RNA–Protein interactions for RNA: ENST00000599476.1

GRAMD1A-210, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-210ENST00000599476 PTCH1Q13635 1447 aa11.41□□□□□ -0.58
GRAMD1A-210ENST00000599476 ROBO2Q9HCK4 1378 aa11.41□□□□□ -0.58
GRAMD1A-210ENST00000599476 YTHDC2Q9H6S0 1430 aaKnown RBP11.4□□□□□ -0.58
GRAMD1A-210ENST00000599476 XRN1Q8IZH2 1706 aaKnown RBP11.4□□□□□ -0.58
GRAMD1A-210ENST00000599476 TECPR2O15040 1411 aa11.39□□□□□ -0.59
GRAMD1A-210ENST00000599476 HSPA5P11021 654 aaKnown RBP11.39□□□□□ -0.59
GRAMD1A-210ENST00000599476 DCCP43146 1447 aa11.39□□□□□ -0.59
GRAMD1A-210ENST00000599476 XIRP1Q702N8 1843 aaKnown RBP11.39□□□□□ -0.59
GRAMD1A-210ENST00000599476 DIEXFQ68CQ4 756 aaKnown RBP11.38□□□□□ -0.59
GRAMD1A-210ENST00000599476 WAPLQ7Z5K2 1190 aa11.38□□□□□ -0.59
GRAMD1A-210ENST00000599476 USP47Q96K76 1375 aa11.38□□□□□ -0.59
GRAMD1A-210ENST00000599476 ADGRL3Q9HAR2 1447 aa11.37□□□□□ -0.59
GRAMD1A-210ENST00000599476 HIRIP3Q9BW71 556 aaPredicted RBP11.37□□□□□ -0.59
GRAMD1A-210ENST00000599476 LAMC1P11047 1609 aa11.36□□□□□ -0.59
GRAMD1A-210ENST00000599476 POGKQ9P215 609 aa11.36□□□□□ -0.59
GRAMD1A-210ENST00000599476 ADRA2BP18089 450 aa11.35□□□□□ -0.59
GRAMD1A-210ENST00000599476 PRAM1Q96QH2 718 aa11.35□□□□□ -0.59
GRAMD1A-210ENST00000599476 ZRANB1Q9UGI0 708 aa11.35□□□□□ -0.59
GRAMD1A-210ENST00000599476 TRAK1Q9UPV9 953 aa11.35□□□□□ -0.59
GRAMD1A-210ENST00000599476 EIF3AQ14152 1382 aaKnown RBP11.35□□□□□ -0.59
GRAMD1A-210ENST00000599476 TRPM1Q7Z4N2 1603 aa11.35□□□□□ -0.59
GRAMD1A-210ENST00000599476 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.34□□□□□ -0.59
GRAMD1A-210ENST00000599476 ASXL1Q8IXJ9 1541 aa11.34□□□□□ -0.59
GRAMD1A-210ENST00000599476 GPRASP1Q5JY77 1395 aa11.33□□□□□ -0.6
GRAMD1A-210ENST00000599476 NBPF1Q3BBV0 1214 aa11.33□□□□□ -0.6
GRAMD1A-210ENST00000599476 BRINP3Q76B58 766 aa11.33□□□□□ -0.6
GRAMD1A-210ENST00000599476 ADGRB1O14514 1584 aa11.33□□□□□ -0.6
GRAMD1A-210ENST00000599476 PLEKHH1Q9ULM0 1364 aa11.32□□□□□ -0.6
GRAMD1A-210ENST00000599476 DLC1Q96QB1 1528 aa11.32□□□□□ -0.6
GRAMD1A-210ENST00000599476 MST1RQ04912 1400 aa11.32□□□□□ -0.6
GRAMD1A-210ENST00000599476 SAFB2Q14151 953 aaKnown RBP eCLIP11.31□□□□□ -0.6
GRAMD1A-210ENST00000599476 POLR3GLQ9BT43 218 aa11.31□□□□□ -0.6
GRAMD1A-210ENST00000599476 KIAA1210Q9ULL0 1709 aa11.31□□□□□ -0.6
GRAMD1A-210ENST00000599476 ST20-MTHFSA0A0A6YYL1 179 aa11.3□□□□□ -0.6
GRAMD1A-210ENST00000599476 SLC24A1O60721 1099 aa11.3□□□□□ -0.6
GRAMD1A-210ENST00000599476 C1orf167Q5SNV9 1468 aa11.3□□□□□ -0.6
GRAMD1A-210ENST00000599476 KNDC1Q76NI1 1749 aa11.29□□□□□ -0.6
GRAMD1A-210ENST00000599476 ESCO1Q5FWF5 840 aa11.29□□□□□ -0.6
GRAMD1A-210ENST00000599476 ROBO1Q9Y6N7 1651 aa11.28□□□□□ -0.6
GRAMD1A-210ENST00000599476 DDX10Q13206 875 aaKnown RBP11.28□□□□□ -0.6
GRAMD1A-210ENST00000599476 LRRC59Q96AG4 307 aaKnown RBP11.28□□□□□ -0.6
GRAMD1A-210ENST00000599476 ORAI2Q96SN7 254 aa11.28□□□□□ -0.6
GRAMD1A-210ENST00000599476 WASLO00401 505 aaPredicted RBP11.27□□□□□ -0.61
GRAMD1A-210ENST00000599476 TMF1P82094 1093 aa11.27□□□□□ -0.61
GRAMD1A-210ENST00000599476 CDCA8Q53HL2 280 aa11.27□□□□□ -0.61
GRAMD1A-210ENST00000599476 MINK1Q8N4C8 1332 aaPredicted RBP11.27□□□□□ -0.61
GRAMD1A-210ENST00000599476 NALCNQ8IZF0 1738 aa11.26□□□□□ -0.61
GRAMD1A-210ENST00000599476 CDC42BPGQ6DT37 1551 aa11.26□□□□□ -0.61
GRAMD1A-210ENST00000599476 NUTM2FA1L443 756 aa11.26□□□□□ -0.61
GRAMD1A-210ENST00000599476 CCDC7Q96M83 1385 aa11.26□□□□□ -0.61
GRAMD1A-210ENST00000599476 JCADQ9P266 1359 aa11.26□□□□□ -0.61
GRAMD1A-210ENST00000599476 RXRBP28702 533 aa11.25□□□□□ -0.61
GRAMD1A-210ENST00000599476 ZNF772Q68DY9 489 aaPredicted RBP11.25□□□□□ -0.61
GRAMD1A-210ENST00000599476 NPHP3Q7Z494 1330 aa11.25□□□□□ -0.61
GRAMD1A-210ENST00000599476 CENPJQ9HC77 1338 aaPredicted RBP11.25□□□□□ -0.61
GRAMD1A-210ENST00000599476 FOXO3O43524 673 aa11.24□□□□□ -0.61
GRAMD1A-210ENST00000599476 CDK19Q9BWU1 502 aa11.24□□□□□ -0.61
GRAMD1A-210ENST00000599476 PHF8Q9UPP1 1060 aa11.24□□□□□ -0.61
GRAMD1A-210ENST00000599476 SOS2Q07890 1332 aaPredicted RBP11.24□□□□□ -0.61
GRAMD1A-210ENST00000599476 WASHC2AQ641Q2 1341 aa11.24□□□□□ -0.61
GRAMD1A-210ENST00000599476 ANKARQ7Z5J8 1434 aa11.24□□□□□ -0.61
GRAMD1A-210ENST00000599476 AHDC1Q5TGY3 1603 aaPredicted RBP11.24□□□□□ -0.61
GRAMD1A-210ENST00000599476 DDX17Q92841 729 aaKnown RBP11.23□□□□□ -0.61
GRAMD1A-210ENST00000599476 KIF7Q2M1P5 1343 aa11.23□□□□□ -0.61
GRAMD1A-210ENST00000599476 PSME1Q06323 249 aa11.22□□□□□ -0.61
GRAMD1A-210ENST00000599476 SPATA31A6Q5VVP1 1343 aa11.22□□□□□ -0.61
GRAMD1A-210ENST00000599476 NUDT16Q96DE0 195 aaKnown RBP11.22□□□□□ -0.61
GRAMD1A-210ENST00000599476 ANP32CO43423 234 aa11.21□□□□□ -0.61
GRAMD1A-210ENST00000599476 CCDC61Q9Y6R9 512 aa11.21□□□□□ -0.61
GRAMD1A-210ENST00000599476 PHLPP1O60346 1717 aa11.21□□□□□ -0.62
GRAMD1A-210ENST00000599476 ADGRB2O60241 1585 aa11.2□□□□□ -0.62
GRAMD1A-210ENST00000599476 EVC2Q86UK5 1308 aa11.2□□□□□ -0.62
GRAMD1A-210ENST00000599476 YY1P25490 414 aa11.2□□□□□ -0.62
GRAMD1A-210ENST00000599476 KRT28Q7Z3Y7 464 aa11.2□□□□□ -0.62
GRAMD1A-210ENST00000599476 CDK12Q9NYV4 1490 aaPredicted RBP11.19□□□□□ -0.62
GRAMD1A-210ENST00000599476 PRR36Q9H6K5 1346 aa11.19□□□□□ -0.62
GRAMD1A-210ENST00000599476 ARHGEF28Q8N1W1 1705 aaKnown RBP11.19□□□□□ -0.62
GRAMD1A-210ENST00000599476 FMN2Q9NZ56 1722 aa11.19□□□□□ -0.62
GRAMD1A-210ENST00000599476 C11orf95C9JLR9 678 aaPredicted RBP11.19□□□□□ -0.62
GRAMD1A-210ENST00000599476 SRPK2P78362 688 aaKnown RBP11.19□□□□□ -0.62
GRAMD1A-210ENST00000599476 NGDNQ8NEJ9 315 aaKnown RBP11.19□□□□□ -0.62
GRAMD1A-210ENST00000599476 PMFBP1Q8TBY8 1022 aa11.19□□□□□ -0.62
GRAMD1A-210ENST00000599476 TESK2Q96S53 571 aa11.19□□□□□ -0.62
GRAMD1A-210ENST00000599476 COL16A1Q07092 1604 aaPredicted RBP11.18□□□□□ -0.62
GRAMD1A-210ENST00000599476 PLEKHG3A1L390 1219 aa11.18□□□□□ -0.62
GRAMD1A-210ENST00000599476 TULP4Q9NRJ4 1543 aa11.18□□□□□ -0.62
GRAMD1A-210ENST00000599476 NHSL1Q5SYE7 1610 aa11.17□□□□□ -0.62
GRAMD1A-210ENST00000599476 XPCQ01831 940 aaPredicted RBP11.17□□□□□ -0.62
GRAMD1A-210ENST00000599476 CABP2Q9NPB3 220 aa11.17□□□□□ -0.62
GRAMD1A-210ENST00000599476 PNPLA6Q8IY17 1366 aa11.16□□□□□ -0.62
GRAMD1A-210ENST00000599476 SBNO2Q9Y2G9 1366 aa11.16□□□□□ -0.62
GRAMD1A-210ENST00000599476 SPATA31A3Q5VYP0 1347 aa11.16□□□□□ -0.62
GRAMD1A-210ENST00000599476 MIER1Q8N108 512 aa11.16□□□□□ -0.62
GRAMD1A-210ENST00000599476 PUS7Q96PZ0 661 aaKnown RBP11.16□□□□□ -0.62
GRAMD1A-210ENST00000599476 QRICH2Q9H0J4 1663 aa11.16□□□□□ -0.62
GRAMD1A-210ENST00000599476 SBNO1A3KN83 1393 aa11.16□□□□□ -0.62
GRAMD1A-210ENST00000599476 PXDNQ92626 1479 aa11.15□□□□□ -0.62
GRAMD1A-210ENST00000599476 NUTM2BA6NNL0 878 aaPredicted RBP11.15□□□□□ -0.62
GRAMD1A-210ENST00000599476 NUTM2EB1AL46 878 aaPredicted RBP11.15□□□□□ -0.62
GRAMD1A-210ENST00000599476 MEX3CQ5U5Q3 659 aaKnown RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms