RNA–Protein interactions for RNA: ENST00000599642.1

KHSRP-211, Transcript of KH-type splicing regulatory protein, humanhuman

TSL 2

Gene KHSRP, Length 428 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHSRP-211ENST00000599642 PROSER2Q86WR7 435 aaPredicted RBP25.99■■□□□ 1.75
KHSRP-211ENST00000599642 DCCP43146 1447 aa25.98■■□□□ 1.75
KHSRP-211ENST00000599642 ADGRL3Q9HAR2 1447 aa25.98■■□□□ 1.75
KHSRP-211ENST00000599642 XIRP1Q702N8 1843 aaKnown RBP25.98■■□□□ 1.75
KHSRP-211ENST00000599642 ZNF335Q9H4Z2 1342 aaPredicted RBP25.98■■□□□ 1.75
KHSRP-211ENST00000599642 NALCNQ8IZF0 1738 aa25.98■■□□□ 1.75
KHSRP-211ENST00000599642 CDC42BPGQ6DT37 1551 aa25.98■■□□□ 1.75
KHSRP-211ENST00000599642 LRRC7Q96NW7 1537 aa25.98■■□□□ 1.75
KHSRP-211ENST00000599642 WAPLQ7Z5K2 1190 aa25.97■■□□□ 1.75
KHSRP-211ENST00000599642 PLEKHH1Q9ULM0 1364 aa25.96■■□□□ 1.75
KHSRP-211ENST00000599642 EVC2Q86UK5 1308 aa25.96■■□□□ 1.75
KHSRP-211ENST00000599642 IQSEC2Q5JU85 1478 aa25.93■■□□□ 1.74
KHSRP-211ENST00000599642 C19orf44Q9H6X5 657 aa25.92■■□□□ 1.74
KHSRP-211ENST00000599642 TMEM94Q12767 1356 aa25.92■■□□□ 1.74
KHSRP-211ENST00000599642 TULP4Q9NRJ4 1543 aa25.91■■□□□ 1.74
KHSRP-211ENST00000599642 FMN2Q9NZ56 1722 aa25.91■■□□□ 1.74
KHSRP-211ENST00000599642 ITSN1Q15811 1721 aa25.89■■□□□ 1.74
KHSRP-211ENST00000599642 WASLO00401 505 aaPredicted RBP25.89■■□□□ 1.74
KHSRP-211ENST00000599642 MSH6P52701 1360 aa25.88■■□□□ 1.73
KHSRP-211ENST00000599642 ZNF316A6NFI3 1004 aaPredicted RBP25.88■■□□□ 1.73
KHSRP-211ENST00000599642 ANKARQ7Z5J8 1434 aa25.88■■□□□ 1.73
KHSRP-211ENST00000599642 MINK1Q8N4C8 1332 aaPredicted RBP25.88■■□□□ 1.73
KHSRP-211ENST00000599642 ATAD2Q6PL18 1390 aa25.87■■□□□ 1.73
KHSRP-211ENST00000599642 NINLQ9Y2I6 1382 aa25.87■■□□□ 1.73
KHSRP-211ENST00000599642 SAFB2Q14151 953 aaKnown RBP eCLIP25.86■■□□□ 1.73
KHSRP-211ENST00000599642 CADPS2Q86UW7 1296 aa25.84■■□□□ 1.73
KHSRP-211ENST00000599642 DISP3Q9P2K9 1392 aa25.83■■□□□ 1.73
KHSRP-211ENST00000599642 C14orf37Q86TY3 774 aa25.83■■□□□ 1.73
KHSRP-211ENST00000599642 CDK19Q9BWU1 502 aa25.82■■□□□ 1.72
KHSRP-211ENST00000599642 TOPAZ1Q8N9V7 1692 aa25.81■■□□□ 1.72
KHSRP-211ENST00000599642 HIRIP3Q9BW71 556 aaPredicted RBP25.81■■□□□ 1.72
KHSRP-211ENST00000599642 CCDC7Q96M83 1385 aa25.81■■□□□ 1.72
KHSRP-211ENST00000599642 ATF3P18847 181 aa25.79■■□□□ 1.72
KHSRP-211ENST00000599642 SRPK2P78362 688 aaKnown RBP25.79■■□□□ 1.72
KHSRP-211ENST00000599642 KIF7Q2M1P5 1343 aa25.79■■□□□ 1.72
KHSRP-211ENST00000599642 USP32Q8NFA0 1604 aa25.78■■□□□ 1.72
KHSRP-211ENST00000599642 ATP7BP35670 1465 aa25.78■■□□□ 1.72
KHSRP-211ENST00000599642 CCDC61Q9Y6R9 512 aa25.77■■□□□ 1.72
KHSRP-211ENST00000599642 WASHC2AQ641Q2 1341 aa25.76■■□□□ 1.71
KHSRP-211ENST00000599642 MYOM1P52179 1685 aa25.76■■□□□ 1.71
KHSRP-211ENST00000599642 RGPD8O14715 1765 aaPredicted RBP25.76■■□□□ 1.71
KHSRP-211ENST00000599642 KIF1AQ12756 1690 aa25.75■■□□□ 1.71
KHSRP-211ENST00000599642 C11orf95C9JLR9 678 aaPredicted RBP25.75■■□□□ 1.71
KHSRP-211ENST00000599642 NUDT16Q96DE0 195 aaKnown RBP25.73■■□□□ 1.71
KHSRP-211ENST00000599642 MST1RQ04912 1400 aa25.72■■□□□ 1.71
KHSRP-211ENST00000599642 CABP2Q9NPB3 220 aa25.72■■□□□ 1.71
KHSRP-211ENST00000599642 RBM33Q96EV2 1170 aaKnown RBP25.71■■□□□ 1.71
KHSRP-211ENST00000599642 PLEKHG3A1L390 1219 aa25.7■■□□□ 1.7
KHSRP-211ENST00000599642 C1orf167Q5SNV9 1468 aa25.7■■□□□ 1.7
KHSRP-211ENST00000599642 AKAP12Q02952 1782 aa25.69■■□□□ 1.7
KHSRP-211ENST00000599642 PPIP5K1Q6PFW1 1433 aa25.68■■□□□ 1.7
KHSRP-211ENST00000599642 PRR36Q9H6K5 1346 aa25.67■■□□□ 1.7
KHSRP-211ENST00000599642 BRD4O60885 1362 aaPredicted RBP25.67■■□□□ 1.7
KHSRP-211ENST00000599642 CERKQ8TCT0 537 aa25.66■■□□□ 1.7
KHSRP-211ENST00000599642 ZNF692Q9BU19 519 aaPredicted RBP25.66■■□□□ 1.7
KHSRP-211ENST00000599642 ANKRD36BQ8N2N9 1353 aa25.66■■□□□ 1.7
KHSRP-211ENST00000599642 TERF2IPQ9NYB0 399 aa25.65■■□□□ 1.7
KHSRP-211ENST00000599642 POLR3AO14802 1390 aaPredicted RBP25.65■■□□□ 1.7
KHSRP-211ENST00000599642 MON2Q7Z3U7 1717 aa25.64■■□□□ 1.7
KHSRP-211ENST00000599642 TOM1O60784 492 aa25.64■■□□□ 1.7
KHSRP-211ENST00000599642 SLAIN2Q9P270 581 aa25.63■■□□□ 1.69
KHSRP-211ENST00000599642 CPSF1Q10570 1443 aaKnown RBP25.63■■□□□ 1.69
KHSRP-211ENST00000599642 HDGFL2Q7Z4V5 671 aaPredicted RBP25.61■■□□□ 1.69
KHSRP-211ENST00000599642 CABP1Q9NZU7 370 aa25.61■■□□□ 1.69
KHSRP-211ENST00000599642 PHF8Q9UPP1 1060 aa25.61■■□□□ 1.69
KHSRP-211ENST00000599642 TMC1Q8TDI8 760 aa25.6■■□□□ 1.69
KHSRP-211ENST00000599642 POLR3GLQ9BT43 218 aa25.59■■□□□ 1.69
KHSRP-211ENST00000599642 CD163L1Q9NR16 1453 aa25.59■■□□□ 1.69
KHSRP-211ENST00000599642 ESCO1Q5FWF5 840 aa25.58■■□□□ 1.69
KHSRP-211ENST00000599642 SLC12A5Q9H2X9 1139 aa25.58■■□□□ 1.69
KHSRP-211ENST00000599642 NHSL1Q5SYE7 1610 aa25.56■■□□□ 1.68
KHSRP-211ENST00000599642 NUTM2FA1L443 756 aa25.55■■□□□ 1.68
KHSRP-211ENST00000599642 ACEP12821 1306 aa25.55■■□□□ 1.68
KHSRP-211ENST00000599642 A0A1W2PP64 1363 aa25.55■■□□□ 1.68
KHSRP-211ENST00000599642 NRKQ7Z2Y5 1582 aa25.54■■□□□ 1.68
KHSRP-211ENST00000599642 NPHP3Q7Z494 1330 aa25.54■■□□□ 1.68
KHSRP-211ENST00000599642 ROBO1Q9Y6N7 1651 aa25.54■■□□□ 1.68
KHSRP-211ENST00000599642 EDC4Q6P2E9 1401 aaKnown RBP25.54■■□□□ 1.68
KHSRP-211ENST00000599642 NGDNQ8NEJ9 315 aaKnown RBP25.53■■□□□ 1.68
KHSRP-211ENST00000599642 PANK3Q9H999 370 aa25.53■■□□□ 1.68
KHSRP-211ENST00000599642 USP6P35125 1406 aa25.53■■□□□ 1.68
KHSRP-211ENST00000599642 BRINP3Q76B58 766 aa25.52■■□□□ 1.68
KHSRP-211ENST00000599642 KTN1Q86UP2 1357 aaKnown RBP25.52■■□□□ 1.68
KHSRP-211ENST00000599642 ORAI2Q96SN7 254 aa25.51■■□□□ 1.67
KHSRP-211ENST00000599642 NPC1L1Q9UHC9 1359 aa25.51■■□□□ 1.67
KHSRP-211ENST00000599642 AHDC1Q5TGY3 1603 aaPredicted RBP25.51■■□□□ 1.67
KHSRP-211ENST00000599642 DDX10Q13206 875 aaKnown RBP25.5■■□□□ 1.67
KHSRP-211ENST00000599642 SSH2Q76I76 1423 aa25.49■■□□□ 1.67
KHSRP-211ENST00000599642 TTC21AQ8NDW8 1320 aa25.49■■□□□ 1.67
KHSRP-211ENST00000599642 PER1O15534 1290 aaPredicted RBP25.49■■□□□ 1.67
KHSRP-211ENST00000599642 PSME1Q06323 249 aa25.49■■□□□ 1.67
KHSRP-211ENST00000599642 NSD2O96028 1365 aa25.48■■□□□ 1.67
KHSRP-211ENST00000599642 PMFBP1Q8TBY8 1022 aa25.48■■□□□ 1.67
KHSRP-211ENST00000599642 KIF20BQ96Q89 1820 aa25.48■■□□□ 1.67
KHSRP-211ENST00000599642 TRPM3Q9HCF6 1732 aaPredicted RBP25.48■■□□□ 1.67
KHSRP-211ENST00000599642 KNSTRNQ9Y448 316 aa25.47■■□□□ 1.67
KHSRP-211ENST00000599642 USP54Q70EL1 1684 aa25.47■■□□□ 1.67
KHSRP-211ENST00000599642 ANKRD26Q9UPS8 1709 aa25.46■■□□□ 1.67
KHSRP-211ENST00000599642 SBNO1A3KN83 1393 aa25.46■■□□□ 1.67
KHSRP-211ENST00000599642 UBAP1LF5GYI3 381 aa25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms