RNA–Protein interactions for RNA: ENST00000599373.5

DDX49-209, Transcript of DEAD-box helicase 49, humanhuman

TSL 3

Gene DDX49, Length 772 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-209ENST00000599373 C1orf167Q5SNV9 1468 aa24.75■■□□□ 1.55
DDX49-209ENST00000599373 FNBP4Q8N3X1 1017 aaPredicted RBP24.74■■□□□ 1.55
DDX49-209ENST00000599373 NUP155O75694 1391 aa24.74■■□□□ 1.55
DDX49-209ENST00000599373 ATRNO75882 1429 aa24.74■■□□□ 1.55
DDX49-209ENST00000599373 IQGAP3Q86VI3 1631 aa24.74■■□□□ 1.55
DDX49-209ENST00000599373 ORAI2Q96SN7 254 aa24.73■■□□□ 1.55
DDX49-209ENST00000599373 LAMC1P11047 1609 aa24.72■■□□□ 1.55
DDX49-209ENST00000599373 SOS2Q07890 1332 aaPredicted RBP24.72■■□□□ 1.55
DDX49-209ENST00000599373 TONSLQ96HA7 1378 aa24.7■■□□□ 1.55
DDX49-209ENST00000599373 ANKRD30BQ9BXX2 1392 aa24.69■■□□□ 1.54
DDX49-209ENST00000599373 ZNF326Q5BKZ1 582 aaKnown RBP24.69■■□□□ 1.54
DDX49-209ENST00000599373 PTCH1Q13635 1447 aa24.68■■□□□ 1.54
DDX49-209ENST00000599373 BCL9LQ86UU0 1499 aa24.65■■□□□ 1.54
DDX49-209ENST00000599373 FOXD1Q16676 465 aa24.65■■□□□ 1.54
DDX49-209ENST00000599373 CCDC125Q86Z20 511 aa24.64■■□□□ 1.54
DDX49-209ENST00000599373 COL22A1Q8NFW1 1626 aaPredicted RBP24.64■■□□□ 1.53
DDX49-209ENST00000599373 SLC4A1APQ9BWU0 796 aaKnown RBP24.63■■□□□ 1.53
DDX49-209ENST00000599373 ROBO2Q9HCK4 1378 aa24.61■■□□□ 1.53
DDX49-209ENST00000599373 MYOM2P54296 1465 aa24.61■■□□□ 1.53
DDX49-209ENST00000599373 SPHKAPQ2M3C7 1700 aa24.61■■□□□ 1.53
DDX49-209ENST00000599373 NEXMIFQ5QGS0 1516 aa24.61■■□□□ 1.53
DDX49-209ENST00000599373 GJD4Q96KN9 370 aaPredicted RBP24.58■■□□□ 1.53
DDX49-209ENST00000599373 DEFB132Q7Z7B7 95 aa24.57■■□□□ 1.52
DDX49-209ENST00000599373 MARF1Q9Y4F3 1742 aaKnown RBP24.57■■□□□ 1.52
DDX49-209ENST00000599373 CLTCL1P53675 1640 aa24.54■■□□□ 1.52
DDX49-209ENST00000599373 XPCQ01831 940 aaPredicted RBP24.54■■□□□ 1.52
DDX49-209ENST00000599373 GLI3P10071 1580 aa24.53■■□□□ 1.52
DDX49-209ENST00000599373 BLMP54132 1417 aaPredicted RBP24.52■■□□□ 1.52
DDX49-209ENST00000599373 PXDNQ92626 1479 aa24.52■■□□□ 1.52
DDX49-209ENST00000599373 BRWD3Q6RI45 1802 aa24.51■■□□□ 1.51
DDX49-209ENST00000599373 RALGAPBQ86X10 1494 aa24.5■■□□□ 1.51
DDX49-209ENST00000599373 ESCO1Q5FWF5 840 aa24.49■■□□□ 1.51
DDX49-209ENST00000599373 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.47■■□□□ 1.51
DDX49-209ENST00000599373 LRP5O75197 1615 aa24.47■■□□□ 1.51
DDX49-209ENST00000599373 NPHP3Q7Z494 1330 aa24.47■■□□□ 1.51
DDX49-209ENST00000599373 VGFO15240 615 aaPredicted RBP24.47■■□□□ 1.51
DDX49-209ENST00000599373 FOXO3O43524 673 aa24.47■■□□□ 1.51
DDX49-209ENST00000599373 UNC5CLQ8IV45 518 aa24.46■■□□□ 1.51
DDX49-209ENST00000599373 SLIT2O94813 1529 aa24.45■■□□□ 1.5
DDX49-209ENST00000599373 PRAG1Q86YV5 1406 aa24.44■■□□□ 1.5
DDX49-209ENST00000599373 L3MBTL2Q969R5 705 aa24.44■■□□□ 1.5
DDX49-209ENST00000599373 KIF1BO60333 1816 aa24.42■■□□□ 1.5
DDX49-209ENST00000599373 NUTM2FA1L443 756 aa24.41■■□□□ 1.5
DDX49-209ENST00000599373 PSDA5PKW4 1024 aaPredicted RBP24.41■■□□□ 1.5
DDX49-209ENST00000599373 SEPT12Q8IYM1 358 aa24.4■■□□□ 1.5
DDX49-209ENST00000599373 CDC42BPGQ6DT37 1551 aa24.4■■□□□ 1.5
DDX49-209ENST00000599373 RPGRIP1LQ68CZ1 1315 aa24.38■■□□□ 1.49
DDX49-209ENST00000599373 SF3B2Q13435 895 aaKnown RBP24.37■■□□□ 1.49
DDX49-209ENST00000599373 SPATA31A3Q5VYP0 1347 aa24.35■■□□□ 1.49
DDX49-209ENST00000599373 USP32Q8NFA0 1604 aa24.34■■□□□ 1.49
DDX49-209ENST00000599373 WAPLQ7Z5K2 1190 aa24.33■■□□□ 1.49
DDX49-209ENST00000599373 MIER1Q8N108 512 aa24.32■■□□□ 1.48
DDX49-209ENST00000599373 ONECUT3O60422 494 aaPredicted RBP24.31■■□□□ 1.48
DDX49-209ENST00000599373 VPS72Q15906 364 aa24.31■■□□□ 1.48
DDX49-209ENST00000599373 CABLES1Q8TDN4 633 aa24.31■■□□□ 1.48
DDX49-209ENST00000599373 LRPPRCP42704 1394 aaKnown RBP24.3■■□□□ 1.48
DDX49-209ENST00000599373 PPLO60437 1756 aa24.3■■□□□ 1.48
DDX49-209ENST00000599373 KRT27Q7Z3Y8 459 aa24.3■■□□□ 1.48
DDX49-209ENST00000599373 PLEKHG5O94827 1062 aa24.29■■□□□ 1.48
DDX49-209ENST00000599373 STK26Q9P289 416 aa24.28■■□□□ 1.48
DDX49-209ENST00000599373 PLEKHH1Q9ULM0 1364 aa24.28■■□□□ 1.48
DDX49-209ENST00000599373 PLCH1Q4KWH8 1693 aa24.27■■□□□ 1.48
DDX49-209ENST00000599373 NBPF8Q3BBV2 869 aa24.27■■□□□ 1.48
DDX49-209ENST00000599373 KRT28Q7Z3Y7 464 aa24.27■■□□□ 1.48
DDX49-209ENST00000599373 CCDC9Q9Y3X0 531 aaKnown RBP24.27■■□□□ 1.48
DDX49-209ENST00000599373 FMN2Q9NZ56 1722 aa24.24■■□□□ 1.47
DDX49-209ENST00000599373 BAG6P46379 1132 aa24.24■■□□□ 1.47
DDX49-209ENST00000599373 EN1Q05925 392 aaPredicted RBP24.23■■□□□ 1.47
DDX49-209ENST00000599373 ADGRF5Q8IZF2 1346 aa24.23■■□□□ 1.47
DDX49-209ENST00000599373 NWD2Q9ULI1 1742 aa24.23■■□□□ 1.47
DDX49-209ENST00000599373 CCDC144AA2RUR9 1427 aa24.22■■□□□ 1.47
DDX49-209ENST00000599373 HAP1P54257 671 aaPredicted RBP24.21■■□□□ 1.47
DDX49-209ENST00000599373 R3HDM1Q15032 1099 aaKnown RBP24.21■■□□□ 1.47
DDX49-209ENST00000599373 RGPD8O14715 1765 aaPredicted RBP24.21■■□□□ 1.47
DDX49-209ENST00000599373 KIF1AQ12756 1690 aa24.21■■□□□ 1.47
DDX49-209ENST00000599373 TECPR2O15040 1411 aa24.2■■□□□ 1.46
DDX49-209ENST00000599373 FAM83GA6ND36 823 aa24.2■■□□□ 1.46
DDX49-209ENST00000599373 EIF4G2P78344 907 aaKnown RBP eCLIP24.2■■□□□ 1.46
DDX49-209ENST00000599373 FAM182BQ5T319 152 aa24.2■■□□□ 1.46
DDX49-209ENST00000599373 TMEM132EQ6IEE7 984 aa24.2■■□□□ 1.46
DDX49-209ENST00000599373 ABCA3Q99758 1704 aa24.2■■□□□ 1.46
DDX49-209ENST00000599373 TNS3Q68CZ2 1445 aa24.19■■□□□ 1.46
DDX49-209ENST00000599373 HSPA5P11021 654 aaKnown RBP24.19■■□□□ 1.46
DDX49-209ENST00000599373 A0A0G2JS52 829 aa24.18■■□□□ 1.46
DDX49-209ENST00000599373 MYT1Q01538 1121 aa24.18■■□□□ 1.46
DDX49-209ENST00000599373 FAM98CQ17RN3 349 aaKnown RBP24.18■■□□□ 1.46
DDX49-209ENST00000599373 SPATA31E1Q6ZUB1 1445 aa24.17■■□□□ 1.46
DDX49-209ENST00000599373 ABCC11Q96J66 1382 aa24.16■■□□□ 1.46
DDX49-209ENST00000599373 RGL3Q3MIN7 710 aa24.16■■□□□ 1.46
DDX49-209ENST00000599373 HIRIP3Q9BW71 556 aaPredicted RBP24.16■■□□□ 1.46
DDX49-209ENST00000599373 PHF8Q9UPP1 1060 aa24.15■■□□□ 1.46
DDX49-209ENST00000599373 NRAPQ86VF7 1730 aa24.15■■□□□ 1.46
DDX49-209ENST00000599373 LMOD2Q6P5Q4 547 aa24.14■■□□□ 1.45
DDX49-209ENST00000599373 KNDC1Q76NI1 1749 aa24.14■■□□□ 1.45
DDX49-209ENST00000599373 RGPD1P0DJD0 1748 aa24.13■■□□□ 1.45
DDX49-209ENST00000599373 DDX10Q13206 875 aaKnown RBP24.12■■□□□ 1.45
DDX49-209ENST00000599373 IFT172Q9UG01 1749 aa24.11■■□□□ 1.45
DDX49-209ENST00000599373 PSME1Q06323 249 aa24.11■■□□□ 1.45
DDX49-209ENST00000599373 EZH2Q15910 746 aaKnown RBP24.11■■□□□ 1.45
DDX49-209ENST00000599373 SBNO1A3KN83 1393 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms