RNA–Protein interactions for RNA: ENST00000599808.1

HOMER3-211, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 555 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-211ENST00000599808 VGFO15240 615 aaPredicted RBP18.76■□□□□ 0.59
HOMER3-211ENST00000599808 MYOM2P54296 1465 aa18.74■□□□□ 0.59
HOMER3-211ENST00000599808 HFM1A2PYH4 1435 aa18.74■□□□□ 0.59
HOMER3-211ENST00000599808 NAIPQ13075 1403 aa18.74■□□□□ 0.59
HOMER3-211ENST00000599808 CDC42BPGQ6DT37 1551 aa18.72■□□□□ 0.59
HOMER3-211ENST00000599808 BCL9LQ86UU0 1499 aa18.71■□□□□ 0.59
HOMER3-211ENST00000599808 PXDNQ92626 1479 aa18.71■□□□□ 0.59
HOMER3-211ENST00000599808 RPGRIP1LQ68CZ1 1315 aa18.71■□□□□ 0.59
HOMER3-211ENST00000599808 ESCO1Q5FWF5 840 aa18.7■□□□□ 0.58
HOMER3-211ENST00000599808 NPHP3Q7Z494 1330 aa18.7■□□□□ 0.58
HOMER3-211ENST00000599808 ZRANB1Q9UGI0 708 aa18.68■□□□□ 0.58
HOMER3-211ENST00000599808 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.67■□□□□ 0.58
HOMER3-211ENST00000599808 XPCQ01831 940 aaPredicted RBP18.67■□□□□ 0.58
HOMER3-211ENST00000599808 RRBP1Q9P2E9 1410 aaKnown RBP18.66■□□□□ 0.58
HOMER3-211ENST00000599808 FOXO3O43524 673 aa18.66■□□□□ 0.58
HOMER3-211ENST00000599808 FOXD1Q16676 465 aa18.65■□□□□ 0.58
HOMER3-211ENST00000599808 GJD4Q96KN9 370 aaPredicted RBP18.65■□□□□ 0.58
HOMER3-211ENST00000599808 CCDC125Q86Z20 511 aa18.64■□□□□ 0.57
HOMER3-211ENST00000599808 SLC4A1APQ9BWU0 796 aaKnown RBP18.63■□□□□ 0.57
HOMER3-211ENST00000599808 GLI3P10071 1580 aa18.63■□□□□ 0.57
HOMER3-211ENST00000599808 BRWD3Q6RI45 1802 aa18.63■□□□□ 0.57
HOMER3-211ENST00000599808 NUTM2FA1L443 756 aa18.62■□□□□ 0.57
HOMER3-211ENST00000599808 WAPLQ7Z5K2 1190 aa18.62■□□□□ 0.57
HOMER3-211ENST00000599808 ADGRF5Q8IZF2 1346 aa18.62■□□□□ 0.57
HOMER3-211ENST00000599808 KNDC1Q76NI1 1749 aa18.61■□□□□ 0.57
HOMER3-211ENST00000599808 FMN2Q9NZ56 1722 aa18.61■□□□□ 0.57
HOMER3-211ENST00000599808 IFT172Q9UG01 1749 aa18.61■□□□□ 0.57
HOMER3-211ENST00000599808 TECPR2O15040 1411 aa18.61■□□□□ 0.57
HOMER3-211ENST00000599808 LRPPRCP42704 1394 aaKnown RBP18.61■□□□□ 0.57
HOMER3-211ENST00000599808 SLIT2O94813 1529 aa18.6■□□□□ 0.57
HOMER3-211ENST00000599808 STK26Q9P289 416 aa18.6■□□□□ 0.57
HOMER3-211ENST00000599808 RALGAPBQ86X10 1494 aa18.59■□□□□ 0.57
HOMER3-211ENST00000599808 UNC5CLQ8IV45 518 aa18.59■□□□□ 0.57
HOMER3-211ENST00000599808 KIF1AQ12756 1690 aa18.59■□□□□ 0.57
HOMER3-211ENST00000599808 RGPD8O14715 1765 aaPredicted RBP18.58■□□□□ 0.57
HOMER3-211ENST00000599808 PLEKHH1Q9ULM0 1364 aa18.58■□□□□ 0.57
HOMER3-211ENST00000599808 USP32Q8NFA0 1604 aa18.58■□□□□ 0.56
HOMER3-211ENST00000599808 SPATA31A3Q5VYP0 1347 aa18.57■□□□□ 0.56
HOMER3-211ENST00000599808 BLMP54132 1417 aaPredicted RBP18.57■□□□□ 0.56
HOMER3-211ENST00000599808 ABCC11Q96J66 1382 aa18.56■□□□□ 0.56
HOMER3-211ENST00000599808 TMEM132EQ6IEE7 984 aa18.56■□□□□ 0.56
HOMER3-211ENST00000599808 SPATA31E1Q6ZUB1 1445 aa18.56■□□□□ 0.56
HOMER3-211ENST00000599808 RGL3Q3MIN7 710 aa18.55■□□□□ 0.56
HOMER3-211ENST00000599808 CCDC144AA2RUR9 1427 aa18.54■□□□□ 0.56
HOMER3-211ENST00000599808 ANKRD30BQ9BXX2 1392 aa18.54■□□□□ 0.56
HOMER3-211ENST00000599808 PLCH1Q4KWH8 1693 aa18.54■□□□□ 0.56
HOMER3-211ENST00000599808 KRT28Q7Z3Y7 464 aa18.53■□□□□ 0.56
HOMER3-211ENST00000599808 DEFB132Q7Z7B7 95 aa18.53■□□□□ 0.56
HOMER3-211ENST00000599808 NWD2Q9ULI1 1742 aa18.52■□□□□ 0.56
HOMER3-211ENST00000599808 PIK3C2GO75747 1445 aa18.52■□□□□ 0.56
HOMER3-211ENST00000599808 ABCA3Q99758 1704 aa18.52■□□□□ 0.55
HOMER3-211ENST00000599808 YTHDC2Q9H6S0 1430 aaKnown RBP18.51■□□□□ 0.55
HOMER3-211ENST00000599808 SEPT12Q8IYM1 358 aa18.51■□□□□ 0.55
HOMER3-211ENST00000599808 TNS3Q68CZ2 1445 aa18.5■□□□□ 0.55
HOMER3-211ENST00000599808 VPS72Q15906 364 aa18.49■□□□□ 0.55
HOMER3-211ENST00000599808 CABLES1Q8TDN4 633 aa18.49■□□□□ 0.55
HOMER3-211ENST00000599808 HAP1P54257 671 aaPredicted RBP18.48■□□□□ 0.55
HOMER3-211ENST00000599808 PHF8Q9UPP1 1060 aa18.48■□□□□ 0.55
HOMER3-211ENST00000599808 LRP5O75197 1615 aa18.46■□□□□ 0.55
HOMER3-211ENST00000599808 ONECUT3O60422 494 aaPredicted RBP18.46■□□□□ 0.55
HOMER3-211ENST00000599808 PLEKHG5O94827 1062 aa18.46■□□□□ 0.55
HOMER3-211ENST00000599808 SF3B2Q13435 895 aaKnown RBP18.46■□□□□ 0.55
HOMER3-211ENST00000599808 SIRT1Q96EB6 747 aa18.46■□□□□ 0.55
HOMER3-211ENST00000599808 NRXN1Q9ULB1 1477 aa18.46■□□□□ 0.54
HOMER3-211ENST00000599808 PSME1Q06323 249 aa18.45■□□□□ 0.54
HOMER3-211ENST00000599808 CCDC9Q9Y3X0 531 aaKnown RBP18.45■□□□□ 0.54
HOMER3-211ENST00000599808 SBNO1A3KN83 1393 aa18.44■□□□□ 0.54
HOMER3-211ENST00000599808 KRT27Q7Z3Y8 459 aa18.44■□□□□ 0.54
HOMER3-211ENST00000599808 MPHOSPH9Q99550 1183 aa18.44■□□□□ 0.54
HOMER3-211ENST00000599808 NRAPQ86VF7 1730 aa18.43■□□□□ 0.54
HOMER3-211ENST00000599808 LMOD2Q6P5Q4 547 aa18.43■□□□□ 0.54
HOMER3-211ENST00000599808 C14orf93Q9H972 538 aaKnown RBP18.43■□□□□ 0.54
HOMER3-211ENST00000599808 ARHGEF10O15013 1369 aa18.42■□□□□ 0.54
HOMER3-211ENST00000599808 FAM83GA6ND36 823 aa18.41■□□□□ 0.54
HOMER3-211ENST00000599808 TRPM3Q9HCF6 1732 aaPredicted RBP18.4■□□□□ 0.54
HOMER3-211ENST00000599808 SAFB2Q14151 953 aaKnown RBP eCLIP18.4■□□□□ 0.54
HOMER3-211ENST00000599808 CFAP70Q5T0N1 1121 aa18.4■□□□□ 0.54
HOMER3-211ENST00000599808 DHX57Q6P158 1386 aaKnown RBP18.4■□□□□ 0.54
HOMER3-211ENST00000599808 PRAM1Q96QH2 718 aa18.39■□□□□ 0.53
HOMER3-211ENST00000599808 ALS2Q96Q42 1657 aa18.38■□□□□ 0.53
HOMER3-211ENST00000599808 PMFBP1Q8TBY8 1022 aa18.38■□□□□ 0.53
HOMER3-211ENST00000599808 A0A0G2JS52 829 aa18.37■□□□□ 0.53
HOMER3-211ENST00000599808 PSDA5PKW4 1024 aaPredicted RBP18.37■□□□□ 0.53
HOMER3-211ENST00000599808 MYT1Q01538 1121 aa18.37■□□□□ 0.53
HOMER3-211ENST00000599808 FAM98CQ17RN3 349 aaKnown RBP18.37■□□□□ 0.53
HOMER3-211ENST00000599808 ANKARQ7Z5J8 1434 aa18.37■□□□□ 0.53
HOMER3-211ENST00000599808 ADGRB2O60241 1585 aa18.37■□□□□ 0.53
HOMER3-211ENST00000599808 COL14A1Q05707 1796 aaKnown RBP18.37■□□□□ 0.53
HOMER3-211ENST00000599808 RGPD1P0DJD0 1748 aa18.36■□□□□ 0.53
HOMER3-211ENST00000599808 BAG6P46379 1132 aa18.36■□□□□ 0.53
HOMER3-211ENST00000599808 DLC1Q96QB1 1528 aa18.36■□□□□ 0.53
HOMER3-211ENST00000599808 HRCP23327 699 aa18.35■□□□□ 0.53
HOMER3-211ENST00000599808 BTG4Q9NY30 223 aa18.35■□□□□ 0.53
HOMER3-211ENST00000599808 CRYBG1Q9Y4K1 1723 aa18.35■□□□□ 0.53
HOMER3-211ENST00000599808 POGKQ9P215 609 aa18.33■□□□□ 0.52
HOMER3-211ENST00000599808 TNS1Q9HBL0 1735 aaKnown RBP18.32■□□□□ 0.52
HOMER3-211ENST00000599808 EN1Q05925 392 aaPredicted RBP18.32■□□□□ 0.52
HOMER3-211ENST00000599808 THSD7AQ9UPZ6 1657 aa18.31■□□□□ 0.52
HOMER3-211ENST00000599808 ADGRB1O14514 1584 aa18.31■□□□□ 0.52
HOMER3-211ENST00000599808 FAM182BQ5T319 152 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms