST00000600196 BRD4O60885 1362 aaPredicted RBP17.06■□□□□ 0.32
TGFB1-204ENST00000600196 RBM33Q96EV2 1170 aaKnown RBP17.06■□□□□ 0.32
TGFB1-204ENST00000600196 ZNF692Q9BU19 519 aaPredicted RBP17.06■□□□□ 0.32
TGFB1-204ENST00000600196 C1orf167Q5SNV9 1468 aa17.05■□□□□ 0.32
TGFB1-204ENST00000600196 FMN2Q9NZ56 1722 aa17.05■□□□□ 0.32
TGFB1-204ENST00000600196 DISP3Q9P2K9 1392 aa17.04■□□□□ 0.32
TGFB1-204ENST00000600196 ZNF316A6NFI3 1004 aaPredicted RBP17.04■□□□□ 0.32
TGFB1-204ENST00000600196 CABP2Q9NPB3 220 aa17.04■□□□□ 0.32
TGFB1-204ENST00000600196 ATP7BP35670 1465 aa17.03■□□□□ 0.32
TGFB1-204ENST00000600196 CCDC7Q96M83 1385 aa17.02■□□□□ 0.32
TGFB1-204ENST00000600196 TERF2IPQ9NYB0 399 aa17.02■□□□□ 0.32
TGFB1-204ENST00000600196 PHF8Q9UPP1 1060 aa17.02■□□□□ 0.32
TGFB1-204ENST00000600196 KIF7Q2M1P5 1343 aa17.01■□□□□ 0.31
TGFB1-204ENST00000600196 PRR36Q9H6K5 1346 aa17.01■□□□□ 0.31
TGFB1-204ENST00000600196 POLR3AO14802 1390 aaPredicted RBP17.01■□□□□ 0.31
TGFB1-204ENST00000600196 C11orf95C9JLR9 678 aaPredicted RBP17■□□□□ 0.31
TGFB1-204ENST00000600196 ESCO1Q5FWF5 840 aa17■□□□□ 0.31
TGFB1-204ENST00000600196 WASHC2AQ641Q2 1341 aa16.99■□□□□ 0.31
TGFB1-204ENST00000600196 UBAP1LF5GYI3 381 aa16.99■□□□□ 0.31
TGFB1-204ENST00000600196 CABP1Q9NZU7 370 aa16.99■□□□□ 0.31
TGFB1-204ENST00000600196 ITSN1Q15811 1721 aa16.99■□□□□ 0.31
TGFB1-204ENST00000600196 NPHP3Q7Z494 1330 aa16.98■□□□□ 0.31
TGFB1-204ENST00000600196 PPIP5K1Q6PFW1 1433 aa16.98■□□□□ 0.31
TGFB1-204ENST00000600196 BRINP3Q76B58 766 aa16.98■□□□□ 0.31
TGFB1-204ENST00000600196 HDGFL2Q7Z4V5 671 aaPredicted RBP16.98■□□□□ 0.31
TGFB1-204ENST00000600196 KIF1AQ12756 1690 aa16.97■□□□□ 0.31
TGFB1-204ENST00000600196 PSME1Q06323 249 aa16.97■□□□□ 0.31
TGFB1-204ENST00000600196 ANKRD36BQ8N2N9 1353 aa16.97■□□□□ 0.31
TGFB1-204ENST00000600196 CPSF1Q10570 1443 aaKnown RBP16.96■□□□□ 0.31
TGFB1-204ENST00000600196 USP32Q8NFA0 1604 aa16.96■□□□□ 0.31
TGFB1-204ENST00000600196 TOPAZ1Q8N9V7 1692 aa16.95■□□□□ 0.3
TGFB1-204ENST00000600196 NGDNQ8NEJ9 315 aaKnown RBP16.95■□□□□ 0.3
TGFB1-204ENST00000600196 TMC1Q8TDI8 760 aa16.95■□□□□ 0.3
TGFB1-204ENST00000600196 ORAI2Q96SN7 254 aa16.95■□□□□ 0.3
TGFB1-204ENST00000600196 SLC12A5Q9H2X9 1139 aa16.95■□□□□ 0.3
TGFB1-204ENST00000600196 ACEP12821 1306 aa16.95■□□□□ 0.3
TGFB1-204ENST00000600196 NUTM2FA1L443 756 aa16.93■□□□□ 0.3
TGFB1-204ENST00000600196 SOS2Q07890 1332 aaPredicted RBP16.93■□□□□ 0.3
TGFB1-204ENST00000600196 SBNO1A3KN83 1393 aa16.92■□□□□ 0.3
TGFB1-204ENST00000600196 TTC21AQ8NDW8 1320 aa16.92■□□□□ 0.3
TGFB1-204ENST00000600196 EDC4Q6P2E9 1401 aaKnown RBP16.9■□□□□ 0.3
TGFB1-204ENST00000600196 FOXO3O43524 673 aa16.9■□□□□ 0.3
TGFB1-204ENST00000600196 PMFBP1Q8TBY8 1022 aa16.9■□□□□ 0.3
TGFB1-204ENST00000600196 PANK3Q9H999 370 aa16.9■□□□□ 0.3
TGFB1-204ENST00000600196 KTN1Q86UP2 1357 aaKnown RBP16.89■□□□□ 0.3
TGFB1-204ENST00000600196 AHDC1Q5TGY3 1603 aaPredicted RBP16.89■□□□□ 0.29
TGFB1-204ENST00000600196 USP6P35125 1406 aa16.89■□□□□ 0.29
TGFB1-204ENST00000600196 SSH2Q76I76 1423 aa16.89■□□□□ 0.29
TGFB1-204ENST00000600196 CD163L1Q9NR16 1453 aa16.89■□□□□ 0.29
TGFB1-204ENST00000600196 KRT28Q7Z3Y7 464 aa16.89■□□□□ 0.29
TGFB1-204ENST00000600196 FBXO41Q8TF61 875 aa16.89■□□□□ 0.29
TGFB1-204ENST00000600196 LRRC59Q96AG4 307 aaKnown RBP16.89■□□□□ 0.29
TGFB1-204ENST00000600196 NPC1L1Q9UHC9 1359 aa16.89■□□□□ 0.29
TGFB1-204ENST00000600196 RGPD8O14715 1765 aaPredicted RBP16.88■□□□□ 0.29
TGFB1-204ENST00000600196 PER1O15534 1290 aaPredicted RBP16.88■□□□□ 0.29
TGFB1-204ENST00000600196 POLR3GLQ9BT43 218 aa16.88■□□□□ 0.29
TGFB1-204ENST00000600196 A0A1W2PP64 1363 aa16.88■□□□□ 0.29
TGFB1-204ENST00000600196 ROBO1Q9Y6N7 1651 aa16.86■□□□□ 0.29
TGFB1-204ENST00000600196 KNSTRNQ9Y448 316 aa16.86■□□□□ 0.29
TGFB1-204ENST00000600196 CGNL1Q0VF96 1302 aa16.86■□□□□ 0.29
TGFB1-204ENST00000600196 NSD2O96028 1365 aa16.86■□□□□ 0.29
TGFB1-204ENST00000600196 NHSL1Q5SYE7 1610 aa16.85■□□□□ 0.29
TGFB1-204ENST00000600196 MYOM1P52179 1685 aa16.85■□□□□ 0.29
TGFB1-204ENST00000600196 PIP4K2BP78356 416 aa16.85■□□□□ 0.29
TGFB1-204ENST00000600196 TTC21BQ7Z4L5 1316 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms